RNA–Protein interactions for RNA: ENST00000398969.7

COL13A1-203, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,267 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-203ENST00000398969 MYH3P11055 1940 aa29.54■■■□□ 2.32
COL13A1-203ENST00000398969 KIF2AO00139 706 aaPredicted RBP29.54■■■□□ 2.32
COL13A1-203ENST00000398969 ISM2Q6H9L7 571 aa29.54■■■□□ 2.32
COL13A1-203ENST00000398969 KIF18AQ8NI77 898 aa29.54■■■□□ 2.32
COL13A1-203ENST00000398969 ZNF215Q9UL58 517 aaPredicted RBP29.54■■■□□ 2.32
COL13A1-203ENST00000398969 FAM237AA0A1B0GTK4 181 aa29.54■■■□□ 2.32
COL13A1-203ENST00000398969 ZBTB43O43298 467 aa29.54■■■□□ 2.32
COL13A1-203ENST00000398969 SFPQP23246 707 aaKnown RBP eCLIP29.54■■■□□ 2.32
COL13A1-203ENST00000398969 ATP6V1AP38606 617 aa29.54■■■□□ 2.32
COL13A1-203ENST00000398969 GNL2Q13823 731 aaKnown RBP29.54■■■□□ 2.32
COL13A1-203ENST00000398969 HSD3B7Q9H2F3 369 aa29.54■■■□□ 2.32
COL13A1-203ENST00000398969 LY9Q9HBG7 655 aa29.54■■■□□ 2.32
COL13A1-203ENST00000398969 LOC102724428A0A0B4J2F2 783 aa29.53■■■□□ 2.32
COL13A1-203ENST00000398969 LMOD1P29536 600 aaPredicted RBP29.53■■■□□ 2.32
COL13A1-203ENST00000398969 SIK1P57059 783 aa29.53■■■□□ 2.32
COL13A1-203ENST00000398969 STRBPQ96SI9 672 aaKnown RBP29.53■■■□□ 2.32
COL13A1-203ENST00000398969 RANBP6O60518 1105 aaKnown RBP29.52■■■□□ 2.32
COL13A1-203ENST00000398969 FANCCQ00597 558 aa29.52■■■□□ 2.32
COL13A1-203ENST00000398969 DHX8Q14562 1220 aaKnown RBP29.52■■■□□ 2.32
COL13A1-203ENST00000398969 UTP14CQ5TAP6 766 aaKnown RBP29.52■■■□□ 2.32
COL13A1-203ENST00000398969 SGMS1Q86VZ5 419 aa29.52■■■□□ 2.32
COL13A1-203ENST00000398969 FNBP4Q8N3X1 1017 aaPredicted RBP29.52■■■□□ 2.32
COL13A1-203ENST00000398969 ANKRD36CQ5JPF3 1778 aa29.52■■■□□ 2.32
COL13A1-203ENST00000398969 ERVV-1B6SEH8 477 aa29.52■■■□□ 2.32
COL13A1-203ENST00000398969 UQCRFS1P1P0C7P4 283 aa29.52■■■□□ 2.32
COL13A1-203ENST00000398969 IARSP41252 1262 aaKnown RBP29.52■■■□□ 2.32
COL13A1-203ENST00000398969 KCNJ6P48051 423 aa29.52■■■□□ 2.32
COL13A1-203ENST00000398969 NFXL1Q6ZNB6 911 aa29.52■■■□□ 2.32
COL13A1-203ENST00000398969 DZIP3Q86Y13 1208 aaKnown RBP29.52■■■□□ 2.32
COL13A1-203ENST00000398969 FAM217BQ9NTX9 383 aaPredicted RBP29.52■■■□□ 2.32
COL13A1-203ENST00000398969 TAOK2Q9UL54 1235 aa29.52■■■□□ 2.32
COL13A1-203ENST00000398969 RESP18Q5W5W9 173 aa29.51■■■□□ 2.32
COL13A1-203ENST00000398969 INTS5Q6P9B9 1019 aaKnown RBP29.51■■■□□ 2.32
COL13A1-203ENST00000398969 AIDAQ96BJ3 306 aa29.51■■■□□ 2.32
COL13A1-203ENST00000398969 TRMT112Q9UI30 125 aaKnown RBP29.51■■■□□ 2.32
COL13A1-203ENST00000398969 GOLGA8AA7E2F4 631 aa29.51■■■□□ 2.31
COL13A1-203ENST00000398969 ALX1Q15699 326 aa29.51■■■□□ 2.31
COL13A1-203ENST00000398969 PPP1R13BQ96KQ4 1090 aa29.51■■■□□ 2.31
COL13A1-203ENST00000398969 UBN2Q6ZU65 1347 aa29.5■■■□□ 2.31
COL13A1-203ENST00000398969 PSDA5PKW4 1024 aaPredicted RBP29.5■■■□□ 2.31
COL13A1-203ENST00000398969 KCNQ2O43526 872 aa29.5■■■□□ 2.31
COL13A1-203ENST00000398969 ATP1A3P13637 1013 aa29.5■■■□□ 2.31
COL13A1-203ENST00000398969 EIF5P55010 431 aaKnown RBP29.5■■■□□ 2.31
COL13A1-203ENST00000398969 TMEM67Q5HYA8 995 aa29.5■■■□□ 2.31
COL13A1-203ENST00000398969 MYL10Q9BUA6 226 aa29.5■■■□□ 2.31
COL13A1-203ENST00000398969 GNL3Q9BVP2 549 aaKnown RBP eCLIP29.5■■■□□ 2.31
COL13A1-203ENST00000398969 OGFRQ9NZT2 677 aa29.5■■■□□ 2.31
COL13A1-203ENST00000398969 PNOCQ13519 176 aa29.5■■■□□ 2.31
COL13A1-203ENST00000398969 TRIM29Q14134 588 aa29.5■■■□□ 2.31
COL13A1-203ENST00000398969 BCL11BQ9C0K0 894 aaPredicted RBP29.5■■■□□ 2.31
COL13A1-203ENST00000398969 INCENPQ9NQS7 918 aa29.5■■■□□ 2.31
COL13A1-203ENST00000398969 CCDC87Q9NVE4 849 aa29.5■■■□□ 2.31
COL13A1-203ENST00000398969 PDE8AO60658 829 aa29.49■■■□□ 2.31
COL13A1-203ENST00000398969 ERO1AQ96HE7 468 aa29.49■■■□□ 2.31
COL13A1-203ENST00000398969 CLIC6Q96NY7 704 aa29.49■■■□□ 2.31
COL13A1-203ENST00000398969 EIF4ENIF1Q9NRA8 985 aaKnown RBP29.49■■■□□ 2.31
COL13A1-203ENST00000398969 NUP98P52948 1817 aa29.49■■■□□ 2.31
COL13A1-203ENST00000398969 CRKLP46109 303 aaKnown RBP29.48■■■□□ 2.31
COL13A1-203ENST00000398969 EPB41L4AQ9HCS5 686 aaPredicted RBP29.48■■■□□ 2.31
COL13A1-203ENST00000398969 CUTAO60888 179 aa29.48■■■□□ 2.31
COL13A1-203ENST00000398969 LIFRP42702 1097 aa29.48■■■□□ 2.31
COL13A1-203ENST00000398969 ITPK1Q13572 414 aa29.48■■■□□ 2.31
COL13A1-203ENST00000398969 PUM3Q15397 648 aaKnown RBP29.48■■■□□ 2.31
COL13A1-203ENST00000398969 MYL5Q02045 173 aa29.47■■■□□ 2.31
COL13A1-203ENST00000398969 LPIN2Q92539 896 aa29.47■■■□□ 2.31
COL13A1-203ENST00000398969 SPATA31A6Q5VVP1 1343 aa29.47■■■□□ 2.31
COL13A1-203ENST00000398969 STK36Q9NRP7 1315 aa29.47■■■□□ 2.31
COL13A1-203ENST00000398969 LRP5O75197 1615 aa29.47■■■□□ 2.31
COL13A1-203ENST00000398969 PATL2C9JE40 543 aaKnown RBP29.47■■■□□ 2.31
COL13A1-203ENST00000398969 UBE2Q2LH0YL09 131 aa29.47■■■□□ 2.31
COL13A1-203ENST00000398969 NRDCO43847 1150 aa29.47■■■□□ 2.31
COL13A1-203ENST00000398969 FGFR2P21802 821 aa29.47■■■□□ 2.31
COL13A1-203ENST00000398969 IFNL3Q8IZI9 196 aa29.47■■■□□ 2.31
COL13A1-203ENST00000398969 METTL16Q86W50 562 aaKnown RBP29.46■■■□□ 2.31
COL13A1-203ENST00000398969 SMARCC1Q92922 1105 aaPredicted RBP29.46■■■□□ 2.31
COL13A1-203ENST00000398969 GTPBP4Q9BZE4 634 aaKnown RBP29.46■■■□□ 2.31
COL13A1-203ENST00000398969 ZSWIM5Q9P217 1185 aa29.46■■■□□ 2.31
COL13A1-203ENST00000398969 SLC12A7Q9Y666 1083 aa29.46■■■□□ 2.31
COL13A1-203ENST00000398969 SLU7O95391 586 aaKnown RBP29.46■■■□□ 2.31
COL13A1-203ENST00000398969 HELBQ8NG08 1087 aaPredicted RBP29.46■■■□□ 2.31
COL13A1-203ENST00000398969 SLC26A6Q9BXS9 759 aa29.46■■■□□ 2.31
COL13A1-203ENST00000398969 NOL12Q9UGY1 213 aaKnown RBP eCLIP29.46■■■□□ 2.31
COL13A1-203ENST00000398969 DDX41Q9UJV9 622 aaKnown RBP29.46■■■□□ 2.31
COL13A1-203ENST00000398969 V9GYY5 206 aaPredicted RBP29.46■■■□□ 2.31
COL13A1-203ENST00000398969 ARAP2Q8WZ64 1704 aa29.46■■■□□ 2.31
COL13A1-203ENST00000398969 CTDSPL2Q05D32 466 aa29.45■■■□□ 2.31
COL13A1-203ENST00000398969 LONRF3Q496Y0 759 aa29.45■■■□□ 2.31
COL13A1-203ENST00000398969 SPATA5Q8NB90 893 aa29.45■■■□□ 2.31
COL13A1-203ENST00000398969 NAPBQ9H115 298 aa29.45■■■□□ 2.31
COL13A1-203ENST00000398969 TACC3Q9Y6A5 838 aa29.45■■■□□ 2.31
COL13A1-203ENST00000398969 IFIT3O14879 490 aaKnown RBP29.45■■■□□ 2.3
COL13A1-203ENST00000398969 FMNL1O95466 1100 aaPredicted RBP29.45■■■□□ 2.3
COL13A1-203ENST00000398969 SSRP1Q08945 709 aaKnown RBP29.45■■■□□ 2.3
COL13A1-203ENST00000398969 KRBA2Q6ZNG9 492 aa29.45■■■□□ 2.3
COL13A1-203ENST00000398969 ZNF397Q8NF99 534 aaPredicted RBP29.45■■■□□ 2.3
COL13A1-203ENST00000398969 DPF2Q92785 391 aa29.45■■■□□ 2.3
COL13A1-203ENST00000398969 KCNH3Q9ULD8 1083 aa29.45■■■□□ 2.3
COL13A1-203ENST00000398969 MROH5Q6ZUA9 1318 aa29.45■■■□□ 2.3
COL13A1-203ENST00000398969 MBD4O95243 580 aa29.44■■■□□ 2.3
COL13A1-203ENST00000398969 UBASH3AP57075 661 aa29.44■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms