RNA–Protein interactions for RNA: ENST00000394536.4

PCDH1-203, Transcript of protocadherin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH1, Length 3,827 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-203ENST00000394536 ARMCX5Q6P1M9 558 aa18.4■□□□□ 0.54
PCDH1-203ENST00000394536 KRBA2Q6ZNG9 492 aa18.4■□□□□ 0.54
PCDH1-203ENST00000394536 ANKRD7Q92527 254 aa18.4■□□□□ 0.54
PCDH1-203ENST00000394536 VPS54Q9P1Q0 977 aa18.4■□□□□ 0.54
PCDH1-203ENST00000394536 DENND2AQ9ULE3 1009 aa18.4■□□□□ 0.54
PCDH1-203ENST00000394536 FOXO4P98177 505 aa18.39■□□□□ 0.54
PCDH1-203ENST00000394536 NR5A1Q13285 461 aa18.39■□□□□ 0.54
PCDH1-203ENST00000394536 DZIP3Q86Y13 1208 aaKnown RBP18.39■□□□□ 0.54
PCDH1-203ENST00000394536 CWC15Q9P013 229 aaKnown RBP18.39■□□□□ 0.54
PCDH1-203ENST00000394536 PPP2R2CQ9Y2T4 447 aa18.39■□□□□ 0.54
PCDH1-203ENST00000394536 WDHD1O75717 1129 aaPredicted RBP18.39■□□□□ 0.53
PCDH1-203ENST00000394536 EIF3JO75822 258 aaKnown RBP18.39■□□□□ 0.53
PCDH1-203ENST00000394536 IFIT1BQ5T764 474 aaKnown RBP18.39■□□□□ 0.53
PCDH1-203ENST00000394536 WWC3Q9ULE0 1092 aa18.39■□□□□ 0.53
PCDH1-203ENST00000394536 ASAP1Q9ULH1 1129 aa18.39■□□□□ 0.53
PCDH1-203ENST00000394536 UTP14CQ5TAP6 766 aaKnown RBP18.39■□□□□ 0.53
PCDH1-203ENST00000394536 NOSTRINQ8IVI9 506 aa18.39■□□□□ 0.53
PCDH1-203ENST00000394536 ESR2Q92731 530 aa18.39■□□□□ 0.53
PCDH1-203ENST00000394536 TEX13AQ9BXU3 409 aaPredicted RBP18.39■□□□□ 0.53
PCDH1-203ENST00000394536 AKR1B15C9JRZ8 316 aaPredicted RBP18.38■□□□□ 0.53
PCDH1-203ENST00000394536 CTIFO43310 598 aaKnown RBP18.38■□□□□ 0.53
PCDH1-203ENST00000394536 RILPL1Q5EBL4 403 aa18.38■□□□□ 0.53
PCDH1-203ENST00000394536 AMOTL1Q8IY63 956 aa18.38■□□□□ 0.53
PCDH1-203ENST00000394536 DPF2Q92785 391 aa18.38■□□□□ 0.53
PCDH1-203ENST00000394536 PCDH11XQ9BZA7 1347 aa18.38■□□□□ 0.53
PCDH1-203ENST00000394536 PCDH11YQ9BZA8 1340 aa18.38■□□□□ 0.53
PCDH1-203ENST00000394536 DNA2P51530 1060 aa18.38■□□□□ 0.53
PCDH1-203ENST00000394536 RABL6Q3YEC7 729 aaPredicted RBP18.38■□□□□ 0.53
PCDH1-203ENST00000394536 E4F1Q66K89 784 aaPredicted RBP18.38■□□□□ 0.53
PCDH1-203ENST00000394536 SPECC1LQ69YQ0 1117 aa18.38■□□□□ 0.53
PCDH1-203ENST00000394536 GOLGA1Q92805 767 aa18.38■□□□□ 0.53
PCDH1-203ENST00000394536 PSDA5PKW4 1024 aaPredicted RBP18.38■□□□□ 0.53
PCDH1-203ENST00000394536 FOXN1O15353 648 aa18.38■□□□□ 0.53
PCDH1-203ENST00000394536 MCM7P33993 719 aa18.38■□□□□ 0.53
PCDH1-203ENST00000394536 STIM1Q13586 685 aa18.38■□□□□ 0.53
PCDH1-203ENST00000394536 GPR108Q9NPR9 543 aa18.38■□□□□ 0.53
PCDH1-203ENST00000394536 EEF2KMTQ96G04 330 aa18.37■□□□□ 0.53
PCDH1-203ENST00000394536 GUCA1BQ9UMX6 200 aa18.37■□□□□ 0.53
PCDH1-203ENST00000394536 ZMYM6O95789 1325 aa18.37■□□□□ 0.53
PCDH1-203ENST00000394536 PRKAB2O43741 272 aa18.37■□□□□ 0.53
PCDH1-203ENST00000394536 CLCN6P51797 869 aa18.37■□□□□ 0.53
PCDH1-203ENST00000394536 SMYD4Q8IYR2 804 aaPredicted RBP18.37■□□□□ 0.53
PCDH1-203ENST00000394536 IFNL3Q8IZI9 196 aa18.37■□□□□ 0.53
PCDH1-203ENST00000394536 ENGASEQ8NFI3 743 aa18.37■□□□□ 0.53
PCDH1-203ENST00000394536 RIMS1Q86UR5 1692 aaKnown RBP18.37■□□□□ 0.53
PCDH1-203ENST00000394536 ANKRD26Q9UPS8 1709 aa18.37■□□□□ 0.53
PCDH1-203ENST00000394536 NOC3LQ8WTT2 800 aaKnown RBP18.37■□□□□ 0.53
PCDH1-203ENST00000394536 IL17RAQ96F46 866 aa18.37■□□□□ 0.53
PCDH1-203ENST00000394536 DEF6Q9H4E7 631 aa18.37■□□□□ 0.53
PCDH1-203ENST00000394536 TUBB4AP04350 444 aa18.36■□□□□ 0.53
PCDH1-203ENST00000394536 MCAMP43121 646 aa18.36■□□□□ 0.53
PCDH1-203ENST00000394536 BLZF1Q9H2G9 400 aa18.36■□□□□ 0.53
PCDH1-203ENST00000394536 SAMSN1Q9NSI8 373 aaKnown RBP18.36■□□□□ 0.53
PCDH1-203ENST00000394536 ZSWIM5Q9P217 1185 aa18.36■□□□□ 0.53
PCDH1-203ENST00000394536 ANKARQ7Z5J8 1434 aa18.36■□□□□ 0.53
PCDH1-203ENST00000394536 GPIHBP1Q8IV16 184 aa18.36■□□□□ 0.53
PCDH1-203ENST00000394536 TMTC2Q8N394 836 aa18.36■□□□□ 0.53
PCDH1-203ENST00000394536 MLKLQ8NB16 471 aa18.36■□□□□ 0.53
PCDH1-203ENST00000394536 SDR42E1Q8WUS8 393 aa18.36■□□□□ 0.53
PCDH1-203ENST00000394536 ACSBG1Q96GR2 724 aa18.36■□□□□ 0.53
PCDH1-203ENST00000394536 TSPY2A6NKD2 308 aa18.36■□□□□ 0.53
PCDH1-203ENST00000394536 CAVIN4Q5BKX8 364 aa18.36■□□□□ 0.53
PCDH1-203ENST00000394536 AKNAD1Q5T1N1 836 aa18.36■□□□□ 0.53
PCDH1-203ENST00000394536 CYB5R4Q7L1T6 521 aa18.36■□□□□ 0.53
PCDH1-203ENST00000394536 TBC1D10CQ8IV04 446 aa18.36■□□□□ 0.53
PCDH1-203ENST00000394536 UTYO14607 1347 aa18.35■□□□□ 0.53
PCDH1-203ENST00000394536 CDC27P30260 824 aa18.35■□□□□ 0.53
PCDH1-203ENST00000394536 SPATA5Q8NB90 893 aa18.35■□□□□ 0.53
PCDH1-203ENST00000394536 NEK11Q8NG66 645 aa18.35■□□□□ 0.53
PCDH1-203ENST00000394536 ITSN1Q15811 1721 aa18.35■□□□□ 0.53
PCDH1-203ENST00000394536 CASP1P29466 404 aa18.35■□□□□ 0.53
PCDH1-203ENST00000394536 HSPA2P54652 639 aa18.35■□□□□ 0.53
PCDH1-203ENST00000394536 KLHL34Q8N239 644 aa18.35■□□□□ 0.53
PCDH1-203ENST00000394536 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.35■□□□□ 0.53
PCDH1-203ENST00000394536 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.35■□□□□ 0.53
PCDH1-203ENST00000394536 UBA7P41226 1012 aa18.35■□□□□ 0.53
PCDH1-203ENST00000394536 PDE4CQ08493 712 aa18.35■□□□□ 0.53
PCDH1-203ENST00000394536 RBM43Q6ZSC3 357 aaKnown RBP18.35■□□□□ 0.53
PCDH1-203ENST00000394536 TANGO6Q9C0B7 1094 aa18.35■□□□□ 0.53
PCDH1-203ENST00000394536 PIH1D3Q9NQM4 214 aaKnown RBP18.35■□□□□ 0.53
PCDH1-203ENST00000394536 VPS18Q9P253 973 aa18.35■□□□□ 0.53
PCDH1-203ENST00000394536 DEXIO95424 95 aa18.34■□□□□ 0.53
PCDH1-203ENST00000394536 MATR3P43243 847 aaKnown RBP eCLIP18.34■□□□□ 0.53
PCDH1-203ENST00000394536 CAPZA3Q96KX2 299 aa18.34■□□□□ 0.53
PCDH1-203ENST00000394536 RUFY1Q96T51 708 aa18.34■□□□□ 0.53
PCDH1-203ENST00000394536 CTAGE9A4FU28 777 aa18.34■□□□□ 0.53
PCDH1-203ENST00000394536 UBE2Q2LH0YL09 131 aa18.34■□□□□ 0.53
PCDH1-203ENST00000394536 SSBP05455 408 aaKnown RBP eCLIP18.34■□□□□ 0.53
PCDH1-203ENST00000394536 BCAMP50895 628 aa18.34■□□□□ 0.53
PCDH1-203ENST00000394536 PUM3Q15397 648 aaKnown RBP18.34■□□□□ 0.53
PCDH1-203ENST00000394536 ENOX2Q16206 610 aaKnown RBP18.34■□□□□ 0.53
PCDH1-203ENST00000394536 ZBTB38Q8NAP3 1195 aaPredicted RBP18.34■□□□□ 0.53
PCDH1-203ENST00000394536 SENP2Q9HC62 589 aa18.34■□□□□ 0.53
PCDH1-203ENST00000394536 NPHP4O75161 1426 aaPredicted RBP18.34■□□□□ 0.53
PCDH1-203ENST00000394536 CCDC194A0A1B0GVG4 234 aa18.34■□□□□ 0.53
PCDH1-203ENST00000394536 EXOC5O00471 708 aa18.34■□□□□ 0.53
PCDH1-203ENST00000394536 MB21D2Q8IYB1 491 aaPredicted RBP18.34■□□□□ 0.53
PCDH1-203ENST00000394536 DRC1Q96MC2 740 aa18.34■□□□□ 0.53
PCDH1-203ENST00000394536 OSBPL5Q9H0X9 879 aaPredicted RBP18.34■□□□□ 0.53
PCDH1-203ENST00000394536 VAT1LQ9HCJ6 419 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms