RNA–Protein interactions for RNA: ENST00000377298.8

CLSTN1-202, Transcript of calsyntenin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLSTN1, Length 5,221 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-202ENST00000377298 ZBTB21Q9ULJ3 1066 aa20.19■□□□□ 0.82
CLSTN1-202ENST00000377298 STK24Q9Y6E0 443 aa20.19■□□□□ 0.82
CLSTN1-202ENST00000377298 MAP3K4Q9Y6R4 1608 aa20.19■□□□□ 0.82
CLSTN1-202ENST00000377298 ECM2O94769 699 aaPredicted RBP20.19■□□□□ 0.82
CLSTN1-202ENST00000377298 ZNF772Q68DY9 489 aaPredicted RBP20.19■□□□□ 0.82
CLSTN1-202ENST00000377298 USP40Q9NVE5 1235 aa20.19■□□□□ 0.82
CLSTN1-202ENST00000377298 GOPCQ9HD26 462 aa20.18■□□□□ 0.82
CLSTN1-202ENST00000377298 BIN2Q9UBW5 565 aaPredicted RBP20.18■□□□□ 0.82
CLSTN1-202ENST00000377298 PAXBP1Q9Y5B6 917 aa20.18■□□□□ 0.82
CLSTN1-202ENST00000377298 SSH2Q76I76 1423 aa20.18■□□□□ 0.82
CLSTN1-202ENST00000377298 A0A1B0GVL5 298 aa20.18■□□□□ 0.82
CLSTN1-202ENST00000377298 HLTFQ14527 1009 aaKnown RBP eCLIP20.18■□□□□ 0.82
CLSTN1-202ENST00000377298 TRMT2AQ8IZ69 625 aaKnown RBP20.18■□□□□ 0.82
CLSTN1-202ENST00000377298 CDK12Q9NYV4 1490 aaPredicted RBP20.18■□□□□ 0.82
CLSTN1-202ENST00000377298 TCP10Q12799 353 aa20.18■□□□□ 0.82
CLSTN1-202ENST00000377298 NONOQ15233 471 aaKnown RBP eCLIP20.18■□□□□ 0.82
CLSTN1-202ENST00000377298 CEP135Q66GS9 1140 aa20.18■□□□□ 0.82
CLSTN1-202ENST00000377298 ZBTB1Q9Y2K1 713 aa20.18■□□□□ 0.82
CLSTN1-202ENST00000377298 DYNC1I1O14576 645 aa20.18■□□□□ 0.82
CLSTN1-202ENST00000377298 CIAO1O76071 339 aa20.18■□□□□ 0.82
CLSTN1-202ENST00000377298 CCT6AP40227 531 aaKnown RBP20.18■□□□□ 0.82
CLSTN1-202ENST00000377298 PRPHP41219 470 aa20.18■□□□□ 0.82
CLSTN1-202ENST00000377298 ADCY7P51828 1080 aa20.18■□□□□ 0.82
CLSTN1-202ENST00000377298 STX17P56962 302 aa20.18■□□□□ 0.82
CLSTN1-202ENST00000377298 CHRNDQ07001 517 aa20.18■□□□□ 0.82
CLSTN1-202ENST00000377298 UBE4AQ14139 1066 aa20.18■□□□□ 0.82
CLSTN1-202ENST00000377298 PLIN2Q99541 437 aa20.18■□□□□ 0.82
CLSTN1-202ENST00000377298 PRDM10Q9NQV6 1147 aa20.18■□□□□ 0.82
CLSTN1-202ENST00000377298 GYG1P46976 350 aa20.17■□□□□ 0.82
CLSTN1-202ENST00000377298 C2CD5Q86YS7 1000 aa20.17■□□□□ 0.82
CLSTN1-202ENST00000377298 GPR108Q9NPR9 543 aa20.17■□□□□ 0.82
CLSTN1-202ENST00000377298 PDE6AP16499 860 aa20.17■□□□□ 0.82
CLSTN1-202ENST00000377298 ACTN2P35609 894 aa20.17■□□□□ 0.82
CLSTN1-202ENST00000377298 TNFAIP1Q13829 316 aa20.17■□□□□ 0.82
CLSTN1-202ENST00000377298 TTC38Q5R3I4 469 aa20.17■□□□□ 0.82
CLSTN1-202ENST00000377298 NEK11Q8NG66 645 aa20.17■□□□□ 0.82
CLSTN1-202ENST00000377298 EDC3Q96F86 508 aaKnown RBP20.17■□□□□ 0.82
CLSTN1-202ENST00000377298 DKC1O60832 514 aaKnown RBP eCLIP20.17■□□□□ 0.82
CLSTN1-202ENST00000377298 CUTAO60888 179 aa20.17■□□□□ 0.82
CLSTN1-202ENST00000377298 PDE8BO95263 885 aa20.17■□□□□ 0.82
CLSTN1-202ENST00000377298 KRT83P78385 493 aa20.17■□□□□ 0.82
CLSTN1-202ENST00000377298 PROSER3Q2NL68 480 aa20.17■□□□□ 0.82
CLSTN1-202ENST00000377298 LRRC24Q50LG9 513 aa20.17■□□□□ 0.82
CLSTN1-202ENST00000377298 DYDC1Q8WWB3 177 aa20.17■□□□□ 0.82
CLSTN1-202ENST00000377298 ZBED4O75132 1171 aa20.16■□□□□ 0.82
CLSTN1-202ENST00000377298 CGNQ9P2M7 1197 aaKnown RBP20.16■□□□□ 0.82
CLSTN1-202ENST00000377298 MRVI1Q9Y6F6 885 aa20.16■□□□□ 0.82
CLSTN1-202ENST00000377298 ZNF335Q9H4Z2 1342 aaPredicted RBP20.16■□□□□ 0.82
CLSTN1-202ENST00000377298 H7C1D1 291 aa20.16■□□□□ 0.82
CLSTN1-202ENST00000377298 GCOM1H8Y6P7 765 aaPredicted RBP20.16■□□□□ 0.82
CLSTN1-202ENST00000377298 MYZAPP0CAP1 466 aa20.16■□□□□ 0.82
CLSTN1-202ENST00000377298 MSL1Q68DK7 614 aa20.16■□□□□ 0.82
CLSTN1-202ENST00000377298 TTC12Q9H892 705 aaPredicted RBP20.16■□□□□ 0.82
CLSTN1-202ENST00000377298 ZNF408Q9H9D4 720 aa20.16■□□□□ 0.82
CLSTN1-202ENST00000377298 USP17L12C9JPN9 530 aa20.16■□□□□ 0.82
CLSTN1-202ENST00000377298 USP17L21D6R901 530 aa20.16■□□□□ 0.82
CLSTN1-202ENST00000377298 SP4Q02446 784 aa20.16■□□□□ 0.82
CLSTN1-202ENST00000377298 CKAP4Q07065 602 aaKnown RBP20.16■□□□□ 0.82
CLSTN1-202ENST00000377298 CCDC113Q9H0I3 377 aa20.16■□□□□ 0.82
CLSTN1-202ENST00000377298 KCNH3Q9ULD8 1083 aa20.16■□□□□ 0.82
CLSTN1-202ENST00000377298 GOLGA6L10A0A0M3HER8 536 aa20.16■□□□□ 0.82
CLSTN1-202ENST00000377298 CCNT1O60563 726 aaKnown RBP20.16■□□□□ 0.82
CLSTN1-202ENST00000377298 TUBB4AP04350 444 aa20.16■□□□□ 0.82
CLSTN1-202ENST00000377298 BCAMP50895 628 aa20.16■□□□□ 0.82
CLSTN1-202ENST00000377298 GREM2Q9H772 168 aa20.16■□□□□ 0.82
CLSTN1-202ENST00000377298 THRAP3Q9Y2W1 955 aaKnown RBP20.16■□□□□ 0.82
CLSTN1-202ENST00000377298 MYL5Q02045 173 aa20.15■□□□□ 0.82
CLSTN1-202ENST00000377298 UBXN1Q04323 297 aa20.15■□□□□ 0.82
CLSTN1-202ENST00000377298 ZYXQ15942 572 aaKnown RBP20.15■□□□□ 0.82
CLSTN1-202ENST00000377298 MYL10Q9BUA6 226 aa20.15■□□□□ 0.82
CLSTN1-202ENST00000377298 KRT40Q6A162 431 aa20.15■□□□□ 0.82
CLSTN1-202ENST00000377298 CCDC91Q7Z6B0 441 aa20.15■□□□□ 0.82
CLSTN1-202ENST00000377298 FMNL3Q8IVF7 1028 aa20.15■□□□□ 0.82
CLSTN1-202ENST00000377298 MAP3K9P80192 1104 aa20.15■□□□□ 0.82
CLSTN1-202ENST00000377298 CCDC42Q96M95 316 aa20.15■□□□□ 0.82
CLSTN1-202ENST00000377298 TACC1O75410 805 aa20.14■□□□□ 0.82
CLSTN1-202ENST00000377298 IFNL3Q8IZI9 196 aa20.14■□□□□ 0.82
CLSTN1-202ENST00000377298 A2ML1A8K2U0 1454 aa20.14■□□□□ 0.81
CLSTN1-202ENST00000377298 CCDC175P0C221 793 aa20.14■□□□□ 0.81
CLSTN1-202ENST00000377298 KIAA0753Q2KHM9 967 aa20.14■□□□□ 0.81
CLSTN1-202ENST00000377298 SPECC1Q5M775 1068 aa20.14■□□□□ 0.81
CLSTN1-202ENST00000377298 TMC4Q7Z404 712 aa20.14■□□□□ 0.81
CLSTN1-202ENST00000377298 APBB1IPQ7Z5R6 666 aaPredicted RBP20.14■□□□□ 0.81
CLSTN1-202ENST00000377298 LMBR1Q8WVP7 490 aa20.14■□□□□ 0.81
CLSTN1-202ENST00000377298 ZNF853P0CG23 659 aa20.14■□□□□ 0.81
CLSTN1-202ENST00000377298 BRINP3Q76B58 766 aa20.14■□□□□ 0.81
CLSTN1-202ENST00000377298 IVNS1ABPQ9Y6Y0 642 aa20.14■□□□□ 0.81
CLSTN1-202ENST00000377298 ARID4AP29374 1257 aaPredicted RBP20.13■□□□□ 0.81
CLSTN1-202ENST00000377298 PHKBQ93100 1093 aa20.13■□□□□ 0.81
CLSTN1-202ENST00000377298 PRIMPOLQ96LW4 560 aa20.13■□□□□ 0.81
CLSTN1-202ENST00000377298 PKD2L1Q9P0L9 805 aa20.13■□□□□ 0.81
CLSTN1-202ENST00000377298 SPATA31A3Q5VYP0 1347 aa20.13■□□□□ 0.81
CLSTN1-202ENST00000377298 A0A0D9SFI3 127 aa20.13■□□□□ 0.81
CLSTN1-202ENST00000377298 SEMA3EO15041 775 aa20.13■□□□□ 0.81
CLSTN1-202ENST00000377298 CNNM4Q6P4Q7 775 aa20.13■□□□□ 0.81
CLSTN1-202ENST00000377298 LEMD3Q9Y2U8 911 aa20.13■□□□□ 0.81
CLSTN1-202ENST00000377298 IQGAP3Q86VI3 1631 aa20.13■□□□□ 0.81
CLSTN1-202ENST00000377298 ZNF804BA4D1E1 1349 aa20.13■□□□□ 0.81
CLSTN1-202ENST00000377298 GSPT1P15170 499 aaKnown RBP20.13■□□□□ 0.81
CLSTN1-202ENST00000377298 TXKP42681 527 aa20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms