RNA–Protein interactions for RNA: ENST00000374879.4

TMEFF1-201, Transcript of transmembrane protein with EGF like and two follistatin like domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEFF1, Length 2,611 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1-201ENST00000374879 GCP02774 474 aa23.45■■□□□ 1.34
TMEFF1-201ENST00000374879 CDC27P30260 824 aa23.45■■□□□ 1.34
TMEFF1-201ENST00000374879 SYKP43405 635 aa23.45■■□□□ 1.34
TMEFF1-201ENST00000374879 CWF19L2Q2TBE0 894 aaKnown RBP23.44■■□□□ 1.34
TMEFF1-201ENST00000374879 SLC35F6Q8N357 371 aa23.44■■□□□ 1.34
TMEFF1-201ENST00000374879 RABEP2Q9H5N1 569 aa23.44■■□□□ 1.34
TMEFF1-201ENST00000374879 KAT14Q9H8E8 782 aa23.44■■□□□ 1.34
TMEFF1-201ENST00000374879 VIPAS39Q9H9C1 493 aa23.44■■□□□ 1.34
TMEFF1-201ENST00000374879 PRAMEF22A3QJZ6 481 aa23.44■■□□□ 1.34
TMEFF1-201ENST00000374879 SHOX2O60902 331 aaPredicted RBP23.44■■□□□ 1.34
TMEFF1-201ENST00000374879 MYSM1Q5VVJ2 828 aa23.44■■□□□ 1.34
TMEFF1-201ENST00000374879 JPH2Q9BR39 696 aaPredicted RBP23.44■■□□□ 1.34
TMEFF1-201ENST00000374879 CCDC189A1A4V9 331 aa23.43■■□□□ 1.34
TMEFF1-201ENST00000374879 MYO1BO43795 1136 aa23.43■■□□□ 1.34
TMEFF1-201ENST00000374879 PDIA3P30101 505 aaKnown RBP23.43■■□□□ 1.34
TMEFF1-201ENST00000374879 KSR2Q6VAB6 950 aa23.43■■□□□ 1.34
TMEFF1-201ENST00000374879 DHX37Q8IY37 1157 aaKnown RBP23.43■■□□□ 1.34
TMEFF1-201ENST00000374879 CTCFLQ8NI51 663 aaPredicted RBP23.43■■□□□ 1.34
TMEFF1-201ENST00000374879 EHD4Q9H223 541 aa23.43■■□□□ 1.34
TMEFF1-201ENST00000374879 HPCAL4Q9UM19 191 aa23.43■■□□□ 1.34
TMEFF1-201ENST00000374879 NDUFB9Q9Y6M9 179 aa23.43■■□□□ 1.34
TMEFF1-201ENST00000374879 SATB1Q01826 763 aa23.43■■□□□ 1.34
TMEFF1-201ENST00000374879 G3BP1Q13283 466 aaKnown RBP eCLIP23.43■■□□□ 1.34
TMEFF1-201ENST00000374879 TUBB2AQ13885 445 aa23.43■■□□□ 1.34
TMEFF1-201ENST00000374879 LMOD2Q6P5Q4 547 aa23.43■■□□□ 1.34
TMEFF1-201ENST00000374879 ARHGEF25Q86VW2 580 aa23.43■■□□□ 1.34
TMEFF1-201ENST00000374879 TUBB2BQ9BVA1 445 aa23.43■■□□□ 1.34
TMEFF1-201ENST00000374879 IRAK1P51617 712 aa23.42■■□□□ 1.34
TMEFF1-201ENST00000374879 WDR93Q6P2C0 686 aa23.42■■□□□ 1.34
TMEFF1-201ENST00000374879 FOXP4Q8IVH2 680 aaPredicted RBP23.42■■□□□ 1.34
TMEFF1-201ENST00000374879 CDC5LQ99459 802 aaKnown RBP23.42■■□□□ 1.34
TMEFF1-201ENST00000374879 GJB4Q9NTQ9 266 aa23.42■■□□□ 1.34
TMEFF1-201ENST00000374879 BMP6P22004 513 aa23.42■■□□□ 1.34
TMEFF1-201ENST00000374879 ANO1Q5XXA6 986 aa23.42■■□□□ 1.34
TMEFF1-201ENST00000374879 CHST3Q7LGC8 479 aa23.42■■□□□ 1.34
TMEFF1-201ENST00000374879 CNPY4Q8N129 248 aa23.42■■□□□ 1.34
TMEFF1-201ENST00000374879 RAI14Q9P0K7 980 aa23.42■■□□□ 1.34
TMEFF1-201ENST00000374879 ABL1P00519 1130 aa23.41■■□□□ 1.34
TMEFF1-201ENST00000374879 INPP5BP32019 993 aa23.41■■□□□ 1.34
TMEFF1-201ENST00000374879 SYNE3Q6ZMZ3 975 aa23.41■■□□□ 1.34
TMEFF1-201ENST00000374879 PPP1R3FQ6ZSY5 799 aaPredicted RBP23.41■■□□□ 1.34
TMEFF1-201ENST00000374879 ANKRD24Q8TF21 1146 aa23.41■■□□□ 1.34
TMEFF1-201ENST00000374879 ORAI2Q96SN7 254 aa23.41■■□□□ 1.34
TMEFF1-201ENST00000374879 ZC3H4Q9UPT8 1303 aaKnown RBP23.41■■□□□ 1.34
TMEFF1-201ENST00000374879 PHRF1Q9P1Y6 1649 aaKnown RBP23.41■■□□□ 1.34
TMEFF1-201ENST00000374879 TUBBP07437 444 aa23.41■■□□□ 1.34
TMEFF1-201ENST00000374879 EXOSC10Q01780 885 aaKnown RBP23.41■■□□□ 1.34
TMEFF1-201ENST00000374879 RPAINQ86UA6 219 aa23.41■■□□□ 1.34
TMEFF1-201ENST00000374879 NCAPD2Q15021 1401 aa23.4■■□□□ 1.34
TMEFF1-201ENST00000374879 SCP2P22307 547 aa23.4■■□□□ 1.34
TMEFF1-201ENST00000374879 PIP4K2BP78356 416 aa23.4■■□□□ 1.34
TMEFF1-201ENST00000374879 GDAP1L1Q96MZ0 367 aa23.4■■□□□ 1.34
TMEFF1-201ENST00000374879 TEX13AQ9BXU3 409 aaPredicted RBP23.4■■□□□ 1.34
TMEFF1-201ENST00000374879 AKR1B15C9JRZ8 316 aaPredicted RBP23.4■■□□□ 1.34
TMEFF1-201ENST00000374879 HMGB1P09429 215 aaKnown RBP23.4■■□□□ 1.34
TMEFF1-201ENST00000374879 GGCXP38435 758 aa23.4■■□□□ 1.34
TMEFF1-201ENST00000374879 CPLX2Q6PUV4 134 aaKnown RBP23.4■■□□□ 1.34
TMEFF1-201ENST00000374879 KIF28PB7ZC32 967 aa23.39■■□□□ 1.34
TMEFF1-201ENST00000374879 AKAP17AQ02040 695 aaKnown RBP23.39■■□□□ 1.34
TMEFF1-201ENST00000374879 WHAMMP3Q1A5X7 153 aa23.39■■□□□ 1.34
TMEFF1-201ENST00000374879 NCAPH2Q6IBW4 605 aa23.39■■□□□ 1.34
TMEFF1-201ENST00000374879 GBP6Q6ZN66 633 aa23.39■■□□□ 1.34
TMEFF1-201ENST00000374879 METTL16Q86W50 562 aaKnown RBP23.39■■□□□ 1.34
TMEFF1-201ENST00000374879 PRPF38AQ8NAV1 312 aaKnown RBP23.39■■□□□ 1.34
TMEFF1-201ENST00000374879 C8orf76Q96K31 380 aa23.39■■□□□ 1.34
TMEFF1-201ENST00000374879 PCDHA5Q9Y5H7 936 aa23.39■■□□□ 1.34
TMEFF1-201ENST00000374879 BCAS4Q8TDM0 211 aa23.39■■□□□ 1.33
TMEFF1-201ENST00000374879 AGXT2Q9BYV1 514 aa23.39■■□□□ 1.33
TMEFF1-201ENST00000374879 NFE2L3Q9Y4A8 694 aa23.39■■□□□ 1.33
TMEFF1-201ENST00000374879 ZNF609O15014 1411 aa23.39■■□□□ 1.33
TMEFF1-201ENST00000374879 LAMA4Q16363 1823 aa23.38■■□□□ 1.33
TMEFF1-201ENST00000374879 POTEDQ86YR6 584 aa23.38■■□□□ 1.33
TMEFF1-201ENST00000374879 CPLX3Q8WVH0 158 aa23.38■■□□□ 1.33
TMEFF1-201ENST00000374879 NAPGQ99747 312 aaPredicted RBP23.38■■□□□ 1.33
TMEFF1-201ENST00000374879 HPSEQ9Y251 543 aa23.38■■□□□ 1.33
TMEFF1-201ENST00000374879 FMR1Q06787 632 aaKnown RBP eCLIP23.38■■□□□ 1.33
TMEFF1-201ENST00000374879 STIM1Q13586 685 aa23.38■■□□□ 1.33
TMEFF1-201ENST00000374879 SHC4Q6S5L8 630 aa23.38■■□□□ 1.33
TMEFF1-201ENST00000374879 FAM76AQ8TAV0 307 aa23.38■■□□□ 1.33
TMEFF1-201ENST00000374879 PANX2Q96RD6 677 aa23.38■■□□□ 1.33
TMEFF1-201ENST00000374879 CAPN7Q9Y6W3 813 aa23.38■■□□□ 1.33
TMEFF1-201ENST00000374879 HEG1Q9ULI3 1381 aa23.38■■□□□ 1.33
TMEFF1-201ENST00000374879 A0A0G2JLW4 131 aa23.37■■□□□ 1.33
TMEFF1-201ENST00000374879 ZNF18P17022 549 aa23.37■■□□□ 1.33
TMEFF1-201ENST00000374879 AIMP1Q12904 312 aaKnown RBP23.37■■□□□ 1.33
TMEFF1-201ENST00000374879 ZNF274Q96GC6 653 aaPredicted RBP23.37■■□□□ 1.33
TMEFF1-201ENST00000374879 GNL3LQ9NVN8 582 aaKnown RBP23.37■■□□□ 1.33
TMEFF1-201ENST00000374879 MYO1FO00160 1098 aa23.36■■□□□ 1.33
TMEFF1-201ENST00000374879 GRM8O00222 908 aa23.36■■□□□ 1.33
TMEFF1-201ENST00000374879 SETQ01105 290 aaPredicted RBP23.36■■□□□ 1.33
TMEFF1-201ENST00000374879 TRMT44Q8IYL2 757 aaKnown RBP23.36■■□□□ 1.33
TMEFF1-201ENST00000374879 AXIN2Q9Y2T1 843 aa23.36■■□□□ 1.33
TMEFF1-201ENST00000374879 SAMM50Q9Y512 469 aa23.36■■□□□ 1.33
TMEFF1-201ENST00000374879 OVOS2A0A0G2JMS6 1433 aa23.36■■□□□ 1.33
TMEFF1-201ENST00000374879 AGPSO00116 658 aa23.36■■□□□ 1.33
TMEFF1-201ENST00000374879 FOXN1O15353 648 aa23.36■■□□□ 1.33
TMEFF1-201ENST00000374879 GPTP24298 496 aa23.36■■□□□ 1.33
TMEFF1-201ENST00000374879 NR1I3Q14994 352 aa23.36■■□□□ 1.33
TMEFF1-201ENST00000374879 LONRF3Q496Y0 759 aa23.36■■□□□ 1.33
TMEFF1-201ENST00000374879 MCMDC2Q4G0Z9 681 aa23.36■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms