RNA–Protein interactions for RNA: ENST00000373960.3

DES-201, Transcript of desmin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DES, Length 2,248 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DES-201ENST00000373960 CCDC93Q567U6 631 aa25.28■■□□□ 1.64
DES-201ENST00000373960 ARMCX5Q6P1M9 558 aa25.28■■□□□ 1.64
DES-201ENST00000373960 ABCC12Q96J65 1359 aa25.27■■□□□ 1.64
DES-201ENST00000373960 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP25.27■■□□□ 1.64
DES-201ENST00000373960 MMP10P09238 476 aa25.27■■□□□ 1.64
DES-201ENST00000373960 PPP1R13BQ96KQ4 1090 aa25.27■■□□□ 1.64
DES-201ENST00000373960 XPO4Q9C0E2 1151 aaKnown RBP25.27■■□□□ 1.64
DES-201ENST00000373960 RNF113AO15541 343 aaKnown RBP25.27■■□□□ 1.64
DES-201ENST00000373960 SERPINB2P05120 415 aa25.27■■□□□ 1.64
DES-201ENST00000373960 TM4SF1P30408 202 aa25.27■■□□□ 1.64
DES-201ENST00000373960 NLRP12P59046 1061 aa25.26■■□□□ 1.63
DES-201ENST00000373960 NCAPHQ15003 741 aa25.26■■□□□ 1.63
DES-201ENST00000373960 CLIC4Q9Y696 253 aa25.26■■□□□ 1.63
DES-201ENST00000373960 FLAD1Q8NFF5 587 aa25.25■■□□□ 1.63
DES-201ENST00000373960 NOL12Q9UGY1 213 aaKnown RBP eCLIP25.25■■□□□ 1.63
DES-201ENST00000373960 V9GYY5 206 aaPredicted RBP25.25■■□□□ 1.63
DES-201ENST00000373960 CDK11BP21127 795 aaKnown RBP25.25■■□□□ 1.63
DES-201ENST00000373960 RGS22Q8NE09 1264 aa25.25■■□□□ 1.63
DES-201ENST00000373960 GREM2Q9H772 168 aa25.25■■□□□ 1.63
DES-201ENST00000373960 IFNKQ9P0W0 207 aa25.25■■□□□ 1.63
DES-201ENST00000373960 ATF5Q9Y2D1 282 aaPredicted RBP25.25■■□□□ 1.63
DES-201ENST00000373960 TULP2O00295 520 aa25.24■■□□□ 1.63
DES-201ENST00000373960 POLRMTO00411 1230 aaKnown RBP25.24■■□□□ 1.63
DES-201ENST00000373960 H2AFXP16104 143 aaPredicted RBP25.24■■□□□ 1.63
DES-201ENST00000373960 STK38Q15208 465 aa25.24■■□□□ 1.63
DES-201ENST00000373960 PPIL4Q8WUA2 492 aaKnown RBP eCLIP25.24■■□□□ 1.63
DES-201ENST00000373960 BMS1Q14692 1282 aaKnown RBP25.24■■□□□ 1.63
DES-201ENST00000373960 TPTE2Q6XPS3 522 aa25.24■■□□□ 1.63
DES-201ENST00000373960 BRAPQ7Z569 592 aa25.24■■□□□ 1.63
DES-201ENST00000373960 DDX60Q8IY21 1712 aaKnown RBP25.23■■□□□ 1.63
DES-201ENST00000373960 SPTLC2O15270 562 aa25.23■■□□□ 1.63
DES-201ENST00000373960 IL15P40933 162 aaPredicted RBP25.23■■□□□ 1.63
DES-201ENST00000373960 PRR5LQ6MZQ0 368 aa25.23■■□□□ 1.63
DES-201ENST00000373960 CHST3Q7LGC8 479 aa25.23■■□□□ 1.63
DES-201ENST00000373960 TMC6Q7Z403 805 aa25.23■■□□□ 1.63
DES-201ENST00000373960 CNBD1Q8NA66 436 aa25.23■■□□□ 1.63
DES-201ENST00000373960 FBXO18Q8NFZ0 1043 aa25.23■■□□□ 1.63
DES-201ENST00000373960 TTLL11Q8NHH1 800 aa25.23■■□□□ 1.63
DES-201ENST00000373960 SEC31BQ9NQW1 1179 aa25.23■■□□□ 1.63
DES-201ENST00000373960 TAF1P21675 1872 aa25.23■■□□□ 1.63
DES-201ENST00000373960 NLGN1Q8N2Q7 840 aa25.22■■□□□ 1.63
DES-201ENST00000373960 NEUROD6Q96NK8 337 aa25.22■■□□□ 1.63
DES-201ENST00000373960 ZNF446Q9NWS9 450 aa25.22■■□□□ 1.63
DES-201ENST00000373960 NAP1L2Q9ULW6 460 aaPredicted RBP25.22■■□□□ 1.63
DES-201ENST00000373960 M0R2C6 588 aa25.22■■□□□ 1.63
DES-201ENST00000373960 SLC3A2P08195 630 aaKnown RBP25.22■■□□□ 1.63
DES-201ENST00000373960 TIMM10P62072 90 aa25.22■■□□□ 1.63
DES-201ENST00000373960 AXDND1Q5T1B0 1012 aaPredicted RBP25.22■■□□□ 1.63
DES-201ENST00000373960 MYSM1Q5VVJ2 828 aa25.22■■□□□ 1.63
DES-201ENST00000373960 C8orf76Q96K31 380 aa25.22■■□□□ 1.63
DES-201ENST00000373960 IKBKBO14920 756 aa25.21■■□□□ 1.63
DES-201ENST00000373960 PDE8AO60658 829 aa25.21■■□□□ 1.63
DES-201ENST00000373960 PPFIA3O75145 1194 aa25.21■■□□□ 1.63
DES-201ENST00000373960 SMC2O95347 1197 aa25.21■■□□□ 1.63
DES-201ENST00000373960 SFPQP23246 707 aaKnown RBP eCLIP25.21■■□□□ 1.63
DES-201ENST00000373960 CTSWP56202 376 aa25.21■■□□□ 1.63
DES-201ENST00000373960 SF3A1Q15459 793 aaKnown RBP25.21■■□□□ 1.63
DES-201ENST00000373960 SLC51AQ86UW1 340 aa25.21■■□□□ 1.63
DES-201ENST00000373960 FBXW7Q969H0 707 aa25.21■■□□□ 1.63
DES-201ENST00000373960 ZNF202O95125 648 aa25.21■■□□□ 1.63
DES-201ENST00000373960 CMA1P23946 247 aa25.21■■□□□ 1.63
DES-201ENST00000373960 TPM4P67936 248 aa25.21■■□□□ 1.63
DES-201ENST00000373960 TTLL5Q6EMB2 1281 aa25.21■■□□□ 1.63
DES-201ENST00000373960 HPS5Q9UPZ3 1129 aa25.21■■□□□ 1.63
DES-201ENST00000373960 ZBTB22O15209 634 aa25.2■■□□□ 1.62
DES-201ENST00000373960 HMGB2P26583 209 aaKnown RBP25.2■■□□□ 1.62
DES-201ENST00000373960 ZRSR1Q15695 479 aaKnown RBP25.2■■□□□ 1.62
DES-201ENST00000373960 OTUD7BQ6GQQ9 843 aa25.2■■□□□ 1.62
DES-201ENST00000373960 GPHNQ9NQX3 736 aaPredicted RBP25.2■■□□□ 1.62
DES-201ENST00000373960 CDHR2Q9BYE9 1310 aa25.2■■□□□ 1.62
DES-201ENST00000373960 FOXP2O15409 715 aa25.2■■□□□ 1.62
DES-201ENST00000373960 IFIT1P09914 478 aaKnown RBP25.2■■□□□ 1.62
DES-201ENST00000373960 CYP2C19P33261 490 aa25.2■■□□□ 1.62
DES-201ENST00000373960 DHX16O60231 1041 aaKnown RBP25.19■■□□□ 1.62
DES-201ENST00000373960 PDE4CQ08493 712 aa25.19■■□□□ 1.62
DES-201ENST00000373960 SYT10Q6XYQ8 523 aa25.19■■□□□ 1.62
DES-201ENST00000373960 OSBP2Q969R2 916 aa25.19■■□□□ 1.62
DES-201ENST00000373960 PUS3Q9BZE2 481 aaKnown RBP25.19■■□□□ 1.62
DES-201ENST00000373960 ITGA6P23229 1130 aa25.18■■□□□ 1.62
DES-201ENST00000373960 MB21D2Q8IYB1 491 aaPredicted RBP25.18■■□□□ 1.62
DES-201ENST00000373960 NOL10Q9BSC4 688 aaKnown RBP25.18■■□□□ 1.62
DES-201ENST00000373960 NYXQ9GZU5 481 aa25.18■■□□□ 1.62
DES-201ENST00000373960 TSPYL1Q9H0U9 437 aa25.18■■□□□ 1.62
DES-201ENST00000373960 HSD3B7Q9H2F3 369 aa25.18■■□□□ 1.62
DES-201ENST00000373960 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP25.18■■□□□ 1.62
DES-201ENST00000373960 EYA2O00167 538 aa25.18■■□□□ 1.62
DES-201ENST00000373960 ANO1Q5XXA6 986 aa25.18■■□□□ 1.62
DES-201ENST00000373960 IPO4Q8TEX9 1081 aaKnown RBP25.18■■□□□ 1.62
DES-201ENST00000373960 ORC3Q9UBD5 711 aaPredicted RBP25.18■■□□□ 1.62
DES-201ENST00000373960 PARP3Q9Y6F1 533 aa25.18■■□□□ 1.62
DES-201ENST00000373960 NRDCO43847 1150 aa25.17■■□□□ 1.62
DES-201ENST00000373960 CIAO1O76071 339 aa25.17■■□□□ 1.62
DES-201ENST00000373960 POLR3DP05423 398 aaPredicted RBP25.17■■□□□ 1.62
DES-201ENST00000373960 FANCCQ00597 558 aa25.17■■□□□ 1.62
DES-201ENST00000373960 TUBE1Q9UJT0 475 aa25.17■■□□□ 1.62
DES-201ENST00000373960 COL4A1P02462 1669 aa25.17■■□□□ 1.62
DES-201ENST00000373960 CCDC57Q2TAC2 916 aa25.17■■□□□ 1.62
DES-201ENST00000373960 LRRC24Q50LG9 513 aa25.17■■□□□ 1.62
DES-201ENST00000373960 PHLPP2Q6ZVD8 1323 aa25.17■■□□□ 1.62
DES-201ENST00000373960 KIF28PB7ZC32 967 aa25.16■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms