RNA–Protein interactions for RNA: ENST00000372105.3

LRIT1-201, Transcript of leucine rich repeat, Ig-like and transmembrane domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRIT1, Length 2,228 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT1-201ENST00000372105 PLA2G4AP47712 749 aa18.42■□□□□ 0.54
LRIT1-201ENST00000372105 C3orf67Q6ZVT6 689 aa18.42■□□□□ 0.54
LRIT1-201ENST00000372105 TMC6Q7Z403 805 aa18.42■□□□□ 0.54
LRIT1-201ENST00000372105 FCHSD1Q86WN1 690 aa18.42■□□□□ 0.54
LRIT1-201ENST00000372105 UBXN4Q92575 508 aa18.42■□□□□ 0.54
LRIT1-201ENST00000372105 FTOQ9C0B1 505 aaKnown RBP eCLIP18.42■□□□□ 0.54
LRIT1-201ENST00000372105 NYXQ9GZU5 481 aa18.42■□□□□ 0.54
LRIT1-201ENST00000372105 ST7Q9NRC1 585 aa18.42■□□□□ 0.54
LRIT1-201ENST00000372105 IFNKQ9P0W0 207 aa18.42■□□□□ 0.54
LRIT1-201ENST00000372105 ORC3Q9UBD5 711 aaPredicted RBP18.42■□□□□ 0.54
LRIT1-201ENST00000372105 PCDHA7Q9UN72 937 aa18.42■□□□□ 0.54
LRIT1-201ENST00000372105 COL24A1Q17RW2 1714 aa18.42■□□□□ 0.54
LRIT1-201ENST00000372105 IKBKBO14920 756 aa18.42■□□□□ 0.54
LRIT1-201ENST00000372105 CHGBP05060 677 aa18.42■□□□□ 0.54
LRIT1-201ENST00000372105 CDK11BP21127 795 aaKnown RBP18.42■□□□□ 0.54
LRIT1-201ENST00000372105 EXOSC10Q01780 885 aaKnown RBP18.42■□□□□ 0.54
LRIT1-201ENST00000372105 ZNF274Q96GC6 653 aaPredicted RBP18.42■□□□□ 0.54
LRIT1-201ENST00000372105 SMC2O95347 1197 aa18.41■□□□□ 0.54
LRIT1-201ENST00000372105 YEATS4O95619 227 aa18.41■□□□□ 0.54
LRIT1-201ENST00000372105 NLRP12P59046 1061 aa18.41■□□□□ 0.54
LRIT1-201ENST00000372105 SF3B3Q15393 1217 aaKnown RBP18.41■□□□□ 0.54
LRIT1-201ENST00000372105 SLC27A3Q5K4L6 730 aa18.41■□□□□ 0.54
LRIT1-201ENST00000372105 SLC10A5Q5PT55 438 aa18.41■□□□□ 0.54
LRIT1-201ENST00000372105 ILDR1Q86SU0 546 aaPredicted RBP18.41■□□□□ 0.54
LRIT1-201ENST00000372105 NBPF5PQ86XG9 351 aaPredicted RBP18.41■□□□□ 0.54
LRIT1-201ENST00000372105 KCNG4Q8TDN1 519 aa18.41■□□□□ 0.54
LRIT1-201ENST00000372105 ABCC12Q96J65 1359 aa18.41■□□□□ 0.54
LRIT1-201ENST00000372105 EFCAB8A8MWE9 144 aa18.41■□□□□ 0.54
LRIT1-201ENST00000372105 FKBP4Q02790 459 aaKnown RBP eCLIP18.41■□□□□ 0.54
LRIT1-201ENST00000372105 PUM3Q15397 648 aaKnown RBP18.41■□□□□ 0.54
LRIT1-201ENST00000372105 FBXL16Q8N461 479 aa18.41■□□□□ 0.54
LRIT1-201ENST00000372105 UBXN6Q9BZV1 441 aa18.41■□□□□ 0.54
LRIT1-201ENST00000372105 CASZ1Q86V15 1759 aa18.4■□□□□ 0.54
LRIT1-201ENST00000372105 ERICH4A6NGS2 130 aa18.4■□□□□ 0.54
LRIT1-201ENST00000372105 SCARF1Q14162 830 aa18.4■□□□□ 0.54
LRIT1-201ENST00000372105 DPCR1Q3MIW9 517 aa18.4■□□□□ 0.54
LRIT1-201ENST00000372105 NEDD4P46934 1319 aa18.4■□□□□ 0.54
LRIT1-201ENST00000372105 MYO1BO43795 1136 aa18.39■□□□□ 0.54
LRIT1-201ENST00000372105 FGFR2P21802 821 aa18.39■□□□□ 0.54
LRIT1-201ENST00000372105 STOX1Q6ZVD7 989 aa18.39■□□□□ 0.54
LRIT1-201ENST00000372105 LINC00301Q8NCQ3 95 aa18.39■□□□□ 0.54
LRIT1-201ENST00000372105 RGS22Q8NE09 1264 aa18.39■□□□□ 0.54
LRIT1-201ENST00000372105 LPIN2Q92539 896 aa18.39■□□□□ 0.54
LRIT1-201ENST00000372105 CDC5LQ99459 802 aaKnown RBP18.39■□□□□ 0.54
LRIT1-201ENST00000372105 DSCC1Q9BVC3 393 aa18.39■□□□□ 0.54
LRIT1-201ENST00000372105 DNAI1Q9UI46 699 aa18.39■□□□□ 0.54
LRIT1-201ENST00000372105 COL4A1P02462 1669 aa18.39■□□□□ 0.53
LRIT1-201ENST00000372105 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.39■□□□□ 0.53
LRIT1-201ENST00000372105 TADA3O75528 432 aa18.39■□□□□ 0.53
LRIT1-201ENST00000372105 ADRA2BP18089 450 aa18.39■□□□□ 0.53
LRIT1-201ENST00000372105 NCAPHQ15003 741 aa18.39■□□□□ 0.53
LRIT1-201ENST00000372105 LRRFIP1Q32MZ4 808 aaKnown RBP18.39■□□□□ 0.53
LRIT1-201ENST00000372105 TPTE2Q6XPS3 522 aa18.39■□□□□ 0.53
LRIT1-201ENST00000372105 HOMER1Q86YM7 354 aa18.39■□□□□ 0.53
LRIT1-201ENST00000372105 TXLNBQ8N3L3 684 aa18.39■□□□□ 0.53
LRIT1-201ENST00000372105 SEC62Q99442 399 aaKnown RBP18.39■□□□□ 0.53
LRIT1-201ENST00000372105 POLR3EQ9NVU0 708 aa18.39■□□□□ 0.53
LRIT1-201ENST00000372105 UBR3Q6ZT12 1888 aa18.38■□□□□ 0.53
LRIT1-201ENST00000372105 NPHP1O15259 732 aa18.38■□□□□ 0.53
LRIT1-201ENST00000372105 NDUFA8P51970 172 aa18.38■□□□□ 0.53
LRIT1-201ENST00000372105 MUM1L1Q5H9M0 696 aa18.38■□□□□ 0.53
LRIT1-201ENST00000372105 LRRN4CLQ8ND94 238 aa18.38■□□□□ 0.53
LRIT1-201ENST00000372105 TMX1Q9H3N1 280 aa18.38■□□□□ 0.53
LRIT1-201ENST00000372105 CARMIL3Q8ND23 1372 aa18.38■□□□□ 0.53
LRIT1-201ENST00000372105 A0A087WWV3 80 aa18.38■□□□□ 0.53
LRIT1-201ENST00000372105 CBFA2T2O43439 604 aa18.38■□□□□ 0.53
LRIT1-201ENST00000372105 SLC3A2P08195 630 aaKnown RBP18.38■□□□□ 0.53
LRIT1-201ENST00000372105 ZAP70P43403 619 aa18.38■□□□□ 0.53
LRIT1-201ENST00000372105 EVCP57679 992 aa18.38■□□□□ 0.53
LRIT1-201ENST00000372105 TRIM65Q6PJ69 517 aa18.38■□□□□ 0.53
LRIT1-201ENST00000372105 CCDC24Q8N4L8 307 aa18.38■□□□□ 0.53
LRIT1-201ENST00000372105 MNS1Q8NEH6 495 aa18.38■□□□□ 0.53
LRIT1-201ENST00000372105 HELLSQ9NRZ9 838 aa18.38■□□□□ 0.53
LRIT1-201ENST00000372105 ARAP2Q8WZ64 1704 aa18.37■□□□□ 0.53
LRIT1-201ENST00000372105 SLC5A1P13866 664 aa18.37■□□□□ 0.53
LRIT1-201ENST00000372105 HNRNPH2P55795 449 aaKnown RBP18.37■□□□□ 0.53
LRIT1-201ENST00000372105 APOBRQ0VD83 1088 aa18.37■□□□□ 0.53
LRIT1-201ENST00000372105 PI16Q6UXB8 463 aa18.37■□□□□ 0.53
LRIT1-201ENST00000372105 CCDC129Q6ZRS4 1044 aa18.37■□□□□ 0.53
LRIT1-201ENST00000372105 ANKRD18AQ8IVF6 992 aa18.37■□□□□ 0.53
LRIT1-201ENST00000372105 A0A1B0GVL5 298 aa18.37■□□□□ 0.53
LRIT1-201ENST00000372105 SNAP23O00161 211 aa18.37■□□□□ 0.53
LRIT1-201ENST00000372105 MCAMP43121 646 aa18.37■□□□□ 0.53
LRIT1-201ENST00000372105 FANCCQ00597 558 aa18.37■□□□□ 0.53
LRIT1-201ENST00000372105 TXNRD1Q16881 649 aa18.37■□□□□ 0.53
LRIT1-201ENST00000372105 CCDC102BQ68D86 513 aa18.37■□□□□ 0.53
LRIT1-201ENST00000372105 BRAPQ7Z569 592 aa18.37■□□□□ 0.53
LRIT1-201ENST00000372105 ZNF512BQ96KM6 892 aaPredicted RBP18.37■□□□□ 0.53
LRIT1-201ENST00000372105 NLRP3Q96P20 1036 aa18.37■□□□□ 0.53
LRIT1-201ENST00000372105 RNF113AO15541 343 aaKnown RBP18.36■□□□□ 0.53
LRIT1-201ENST00000372105 ZSCAN12O43309 604 aa18.36■□□□□ 0.53
LRIT1-201ENST00000372105 RXRBP28702 533 aa18.36■□□□□ 0.53
LRIT1-201ENST00000372105 PDIA3P30101 505 aaKnown RBP18.36■□□□□ 0.53
LRIT1-201ENST00000372105 PHKA1P46020 1223 aa18.36■□□□□ 0.53
LRIT1-201ENST00000372105 CHRNDQ07001 517 aa18.36■□□□□ 0.53
LRIT1-201ENST00000372105 NFIXQ14938 502 aa18.36■□□□□ 0.53
LRIT1-201ENST00000372105 STK38Q15208 465 aa18.36■□□□□ 0.53
LRIT1-201ENST00000372105 LRRC2Q9BYS8 371 aa18.36■□□□□ 0.53
LRIT1-201ENST00000372105 TAF1P21675 1872 aa18.36■□□□□ 0.53
LRIT1-201ENST00000372105 GOLGA6L9A6NEM1 432 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms