RNA–Protein interactions for RNA: ENST00000364351.1

RNU4-40P-201, Transcript of RNA, U4 small nuclear 40, pseudogene, humanhuman

BASIC

Gene RNU4-40P, Length 143 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-40P-201ENST00000364351 AOC3Q16853 763 aa9.08□□□□□ -0.96
RNU4-40P-201ENST00000364351 PDZD3Q86UT5 571 aa9.08□□□□□ -0.96
RNU4-40P-201ENST00000364351 SULF2Q8IWU5 870 aa9.08□□□□□ -0.96
RNU4-40P-201ENST00000364351 STK35Q8TDR2 534 aa9.08□□□□□ -0.96
RNU4-40P-201ENST00000364351 ALKBH8Q96BT7 664 aaKnown RBP9.08□□□□□ -0.96
RNU4-40P-201ENST00000364351 DUSP23Q9BVJ7 150 aa9.08□□□□□ -0.96
RNU4-40P-201ENST00000364351 RBCK1Q9BYM8 510 aa9.08□□□□□ -0.96
RNU4-40P-201ENST00000364351 AKAP2Q9Y2D5 859 aa9.08□□□□□ -0.96
RNU4-40P-201ENST00000364351 CARMIL2Q6F5E8 1435 aa9.07□□□□□ -0.96
RNU4-40P-201ENST00000364351 NEFMP07197 916 aa9.07□□□□□ -0.96
RNU4-40P-201ENST00000364351 RNASE1P07998 156 aaKnown RBP9.07□□□□□ -0.96
RNU4-40P-201ENST00000364351 IFI16Q16666 785 aaKnown RBP9.07□□□□□ -0.96
RNU4-40P-201ENST00000364351 ZNF648Q5T619 568 aaPredicted RBP9.07□□□□□ -0.96
RNU4-40P-201ENST00000364351 PI4K2BQ8TCG2 481 aa9.07□□□□□ -0.96
RNU4-40P-201ENST00000364351 BCO2Q9BYV7 579 aa9.07□□□□□ -0.96
RNU4-40P-201ENST00000364351 ARNTP27540 789 aa9.06□□□□□ -0.96
RNU4-40P-201ENST00000364351 OXCT1P55809 520 aa9.06□□□□□ -0.96
RNU4-40P-201ENST00000364351 MAP1SQ66K74 1059 aaPredicted RBP9.06□□□□□ -0.96
RNU4-40P-201ENST00000364351 ATG4DQ86TL0 474 aaPredicted RBP9.06□□□□□ -0.96
RNU4-40P-201ENST00000364351 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.06□□□□□ -0.96
RNU4-40P-201ENST00000364351 TOP6BLQ8N6T0 577 aa9.06□□□□□ -0.96
RNU4-40P-201ENST00000364351 CCER1Q8TC90 406 aaPredicted RBP9.06□□□□□ -0.96
RNU4-40P-201ENST00000364351 ISL2Q96A47 359 aa9.06□□□□□ -0.96
RNU4-40P-201ENST00000364351 HRASLS5Q96KN8 279 aa9.06□□□□□ -0.96
RNU4-40P-201ENST00000364351 MBNL3Q9NUK0 354 aaKnown RBP9.06□□□□□ -0.96
RNU4-40P-201ENST00000364351 ADAMTS6Q9UKP5 1117 aa9.06□□□□□ -0.96
RNU4-40P-201ENST00000364351 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.06□□□□□ -0.96
RNU4-40P-201ENST00000364351 CEACAM5P06731 702 aa9.05□□□□□ -0.96
RNU4-40P-201ENST00000364351 XRCC5P13010 732 aaKnown RBP9.05□□□□□ -0.96
RNU4-40P-201ENST00000364351 ZC3H12AQ5D1E8 599 aaKnown RBP9.05□□□□□ -0.96
RNU4-40P-201ENST00000364351 MKNK2Q9HBH9 465 aa9.05□□□□□ -0.96
RNU4-40P-201ENST00000364351 PLAGL2Q9UPG8 496 aa9.05□□□□□ -0.96
RNU4-40P-201ENST00000364351 TMEM265A0A087WTH1 108 aa9.04□□□□□ -0.96
RNU4-40P-201ENST00000364351 ITIH2P19823 946 aa9.04□□□□□ -0.96
RNU4-40P-201ENST00000364351 NXPE4Q6UWF7 544 aa9.04□□□□□ -0.96
RNU4-40P-201ENST00000364351 TMC7Q7Z402 723 aa9.04□□□□□ -0.96
RNU4-40P-201ENST00000364351 RNF214Q8ND24 703 aa9.04□□□□□ -0.96
RNU4-40P-201ENST00000364351 FAM168AQ92567 244 aa9.04□□□□□ -0.96
RNU4-40P-201ENST00000364351 ARID3AQ99856 593 aa9.04□□□□□ -0.96
RNU4-40P-201ENST00000364351 CBX8Q9HC52 389 aa9.04□□□□□ -0.96
RNU4-40P-201ENST00000364351 ARID1BQ8NFD5 2236 aaPredicted RBP9.03□□□□□ -0.96
RNU4-40P-201ENST00000364351 LRRN4CLQ8ND94 238 aa9.03□□□□□ -0.96
RNU4-40P-201ENST00000364351 GPBAR1Q8TDU6 330 aa9.03□□□□□ -0.96
RNU4-40P-201ENST00000364351 ACSBG1Q96GR2 724 aa9.03□□□□□ -0.96
RNU4-40P-201ENST00000364351 EMILIN2Q9BXX0 1053 aa9.03□□□□□ -0.96
RNU4-40P-201ENST00000364351 NME2P22392 152 aa9.02□□□□□ -0.97
RNU4-40P-201ENST00000364351 ERVK-24P63145 666 aa9.02□□□□□ -0.97
RNU4-40P-201ENST00000364351 ZNF124Q15973 351 aa9.02□□□□□ -0.97
RNU4-40P-201ENST00000364351 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.02□□□□□ -0.97
RNU4-40P-201ENST00000364351 LCE1DQ5T752 114 aa9.02□□□□□ -0.97
RNU4-40P-201ENST00000364351 BIN2Q9UBW5 565 aaPredicted RBP9.02□□□□□ -0.97
RNU4-40P-201ENST00000364351 CSADQ9Y600 493 aa9.02□□□□□ -0.97
RNU4-40P-201ENST00000364351 MPRIPQ6WCQ1 1025 aa9.01□□□□□ -0.97
RNU4-40P-201ENST00000364351 RETREG2Q8NC44 543 aa9.01□□□□□ -0.97
RNU4-40P-201ENST00000364351 PNMA6FA0A0J9YX94 578 aa9□□□□□ -0.97
RNU4-40P-201ENST00000364351 SOWAHDA6NJG2 315 aa9□□□□□ -0.97
RNU4-40P-201ENST00000364351 FARP2O94887 1054 aaPredicted RBP9□□□□□ -0.97
RNU4-40P-201ENST00000364351 PPM1JQ5JR12 505 aa9□□□□□ -0.97
RNU4-40P-201ENST00000364351 ANGEL2Q5VTE6 544 aaKnown RBP9□□□□□ -0.97
RNU4-40P-201ENST00000364351 HEXIM2Q96MH2 286 aaKnown RBP9□□□□□ -0.97
RNU4-40P-201ENST00000364351 PLCB3Q01970 1234 aa8.99□□□□□ -0.97
RNU4-40P-201ENST00000364351 ZNF252P-AS1Q0IIN9 211 aa8.99□□□□□ -0.97
RNU4-40P-201ENST00000364351 PICK1Q9NRD5 415 aa8.99□□□□□ -0.97
RNU4-40P-201ENST00000364351 PDE4CQ08493 712 aa8.98□□□□□ -0.97
RNU4-40P-201ENST00000364351 TPTE2Q6XPS3 522 aa8.98□□□□□ -0.97
RNU4-40P-201ENST00000364351 GRIN3AQ8TCU5 1115 aa8.98□□□□□ -0.97
RNU4-40P-201ENST00000364351 TMEM40Q8WWA1 233 aa8.98□□□□□ -0.97
RNU4-40P-201ENST00000364351 TNKS2Q9H2K2 1166 aa8.98□□□□□ -0.97
RNU4-40P-201ENST00000364351 PRDM7Q9NQW5 492 aa8.98□□□□□ -0.97
RNU4-40P-201ENST00000364351 GTF2IRD1Q9UHL9 959 aa8.98□□□□□ -0.97
RNU4-40P-201ENST00000364351 DCTN4Q9UJW0 460 aa8.98□□□□□ -0.97
RNU4-40P-201ENST00000364351 SNX11Q9Y5W9 270 aa8.98□□□□□ -0.97
RNU4-40P-201ENST00000364351 DCDC2CA8MYV0 355 aa8.97□□□□□ -0.97
RNU4-40P-201ENST00000364351 SLC23A3Q6PIS1 610 aa8.97□□□□□ -0.97
RNU4-40P-201ENST00000364351 FAM214BQ7L5A3 538 aa8.97□□□□□ -0.97
RNU4-40P-201ENST00000364351 C12orf40Q86WS4 652 aa8.97□□□□□ -0.97
RNU4-40P-201ENST00000364351 NECAB3Q96P71 396 aaPredicted RBP8.97□□□□□ -0.97
RNU4-40P-201ENST00000364351 PRDM10Q9NQV6 1147 aa8.97□□□□□ -0.97
RNU4-40P-201ENST00000364351 DSC3Q14574 896 aa8.96□□□□□ -0.98
RNU4-40P-201ENST00000364351 BMP6P22004 513 aa8.95□□□□□ -0.98
RNU4-40P-201ENST00000364351 IKZF1Q13422 519 aa8.95□□□□□ -0.98
RNU4-40P-201ENST00000364351 ENOX2Q16206 610 aaKnown RBP8.95□□□□□ -0.98
RNU4-40P-201ENST00000364351 PKN1Q16512 942 aa8.95□□□□□ -0.98
RNU4-40P-201ENST00000364351 UBE3DQ7Z6J8 389 aa8.95□□□□□ -0.98
RNU4-40P-201ENST00000364351 KSR1Q8IVT5 923 aa8.95□□□□□ -0.98
RNU4-40P-201ENST00000364351 C3orf58Q8NDZ4 430 aa8.95□□□□□ -0.98
RNU4-40P-201ENST00000364351 ASB11Q8WXH4 323 aa8.95□□□□□ -0.98
RNU4-40P-201ENST00000364351 CACNA2D2Q9NY47 1150 aa8.95□□□□□ -0.98
RNU4-40P-201ENST00000364351 SAMM50Q9Y512 469 aa8.95□□□□□ -0.98
RNU4-40P-201ENST00000364351 PAGE1O75459 146 aa8.94□□□□□ -0.98
RNU4-40P-201ENST00000364351 MAPK1P28482 360 aa8.94□□□□□ -0.98
RNU4-40P-201ENST00000364351 ZP2Q05996 745 aa8.94□□□□□ -0.98
RNU4-40P-201ENST00000364351 CDC37L1Q7L3B6 337 aa8.94□□□□□ -0.98
RNU4-40P-201ENST00000364351 DBX1A6NMT0 343 aa8.93□□□□□ -0.98
RNU4-40P-201ENST00000364351 IGF2BP3O00425 579 aaKnown RBP eCLIP8.93□□□□□ -0.98
RNU4-40P-201ENST00000364351 ENC1O14682 589 aa8.93□□□□□ -0.98
RNU4-40P-201ENST00000364351 TREHO43280 583 aa8.93□□□□□ -0.98
RNU4-40P-201ENST00000364351 FBXO24O75426 580 aa8.93□□□□□ -0.98
RNU4-40P-201ENST00000364351 GSTT1P30711 240 aa8.93□□□□□ -0.98
RNU4-40P-201ENST00000364351 NTF4P34130 210 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms