RNA–Protein interactions for RNA: ENST00000329397.5

PTP4A3-201, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTP4A3, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-201ENST00000329397 PCDHA5Q9Y5H7 936 aa20.03■□□□□ 0.8
PTP4A3-201ENST00000329397 PARP4Q9UKK3 1724 aaKnown RBP20.03■□□□□ 0.8
PTP4A3-201ENST00000329397 BTBD18B2RXH4 712 aa20.02■□□□□ 0.8
PTP4A3-201ENST00000329397 NTRK3Q16288 839 aa20.02■□□□□ 0.8
PTP4A3-201ENST00000329397 ZNF771Q7L3S4 317 aaPredicted RBP20.02■□□□□ 0.8
PTP4A3-201ENST00000329397 PIGBQ92521 554 aa20.02■□□□□ 0.8
PTP4A3-201ENST00000329397 AIDAQ96BJ3 306 aa20.02■□□□□ 0.8
PTP4A3-201ENST00000329397 LY9Q9HBG7 655 aa20.02■□□□□ 0.8
PTP4A3-201ENST00000329397 ZNF446Q9NWS9 450 aa20.02■□□□□ 0.8
PTP4A3-201ENST00000329397 HPSEQ9Y251 543 aa20.02■□□□□ 0.8
PTP4A3-201ENST00000329397 DDX60Q8IY21 1712 aaKnown RBP20.02■□□□□ 0.8
PTP4A3-201ENST00000329397 PRKAB2O43741 272 aa20.02■□□□□ 0.8
PTP4A3-201ENST00000329397 CADPS2Q86UW7 1296 aa20.02■□□□□ 0.8
PTP4A3-201ENST00000329397 NLRP10Q86W26 655 aa20.02■□□□□ 0.8
PTP4A3-201ENST00000329397 TRMT44Q8IYL2 757 aaKnown RBP20.02■□□□□ 0.8
PTP4A3-201ENST00000329397 PDILTQ8N807 584 aa20.02■□□□□ 0.8
PTP4A3-201ENST00000329397 CNNM3Q8NE01 707 aa20.02■□□□□ 0.8
PTP4A3-201ENST00000329397 IGDCC4Q8TDY8 1250 aa20.02■□□□□ 0.8
PTP4A3-201ENST00000329397 ARMT1Q9H993 441 aa20.02■□□□□ 0.8
PTP4A3-201ENST00000329397 BCCIPQ9P287 314 aaKnown RBP eCLIP20.02■□□□□ 0.8
PTP4A3-201ENST00000329397 ECM29Q5VYK3 1845 aa20.02■□□□□ 0.79
PTP4A3-201ENST00000329397 IRS4O14654 1257 aaPredicted RBP20.01■□□□□ 0.79
PTP4A3-201ENST00000329397 MYL5Q02045 173 aa20.01■□□□□ 0.79
PTP4A3-201ENST00000329397 ZSWIM5Q9P217 1185 aa20.01■□□□□ 0.79
PTP4A3-201ENST00000329397 TRMT112Q9UI30 125 aaKnown RBP20.01■□□□□ 0.79
PTP4A3-201ENST00000329397 TBC1D2BQ9UPU7 963 aa20.01■□□□□ 0.79
PTP4A3-201ENST00000329397 CTSWP56202 376 aa20.01■□□□□ 0.79
PTP4A3-201ENST00000329397 TUBE1Q9UJT0 475 aa20.01■□□□□ 0.79
PTP4A3-201ENST00000329397 ANKRD18BA2A2Z9 1011 aa20■□□□□ 0.79
PTP4A3-201ENST00000329397 IFIT3O14879 490 aaKnown RBP20■□□□□ 0.79
PTP4A3-201ENST00000329397 MBD4O95243 580 aa20■□□□□ 0.79
PTP4A3-201ENST00000329397 PRR29P0C7W0 189 aa20■□□□□ 0.79
PTP4A3-201ENST00000329397 MAGEB6Q8N7X4 407 aa20■□□□□ 0.79
PTP4A3-201ENST00000329397 VGLL2Q8N8G2 317 aa20■□□□□ 0.79
PTP4A3-201ENST00000329397 GNL3Q9BVP2 549 aaKnown RBP eCLIP20■□□□□ 0.793e-6■□□□□ 10.9
PTP4A3-201ENST00000329397 KCNH3Q9ULD8 1083 aa20■□□□□ 0.79
PTP4A3-201ENST00000329397 SMIM22K7EJ46 135 aa20■□□□□ 0.79
PTP4A3-201ENST00000329397 TRIM29Q14134 588 aa20■□□□□ 0.79
PTP4A3-201ENST00000329397 BRINP3Q76B58 766 aa20■□□□□ 0.79
PTP4A3-201ENST00000329397 EPC1Q9H2F5 836 aa20■□□□□ 0.79
PTP4A3-201ENST00000329397 INTS13Q9NVM9 706 aa20■□□□□ 0.79
PTP4A3-201ENST00000329397 EVA1CP58658 441 aa20■□□□□ 0.79
PTP4A3-201ENST00000329397 RESP18Q5W5W9 173 aa20■□□□□ 0.79
PTP4A3-201ENST00000329397 STRBPQ96SI9 672 aaKnown RBP20■□□□□ 0.79
PTP4A3-201ENST00000329397 MORC2Q9Y6X9 1032 aaPredicted RBP20■□□□□ 0.79
PTP4A3-201ENST00000329397 COL5A2P05997 1499 aaPredicted RBP19.99■□□□□ 0.79
PTP4A3-201ENST00000329397 NR5A1Q13285 461 aa19.99■□□□□ 0.79
PTP4A3-201ENST00000329397 NKX1-1Q15270 411 aaPredicted RBP19.99■□□□□ 0.79
PTP4A3-201ENST00000329397 CPLX2Q6PUV4 134 aaKnown RBP19.99■□□□□ 0.79
PTP4A3-201ENST00000329397 GIGYF2Q6Y7W6 1299 aaKnown RBP19.99■□□□□ 0.79
PTP4A3-201ENST00000329397 TICAM2Q86XR7 235 aa19.99■□□□□ 0.79
PTP4A3-201ENST00000329397 SLC12A7Q9Y666 1083 aa19.99■□□□□ 0.79
PTP4A3-201ENST00000329397 MAP3K15Q6ZN16 1313 aa19.99■□□□□ 0.79
PTP4A3-201ENST00000329397 PDE8BO95263 885 aa19.99■□□□□ 0.79
PTP4A3-201ENST00000329397 NAPBQ9H115 298 aa19.99■□□□□ 0.79
PTP4A3-201ENST00000329397 ZBTB1Q9Y2K1 713 aa19.99■□□□□ 0.79
PTP4A3-201ENST00000329397 TNS2Q63HR2 1409 aa19.98■□□□□ 0.79
PTP4A3-201ENST00000329397 TCRBV5S4A2TA0A5A2 114 aa19.98■□□□□ 0.79
PTP4A3-201ENST00000329397 PSDA5PKW4 1024 aaPredicted RBP19.98■□□□□ 0.79
PTP4A3-201ENST00000329397 IKBKBO14920 756 aa19.98■□□□□ 0.79
PTP4A3-201ENST00000329397 CDKL5O76039 1030 aa19.98■□□□□ 0.79
PTP4A3-201ENST00000329397 KRBA2Q6ZNG9 492 aa19.98■□□□□ 0.79
PTP4A3-201ENST00000329397 USP49Q70CQ1 688 aa19.98■□□□□ 0.79
PTP4A3-201ENST00000329397 CNPY4Q8N129 248 aa19.98■□□□□ 0.79
PTP4A3-201ENST00000329397 IQSEC3Q9UPP2 1182 aaPredicted RBP19.98■□□□□ 0.79
PTP4A3-201ENST00000329397 PPP6R2O75170 966 aa19.98■□□□□ 0.79
PTP4A3-201ENST00000329397 TOP1P11387 765 aaKnown RBP19.98■□□□□ 0.79
PTP4A3-201ENST00000329397 TOB1P50616 345 aaPredicted RBP19.98■□□□□ 0.79
PTP4A3-201ENST00000329397 FMR1Q06787 632 aaKnown RBP eCLIP19.98■□□□□ 0.79
PTP4A3-201ENST00000329397 PLA2G12BQ9BX93 195 aa19.98■□□□□ 0.79
PTP4A3-201ENST00000329397 L2HGDHQ9H9P8 463 aa19.98■□□□□ 0.79
PTP4A3-201ENST00000329397 hCG_1642624A0A1W2PR95 340 aa19.97■□□□□ 0.79
PTP4A3-201ENST00000329397 TRIM28Q13263 835 aaKnown RBP19.97■□□□□ 0.79
PTP4A3-201ENST00000329397 ARHGAP29Q52LW3 1261 aa19.97■□□□□ 0.79
PTP4A3-201ENST00000329397 IFNL3Q8IZI9 196 aa19.97■□□□□ 0.79
PTP4A3-201ENST00000329397 JMYQ8N9B5 988 aa19.97■□□□□ 0.79
PTP4A3-201ENST00000329397 MIGA1Q8NAN2 632 aa19.97■□□□□ 0.79
PTP4A3-201ENST00000329397 SLC4A9Q96Q91 983 aa19.97■□□□□ 0.79
PTP4A3-201ENST00000329397 KCND1Q9NSA2 647 aa19.97■□□□□ 0.79
PTP4A3-201ENST00000329397 RNF216Q9NWF9 866 aaPredicted RBP19.97■□□□□ 0.79
PTP4A3-201ENST00000329397 KCNG1Q9UIX4 513 aa19.97■□□□□ 0.79
PTP4A3-201ENST00000329397 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP19.97■□□□□ 0.793e-6■□□□□ 9.4
PTP4A3-201ENST00000329397 TOGARAM1Q9Y4F4 1720 aa19.97■□□□□ 0.79
PTP4A3-201ENST00000329397 URI1O94763 535 aaPredicted RBP19.97■□□□□ 0.79
PTP4A3-201ENST00000329397 OLFM4Q6UX06 510 aa19.97■□□□□ 0.79
PTP4A3-201ENST00000329397 DIS3L2Q8IYB7 885 aaKnown RBP19.97■□□□□ 0.79
PTP4A3-201ENST00000329397 NUP133Q8WUM0 1156 aa19.97■□□□□ 0.79
PTP4A3-201ENST00000329397 SEC31BQ9NQW1 1179 aa19.97■□□□□ 0.79
PTP4A3-201ENST00000329397 FBXO3Q9UK99 471 aa19.97■□□□□ 0.79
PTP4A3-201ENST00000329397 A0A0G2JS52 829 aa19.96■□□□□ 0.79
PTP4A3-201ENST00000329397 POLR2DO15514 142 aaKnown RBP19.96■□□□□ 0.79
PTP4A3-201ENST00000329397 ADKP55263 362 aaKnown RBP19.96■□□□□ 0.79
PTP4A3-201ENST00000329397 ETF1P62495 437 aaKnown RBP19.96■□□□□ 0.79
PTP4A3-201ENST00000329397 SSRP1Q08945 709 aaKnown RBP19.96■□□□□ 0.79
PTP4A3-201ENST00000329397 RASGRF1Q13972 1273 aa19.96■□□□□ 0.79
PTP4A3-201ENST00000329397 UBE3CQ15386 1083 aa19.96■□□□□ 0.79
PTP4A3-201ENST00000329397 KRT222Q8N1A0 295 aa19.96■□□□□ 0.79
PTP4A3-201ENST00000329397 OXER1Q8TDS5 423 aa19.96■□□□□ 0.79
PTP4A3-201ENST00000329397 TIGD1Q96MW7 591 aa19.96■□□□□ 0.79
PTP4A3-201ENST00000329397 CCDC93Q567U6 631 aa19.96■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms