RNA–Protein interactions for RNA: ENST00000299957.10

CASC4-201, Transcript of cancer susceptibility 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CASC4, Length 3,962 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-201ENST00000299957 AKR1B10O60218 316 aa15.13■□□□□ 0.01
CASC4-201ENST00000299957 CTAGE8P0CG41 777 aa15.13■□□□□ 0.01
CASC4-201ENST00000299957 ETF1P62495 437 aaKnown RBP15.13■□□□□ 0.01
CASC4-201ENST00000299957 POSTNQ15063 836 aa15.13■□□□□ 0.01
CASC4-201ENST00000299957 ZMYM1Q5SVZ6 1142 aa15.13■□□□□ 0.01
CASC4-201ENST00000299957 CTAGE6Q86UF2 777 aa15.13■□□□□ 0.01
CASC4-201ENST00000299957 CTAGE4Q8IX94 777 aa15.13■□□□□ 0.01
CASC4-201ENST00000299957 MRFAP1L1Q96HT8 127 aa15.13■□□□□ 0.01
CASC4-201ENST00000299957 PPP1R13BQ96KQ4 1090 aa15.13■□□□□ 0.01
CASC4-201ENST00000299957 MCM9Q9NXL9 1143 aa15.13■□□□□ 0.01
CASC4-201ENST00000299957 ALKQ9UM73 1620 aa15.13■□□□□ 0.01
CASC4-201ENST00000299957 UQCRFS1P1P0C7P4 283 aa15.12■□□□□ 0.01
CASC4-201ENST00000299957 RBM5P52756 815 aaKnown RBP eCLIP15.12■□□□□ 0.01
CASC4-201ENST00000299957 SMARCC1Q92922 1105 aaPredicted RBP15.12■□□□□ 0.01
CASC4-201ENST00000299957 MMRN2Q9H8L6 949 aa15.12■□□□□ 0.01
CASC4-201ENST00000299957 BCCIPQ9P287 314 aaKnown RBP eCLIP15.12■□□□□ 0.01
CASC4-201ENST00000299957 A2ML1A8K2U0 1454 aa15.12■□□□□ 0.01
CASC4-201ENST00000299957 IQGAP1P46940 1657 aa15.12■□□□□ 0.01
CASC4-201ENST00000299957 CYP2D7A0A087X1C5 515 aa15.12■□□□□ 0.01
CASC4-201ENST00000299957 AKR1B15C9JRZ8 316 aaPredicted RBP15.12■□□□□ 0.01
CASC4-201ENST00000299957 FOXN1O15353 648 aa15.12■□□□□ 0.01
CASC4-201ENST00000299957 PDE6AP16499 860 aa15.12■□□□□ 0.01
CASC4-201ENST00000299957 CCDC96Q2M329 555 aa15.12■□□□□ 0.01
CASC4-201ENST00000299957 ODF2Q5BJF6 829 aa15.12■□□□□ 0.01
CASC4-201ENST00000299957 ZFYVE27Q5T4F4 411 aa15.12■□□□□ 0.01
CASC4-201ENST00000299957 ZNF274Q96GC6 653 aaPredicted RBP15.12■□□□□ 0.01
CASC4-201ENST00000299957 CYP27B1O15528 508 aa15.12■□□□□ 0.01
CASC4-201ENST00000299957 ZNF710Q8N1W2 664 aa15.12■□□□□ 0.01
CASC4-201ENST00000299957 GOLGA1Q92805 767 aa15.12■□□□□ 0.01
CASC4-201ENST00000299957 KAT14Q9H8E8 782 aa15.12■□□□□ 0.01
CASC4-201ENST00000299957 MAGEB6P1A0A0J9YX57 407 aa15.11■□□□□ 0.01
CASC4-201ENST00000299957 PTPROQ16827 1216 aa15.11■□□□□ 0.01
CASC4-201ENST00000299957 CADPS2Q86UW7 1296 aa15.11■□□□□ 0.01
CASC4-201ENST00000299957 CTAGE9A4FU28 777 aa15.11■□□□□ 0.01
CASC4-201ENST00000299957 ASIC1P78348 528 aa15.11■□□□□ 0.01
CASC4-201ENST00000299957 KRBA2Q6ZNG9 492 aa15.11■□□□□ 0.01
CASC4-201ENST00000299957 SAMSN1Q9NSI8 373 aaKnown RBP15.11■□□□□ 0.01
CASC4-201ENST00000299957 BTG4Q9NY30 223 aa15.11■□□□□ 0.01
CASC4-201ENST00000299957 ANKRD65E5RJM6 399 aa15.11■□□□□ 0.01
CASC4-201ENST00000299957 UBE2Q2LH0YL09 131 aa15.11■□□□□ 0.01
CASC4-201ENST00000299957 ZBTB22O15209 634 aa15.11■□□□□ 0.01
CASC4-201ENST00000299957 ZPR1O75312 459 aa15.11■□□□□ 0.01
CASC4-201ENST00000299957 GYG1P46976 350 aa15.11■□□□□ 0.01
CASC4-201ENST00000299957 EIF6P56537 245 aaKnown RBP15.11■□□□□ 0.01
CASC4-201ENST00000299957 CTR9Q6PD62 1173 aa15.11■□□□□ 0.01
CASC4-201ENST00000299957 KRT9P35527 623 aa15.1■□□□□ 0.01
CASC4-201ENST00000299957 TCERG1LQ5VWI1 586 aa15.1■□□□□ 0.01
CASC4-201ENST00000299957 MYO3AQ8NEV4 1616 aa15.1■□□□□ 0.01
CASC4-201ENST00000299957 ATP2C2O75185 946 aa15.1■□□□□ 0.01
CASC4-201ENST00000299957 ZMYND10O75800 440 aa15.1■□□□□ 0.01
CASC4-201ENST00000299957 AATFQ9NY61 560 aaKnown RBP eCLIP15.1■□□□□ 0.01
CASC4-201ENST00000299957 OAS2P29728 719 aaKnown RBP15.1■□□□□ 0.01
CASC4-201ENST00000299957 MRPS25P82663 173 aaKnown RBP15.1■□□□□ 0.01
CASC4-201ENST00000299957 TCIRG1Q13488 830 aa15.1■□□□□ 0.01
CASC4-201ENST00000299957 HLTFQ14527 1009 aaKnown RBP eCLIP15.1■□□□□ 0.01
CASC4-201ENST00000299957 APOA5Q6Q788 366 aa15.1■□□□□ 0.01
CASC4-201ENST00000299957 SEC31BQ9NQW1 1179 aa15.1■□□□□ 0.01
CASC4-201ENST00000299957 ADGRB1O14514 1584 aa15.1■□□□□ 0.01
CASC4-201ENST00000299957 RAD51AP2Q09MP3 1159 aa15.09■□□□□ 0.01
CASC4-201ENST00000299957 SAP30BPQ9UHR5 308 aaKnown RBP15.09■□□□□ 0.01
CASC4-201ENST00000299957 TSPOAP1O95153 1857 aa15.09■□□□□ 0.01
CASC4-201ENST00000299957 CHMP4BP1P59074 171 aa15.09■□□□□ 0.01
CASC4-201ENST00000299957 KIF23Q02241 960 aaPredicted RBP15.09■□□□□ 0.01
CASC4-201ENST00000299957 KAZALD1Q96I82 304 aa15.09■□□□□ 0.01
CASC4-201ENST00000299957 IRX2Q9BZI1 471 aaPredicted RBP15.09■□□□□ 0.01
CASC4-201ENST00000299957 PPP2R2CQ9Y2T4 447 aa15.09■□□□□ 0.01
CASC4-201ENST00000299957 ST3GAL1Q11201 340 aa15.09■□□□□ 0.01
CASC4-201ENST00000299957 TAX1BP1Q86VP1 789 aa15.09■□□□□ 0.01
CASC4-201ENST00000299957 TCP11L1Q9NUJ3 509 aa15.09■□□□□ 0.01
CASC4-201ENST00000299957 RTEL1Q9NZ71 1219 aa15.09■□□□□ 0.01
CASC4-201ENST00000299957 ENC1O14682 589 aa15.09■□□□□ 0.01
CASC4-201ENST00000299957 CMA1P23946 247 aa15.09■□□□□ 0.01
CASC4-201ENST00000299957 DMTNQ08495 405 aa15.09■□□□□ 0.01
CASC4-201ENST00000299957 CNNM2Q9H8M5 875 aa15.09■□□□□ 0.01
CASC4-201ENST00000299957 KRT2P35908 639 aa15.08■□□□□ 0
CASC4-201ENST00000299957 LETM2Q2VYF4 491 aa15.08■□□□□ 0
CASC4-201ENST00000299957 KMT5BQ4FZB7 885 aa15.08■□□□□ 0
CASC4-201ENST00000299957 CCDC152Q4G0S7 254 aa15.08■□□□□ 0
CASC4-201ENST00000299957 CCDC122Q5T0U0 273 aa15.08■□□□□ 0
CASC4-201ENST00000299957 SPATA5Q8NB90 893 aa15.08■□□□□ 0
CASC4-201ENST00000299957 RASGRP4Q8TDF6 673 aa15.08■□□□□ 0
CASC4-201ENST00000299957 ERBB3P21860 1342 aa15.08■□□□□ 0
CASC4-201ENST00000299957 CAMSAP1Q5T5Y3 1602 aa15.08■□□□□ 0
CASC4-201ENST00000299957 SPECC1LQ69YQ0 1117 aa15.08■□□□□ 0
CASC4-201ENST00000299957 KANK3Q6NY19 840 aa15.08■□□□□ 0
CASC4-201ENST00000299957 ANKRD18AQ8IVF6 992 aa15.08■□□□□ 0
CASC4-201ENST00000299957 NOSTRINQ8IVI9 506 aa15.08■□□□□ 0
CASC4-201ENST00000299957 IFNL3Q8IZI9 196 aa15.08■□□□□ 0
CASC4-201ENST00000299957 DPF2Q92785 391 aa15.08■□□□□ 0
CASC4-201ENST00000299957 SEC63Q9UGP8 760 aaKnown RBP15.08■□□□□ 0
CASC4-201ENST00000299957 LAMC1P11047 1609 aa15.08■□□□□ 0
CASC4-201ENST00000299957 ARHGAP6O43182 974 aa15.08■□□□□ 0
CASC4-201ENST00000299957 NOP2P46087 812 aaKnown RBP15.08■□□□□ 0
CASC4-201ENST00000299957 RILPL1Q5EBL4 403 aa15.08■□□□□ 0
CASC4-201ENST00000299957 CT47A1Q5JQC4 288 aaPredicted RBP15.08■□□□□ 0
CASC4-201ENST00000299957 NEO1Q92859 1461 aa15.07■□□□□ 0
CASC4-201ENST00000299957 CUTAO60888 179 aa15.07■□□□□ 0
CASC4-201ENST00000299957 PICALMQ13492 652 aa15.07■□□□□ 0
CASC4-201ENST00000299957 WWC2Q6AWC2 1192 aa15.07■□□□□ 0
CASC4-201ENST00000299957 CCDC43Q96MW1 224 aaKnown RBP15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms