RNA–Protein interactions for RNA: ENST00000298281.8

PCF11-201, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCF11, Length 7,677 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-201ENST00000298281 ZC4H2Q9NQZ6 224 aa13.44□□□□□ -0.26
PCF11-201ENST00000298281 TRIM35Q9UPQ4 493 aa13.44□□□□□ -0.26
PCF11-201ENST00000298281 NPHP3Q7Z494 1330 aa13.44□□□□□ -0.26
PCF11-201ENST00000298281 NOP56O00567 594 aaKnown RBP13.44□□□□□ -0.26
PCF11-201ENST00000298281 SYT1P21579 422 aa13.44□□□□□ -0.26
PCF11-201ENST00000298281 TNNC1P63316 161 aa13.44□□□□□ -0.26
PCF11-201ENST00000298281 DTHD1Q6ZMT9 781 aa13.44□□□□□ -0.26
PCF11-201ENST00000298281 KIFAP3Q92845 792 aa13.44□□□□□ -0.26
PCF11-201ENST00000298281 ESYT1Q9BSJ8 1104 aa13.44□□□□□ -0.26
PCF11-201ENST00000298281 SOS1Q07889 1333 aaPredicted RBP13.44□□□□□ -0.26
PCF11-201ENST00000298281 ABCC5O15440 1437 aa13.44□□□□□ -0.26
PCF11-201ENST00000298281 TRPC3Q13507 836 aa13.44□□□□□ -0.26
PCF11-201ENST00000298281 RILPL1Q5EBL4 403 aa13.44□□□□□ -0.26
PCF11-201ENST00000298281 C20orf194Q5TEA3 1177 aa13.44□□□□□ -0.26
PCF11-201ENST00000298281 SDSP20132 328 aa13.43□□□□□ -0.26
PCF11-201ENST00000298281 CCDC122Q5T0U0 273 aa13.43□□□□□ -0.26
PCF11-201ENST00000298281 TPTE2Q6XPS3 522 aa13.43□□□□□ -0.26
PCF11-201ENST00000298281 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.43□□□□□ -0.26
PCF11-201ENST00000298281 RTL1A6NKG5 1358 aa13.43□□□□□ -0.26
PCF11-201ENST00000298281 ATP5DP30049 168 aa13.43□□□□□ -0.26
PCF11-201ENST00000298281 PDE1AP54750 535 aa13.43□□□□□ -0.26
PCF11-201ENST00000298281 ANKRD44Q8N8A2 993 aa13.43□□□□□ -0.26
PCF11-201ENST00000298281 IQUBQ8NA54 791 aa13.43□□□□□ -0.26
PCF11-201ENST00000298281 TRIM56Q9BRZ2 755 aaKnown RBP13.43□□□□□ -0.26
PCF11-201ENST00000298281 ANKRD2Q9GZV1 360 aa13.43□□□□□ -0.26
PCF11-201ENST00000298281 IDI1Q13907 227 aa13.43□□□□□ -0.26
PCF11-201ENST00000298281 EYA3Q99504 573 aa13.43□□□□□ -0.26
PCF11-201ENST00000298281 NKIRAS1Q9NYS0 192 aa13.43□□□□□ -0.26
PCF11-201ENST00000298281 POLD1P28340 1107 aa13.43□□□□□ -0.26
PCF11-201ENST00000298281 GLT8D2Q9H1C3 349 aa13.43□□□□□ -0.26
PCF11-201ENST00000298281 CDK13Q14004 1512 aaKnown RBP13.43□□□□□ -0.26
PCF11-201ENST00000298281 HP1BP3Q5SSJ5 553 aaPredicted RBP13.43□□□□□ -0.26
PCF11-201ENST00000298281 LARP6Q9BRS8 491 aaKnown RBP13.43□□□□□ -0.26
PCF11-201ENST00000298281 C14orf93Q9H972 538 aaKnown RBP13.43□□□□□ -0.26
PCF11-201ENST00000298281 HGSO14964 777 aaPredicted RBP13.43□□□□□ -0.26
PCF11-201ENST00000298281 TTC31Q49AM3 519 aaPredicted RBP13.43□□□□□ -0.26
PCF11-201ENST00000298281 SEL1L2Q5TEA6 688 aa13.43□□□□□ -0.26
PCF11-201ENST00000298281 Q6ZUG5 572 aa13.43□□□□□ -0.26
PCF11-201ENST00000298281 NOP14P78316 857 aaKnown RBP13.42□□□□□ -0.26
PCF11-201ENST00000298281 BIRC3Q13489 604 aa13.42□□□□□ -0.26
PCF11-201ENST00000298281 VWA3BQ502W6 1294 aa13.42□□□□□ -0.26
PCF11-201ENST00000298281 SPDYE1Q8NFV5 336 aaPredicted RBP13.42□□□□□ -0.26
PCF11-201ENST00000298281 RILPQ96NA2 401 aa13.42□□□□□ -0.26
PCF11-201ENST00000298281 PICK1Q9NRD5 415 aa13.42□□□□□ -0.26
PCF11-201ENST00000298281 PAG1Q9NWQ8 432 aa13.42□□□□□ -0.26
PCF11-201ENST00000298281 FNDC3AQ9Y2H6 1198 aaKnown RBP13.42□□□□□ -0.26
PCF11-201ENST00000298281 CHMP2AO43633 222 aa13.42□□□□□ -0.26
PCF11-201ENST00000298281 NXNQ6DKJ4 435 aa13.42□□□□□ -0.26
PCF11-201ENST00000298281 CNGA4Q8IV77 575 aa13.42□□□□□ -0.26
PCF11-201ENST00000298281 LEO1Q8WVC0 666 aaPredicted RBP13.42□□□□□ -0.26
PCF11-201ENST00000298281 STK24Q9Y6E0 443 aa13.42□□□□□ -0.26
PCF11-201ENST00000298281 TNNI2P48788 182 aa13.42□□□□□ -0.26
PCF11-201ENST00000298281 PHEXP78562 749 aa13.42□□□□□ -0.26
PCF11-201ENST00000298281 AKAP4Q5JQC9 854 aa13.42□□□□□ -0.26
PCF11-201ENST00000298281 POMGNT1Q8WZA1 660 aa13.42□□□□□ -0.26
PCF11-201ENST00000298281 ACEP12821 1306 aa13.42□□□□□ -0.26
PCF11-201ENST00000298281 EBAG9O00559 213 aa13.42□□□□□ -0.26
PCF11-201ENST00000298281 CERS3Q8IU89 383 aa13.42□□□□□ -0.26
PCF11-201ENST00000298281 HMGXB3Q12766 1538 aa13.42□□□□□ -0.26
PCF11-201ENST00000298281 ATP8B2P98198 1209 aa13.42□□□□□ -0.26
PCF11-201ENST00000298281 ITKQ08881 620 aa13.42□□□□□ -0.26
PCF11-201ENST00000298281 XAGE3Q8WTP9 111 aa13.42□□□□□ -0.26
PCF11-201ENST00000298281 KRT33BQ14525 404 aa13.42□□□□□ -0.26
PCF11-201ENST00000298281 SNX21Q969T3 373 aa13.42□□□□□ -0.26
PCF11-201ENST00000298281 KIF9Q9HAQ2 790 aa13.41□□□□□ -0.26
PCF11-201ENST00000298281 F13A1P00488 732 aa13.41□□□□□ -0.26
PCF11-201ENST00000298281 ATP6V1AP38606 617 aa13.41□□□□□ -0.26
PCF11-201ENST00000298281 COG7P83436 770 aa13.41□□□□□ -0.26
PCF11-201ENST00000298281 LINS1Q8NG48 757 aa13.41□□□□□ -0.26
PCF11-201ENST00000298281 VCX3AQ9NNX9 186 aa13.41□□□□□ -0.26
PCF11-201ENST00000298281 GSTA1P08263 222 aa13.41□□□□□ -0.26
PCF11-201ENST00000298281 GSTA2P09210 222 aa13.41□□□□□ -0.26
PCF11-201ENST00000298281 CASP2P42575 452 aa13.41□□□□□ -0.26
PCF11-201ENST00000298281 NOLC1Q14978 699 aaKnown RBP eCLIP13.41□□□□□ -0.261e-11■□□□□ 9.8
PCF11-201ENST00000298281 DACT1Q9NYF0 836 aa13.41□□□□□ -0.26
PCF11-201ENST00000298281 RAD50Q92878 1312 aa13.41□□□□□ -0.26
PCF11-201ENST00000298281 FAM180AQ6UWF9 173 aa13.41□□□□□ -0.26
PCF11-201ENST00000298281 COPS6Q7L5N1 327 aa13.41□□□□□ -0.26
PCF11-201ENST00000298281 AOPEPQ8N6M6 819 aa13.41□□□□□ -0.26
PCF11-201ENST00000298281 JDP2Q8WYK2 163 aa13.41□□□□□ -0.26
PCF11-201ENST00000298281 MCUR1Q96AQ8 359 aa13.41□□□□□ -0.26
PCF11-201ENST00000298281 CARD10Q9BWT7 1032 aa13.41□□□□□ -0.26
PCF11-201ENST00000298281 CHPF2Q9P2E5 772 aa13.41□□□□□ -0.26
PCF11-201ENST00000298281 DKC1O60832 514 aaKnown RBP eCLIP13.41□□□□□ -0.26
PCF11-201ENST00000298281 ZRANB2O95218 330 aaKnown RBP eCLIP13.41□□□□□ -0.261e-6■■□□□ 12.4
PCF11-201ENST00000298281 BLVRAP53004 296 aa13.41□□□□□ -0.26
PCF11-201ENST00000298281 HS1BP3Q53T59 392 aa13.41□□□□□ -0.26
PCF11-201ENST00000298281 MIER3Q7Z3K6 550 aa13.41□□□□□ -0.26
PCF11-201ENST00000298281 CCDC26Q8TAB7 109 aa13.41□□□□□ -0.26
PCF11-201ENST00000298281 NUCKS1Q9H1E3 243 aaKnown RBP13.41□□□□□ -0.26
PCF11-201ENST00000298281 DENND4BO75064 1496 aaPredicted RBP13.4□□□□□ -0.26
PCF11-201ENST00000298281 TBCCQ15814 346 aa13.4□□□□□ -0.26
PCF11-201ENST00000298281 DHX58Q96C10 678 aa13.4□□□□□ -0.26
PCF11-201ENST00000298281 PKD2L1Q9P0L9 805 aa13.4□□□□□ -0.26
PCF11-201ENST00000298281 A6NNZ2 444 aa13.4□□□□□ -0.26
PCF11-201ENST00000298281 TUBB8Q3ZCM7 444 aa13.4□□□□□ -0.26
PCF11-201ENST00000298281 LMBR1LQ6UX01 489 aa13.4□□□□□ -0.26
PCF11-201ENST00000298281 GBP6Q6ZN66 633 aa13.4□□□□□ -0.26
PCF11-201ENST00000298281 CDAN1Q8IWY9 1227 aa13.4□□□□□ -0.26
PCF11-201ENST00000298281 PNMA2Q9UL42 364 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms