RNA–Protein interactions for RNA: ENST00000277575.5

USP6NL-201, Transcript of USP6 N-terminal like, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USP6NL, Length 4,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-201ENST00000277575 TTC38Q5R3I4 469 aa12.73□□□□□ -0.37
USP6NL-201ENST00000277575 CCDC65Q8IXS2 484 aa12.73□□□□□ -0.37
USP6NL-201ENST00000277575 TMEM87AQ8NBN3 555 aa12.73□□□□□ -0.37
USP6NL-201ENST00000277575 FLAD1Q8NFF5 587 aa12.73□□□□□ -0.37
USP6NL-201ENST00000277575 DRC1Q96MC2 740 aa12.73□□□□□ -0.37
USP6NL-201ENST00000277575 PLVAPQ9BX97 442 aa12.73□□□□□ -0.37
USP6NL-201ENST00000277575 CGNQ9P2M7 1197 aaKnown RBP12.73□□□□□ -0.37
USP6NL-201ENST00000277575 DLGAP5Q15398 846 aa12.72□□□□□ -0.37
USP6NL-201ENST00000277575 LEO1Q8WVC0 666 aaPredicted RBP12.72□□□□□ -0.37
USP6NL-201ENST00000277575 PREX2Q70Z35 1606 aa12.72□□□□□ -0.37
USP6NL-201ENST00000277575 CCDC175P0C221 793 aa12.72□□□□□ -0.37
USP6NL-201ENST00000277575 TXKP42681 527 aa12.72□□□□□ -0.37
USP6NL-201ENST00000277575 PPARAQ07869 468 aa12.72□□□□□ -0.37
USP6NL-201ENST00000277575 FAM47AQ5JRC9 791 aa12.72□□□□□ -0.37
USP6NL-201ENST00000277575 VTI1AQ96AJ9 217 aa12.72□□□□□ -0.37
USP6NL-201ENST00000277575 PRIMPOLQ96LW4 560 aa12.72□□□□□ -0.37
USP6NL-201ENST00000277575 SYNCQ9H7C4 482 aa12.72□□□□□ -0.37
USP6NL-201ENST00000277575 RNF216Q9NWF9 866 aaPredicted RBP12.72□□□□□ -0.37
USP6NL-201ENST00000277575 ZNF521Q96K83 1311 aa12.72□□□□□ -0.37
USP6NL-201ENST00000277575 hCG_1642624A0A1W2PR95 340 aa12.72□□□□□ -0.37
USP6NL-201ENST00000277575 PRAMEF22A3QJZ6 481 aa12.72□□□□□ -0.37
USP6NL-201ENST00000277575 CCT6AP40227 531 aaKnown RBP12.72□□□□□ -0.37
USP6NL-201ENST00000277575 KIF5AQ12840 1032 aa12.72□□□□□ -0.37
USP6NL-201ENST00000277575 MSL1Q68DK7 614 aa12.72□□□□□ -0.37
USP6NL-201ENST00000277575 NEK11Q8NG66 645 aa12.72□□□□□ -0.37
USP6NL-201ENST00000277575 TRPC5Q9UL62 973 aaPredicted RBP12.72□□□□□ -0.37
USP6NL-201ENST00000277575 LUC7L2Q9Y383 392 aaKnown RBP12.72□□□□□ -0.37
USP6NL-201ENST00000277575 MRVI1Q9Y6F6 885 aa12.72□□□□□ -0.37
USP6NL-201ENST00000277575 POLR2DO15514 142 aaKnown RBP12.72□□□□□ -0.37
USP6NL-201ENST00000277575 RRP9O43818 475 aaKnown RBP12.72□□□□□ -0.37
USP6NL-201ENST00000277575 HSPD1P10809 573 aaKnown RBP12.72□□□□□ -0.37
USP6NL-201ENST00000277575 RPL13P26373 211 aaKnown RBP12.72□□□□□ -0.37
USP6NL-201ENST00000277575 NONOQ15233 471 aaKnown RBP eCLIP12.72□□□□□ -0.37
USP6NL-201ENST00000277575 PUS3Q9BZE2 481 aaKnown RBP12.72□□□□□ -0.37
USP6NL-201ENST00000277575 HECW2Q9P2P5 1572 aa12.71□□□□□ -0.37
USP6NL-201ENST00000277575 TRAF5O00463 557 aa12.71□□□□□ -0.37
USP6NL-201ENST00000277575 CUTAO60888 179 aa12.71□□□□□ -0.37
USP6NL-201ENST00000277575 TACC1O75410 805 aa12.71□□□□□ -0.37
USP6NL-201ENST00000277575 ZNF853P0CG23 659 aa12.71□□□□□ -0.37
USP6NL-201ENST00000277575 CHRNDQ07001 517 aa12.71□□□□□ -0.37
USP6NL-201ENST00000277575 NIM1KQ8IY84 436 aa12.71□□□□□ -0.37
USP6NL-201ENST00000277575 TEKT1Q969V4 418 aa12.71□□□□□ -0.37
USP6NL-201ENST00000277575 USP40Q9NVE5 1235 aa12.71□□□□□ -0.37
USP6NL-201ENST00000277575 ARPP21Q9UBL0 812 aaPredicted RBP12.71□□□□□ -0.37
USP6NL-201ENST00000277575 KCNJ14Q9UNX9 436 aa12.71□□□□□ -0.37
USP6NL-201ENST00000277575 ZCCHC11Q5TAX3 1644 aaKnown RBP12.71□□□□□ -0.37
USP6NL-201ENST00000277575 ACTN2P35609 894 aa12.71□□□□□ -0.37
USP6NL-201ENST00000277575 KRT83P78385 493 aa12.71□□□□□ -0.37
USP6NL-201ENST00000277575 ME3Q16798 604 aa12.71□□□□□ -0.37
USP6NL-201ENST00000277575 IFNL3Q8IZI9 196 aa12.71□□□□□ -0.37
USP6NL-201ENST00000277575 ZNF654Q8IZM8 581 aa12.71□□□□□ -0.37
USP6NL-201ENST00000277575 CCNT1O60563 726 aaKnown RBP12.71□□□□□ -0.38
USP6NL-201ENST00000277575 ARID4AP29374 1257 aaPredicted RBP12.71□□□□□ -0.38
USP6NL-201ENST00000277575 KIAA0753Q2KHM9 967 aa12.71□□□□□ -0.38
USP6NL-201ENST00000277575 CDC37L1Q7L3B6 337 aa12.71□□□□□ -0.38
USP6NL-201ENST00000277575 CPXCR1Q8N123 301 aa12.71□□□□□ -0.38
USP6NL-201ENST00000277575 LZTS2Q9BRK4 669 aa12.71□□□□□ -0.38
USP6NL-201ENST00000277575 QTRT2Q9H974 415 aaKnown RBP12.71□□□□□ -0.38
USP6NL-201ENST00000277575 DBNLQ9UJU6 430 aaKnown RBP12.71□□□□□ -0.38
USP6NL-201ENST00000277575 ERCC6L2Q5T890 1561 aa12.71□□□□□ -0.38
USP6NL-201ENST00000277575 TSPOAP1O95153 1857 aa12.71□□□□□ -0.38
USP6NL-201ENST00000277575 KDM5CP41229 1560 aa12.71□□□□□ -0.38
USP6NL-201ENST00000277575 ATP2B4P23634 1241 aa12.7□□□□□ -0.38
USP6NL-201ENST00000277575 PHKA1P46020 1223 aa12.7□□□□□ -0.38
USP6NL-201ENST00000277575 KRT25Q7Z3Z0 450 aa12.7□□□□□ -0.38
USP6NL-201ENST00000277575 NLGN1Q8N2Q7 840 aa12.7□□□□□ -0.38
USP6NL-201ENST00000277575 TMOD4Q9NZQ9 345 aa12.7□□□□□ -0.38
USP6NL-201ENST00000277575 BCCIPQ9P287 314 aaKnown RBP eCLIP12.7□□□□□ -0.38
USP6NL-201ENST00000277575 PALD1Q9ULE6 856 aa12.7□□□□□ -0.38
USP6NL-201ENST00000277575 KRT86O43790 486 aa12.7□□□□□ -0.38
USP6NL-201ENST00000277575 FGAP02671 866 aa12.7□□□□□ -0.38
USP6NL-201ENST00000277575 PDE4DQ08499 809 aa12.7□□□□□ -0.38
USP6NL-201ENST00000277575 SDR42E1Q8WUS8 393 aa12.7□□□□□ -0.38
USP6NL-201ENST00000277575 PPP1R2P41236 205 aa12.7□□□□□ -0.38
USP6NL-201ENST00000277575 NCBP1Q09161 790 aaKnown RBP12.7□□□□□ -0.38
USP6NL-201ENST00000277575 HAUS3Q68CZ6 603 aa12.7□□□□□ -0.38
USP6NL-201ENST00000277575 GTF3C6Q969F1 213 aa12.7□□□□□ -0.38
USP6NL-201ENST00000277575 FAM212AQ96EL1 285 aa12.7□□□□□ -0.38
USP6NL-201ENST00000277575 ZNF335Q9H4Z2 1342 aaPredicted RBP12.7□□□□□ -0.38
USP6NL-201ENST00000277575 CHMP2AO43633 222 aa12.7□□□□□ -0.38
USP6NL-201ENST00000277575 CKAP4Q07065 602 aaKnown RBP12.7□□□□□ -0.38
USP6NL-201ENST00000277575 UBE4AQ14139 1066 aa12.7□□□□□ -0.38
USP6NL-201ENST00000277575 VPS54Q9P1Q0 977 aa12.7□□□□□ -0.38
USP6NL-201ENST00000277575 STAP2Q9UGK3 403 aa12.7□□□□□ -0.38
USP6NL-201ENST00000277575 GOLGA6L10A0A0M3HER8 536 aa12.69□□□□□ -0.38
USP6NL-201ENST00000277575 CTAGE15A4D2H0 777 aa12.69□□□□□ -0.38
USP6NL-201ENST00000277575 SYNMO15061 1565 aa12.69□□□□□ -0.38
USP6NL-201ENST00000277575 CTAGE8P0CG41 777 aa12.69□□□□□ -0.38
USP6NL-201ENST00000277575 ADCY7P51828 1080 aa12.69□□□□□ -0.38
USP6NL-201ENST00000277575 CTAGE6Q86UF2 777 aa12.69□□□□□ -0.38
USP6NL-201ENST00000277575 CTAGE4Q8IX94 777 aa12.69□□□□□ -0.38
USP6NL-201ENST00000277575 LRWD1Q9UFC0 647 aa12.69□□□□□ -0.38
USP6NL-201ENST00000277575 ANKARQ7Z5J8 1434 aa12.69□□□□□ -0.38
USP6NL-201ENST00000277575 POLR3GO15318 223 aaPredicted RBP12.69□□□□□ -0.38
USP6NL-201ENST00000277575 ZNF274Q96GC6 653 aaPredicted RBP12.69□□□□□ -0.38
USP6NL-201ENST00000277575 MAPK8IP1Q9UQF2 711 aa12.69□□□□□ -0.38
USP6NL-201ENST00000277575 CLASP1Q7Z460 1538 aa12.69□□□□□ -0.38
USP6NL-201ENST00000277575 ERICH4A6NGS2 130 aa12.69□□□□□ -0.38
USP6NL-201ENST00000277575 ZNF202O95125 648 aa12.69□□□□□ -0.38
USP6NL-201ENST00000277575 FAM182BQ5T319 152 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 84.3 ms