RNA–Protein interactions for RNA: ENST00000263966.7

USP13-201, Transcript of ubiquitin specific peptidase 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP13, Length 8,323 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP13-201ENST00000263966 PARD3BQ8TEW8 1205 aa18.37■□□□□ 0.53
USP13-201ENST00000263966 TTC1Q99614 292 aa18.37■□□□□ 0.53
USP13-201ENST00000263966 BAG5Q9UL15 447 aa18.37■□□□□ 0.53
USP13-201ENST00000263966 TMOD1P28289 359 aa18.37■□□□□ 0.53
USP13-201ENST00000263966 PLCD1P51178 756 aa18.37■□□□□ 0.53
USP13-201ENST00000263966 YARSP54577 528 aaKnown RBP18.37■□□□□ 0.53
USP13-201ENST00000263966 GNPTABQ3T906 1256 aa18.37■□□□□ 0.53
USP13-201ENST00000263966 DCAF15Q66K64 600 aa18.37■□□□□ 0.53
USP13-201ENST00000263966 ARFGAP2Q8N6H7 521 aa18.37■□□□□ 0.53
USP13-201ENST00000263966 ARHGAP24Q8N264 748 aa18.37■□□□□ 0.53
USP13-201ENST00000263966 CLSTN2Q9H4D0 955 aa18.37■□□□□ 0.53
USP13-201ENST00000263966 PCDH11XQ9BZA7 1347 aa18.37■□□□□ 0.53
USP13-201ENST00000263966 PCDH11YQ9BZA8 1340 aa18.37■□□□□ 0.53
USP13-201ENST00000263966 ESPNB1AK53 854 aa18.37■□□□□ 0.53
USP13-201ENST00000263966 PPFIA3O75145 1194 aa18.37■□□□□ 0.53
USP13-201ENST00000263966 UFL1O94874 794 aa18.37■□□□□ 0.53
USP13-201ENST00000263966 GKAP1Q5VSY0 366 aaPredicted RBP18.37■□□□□ 0.53
USP13-201ENST00000263966 ZNF365Q70YC5 407 aa18.37■□□□□ 0.53
USP13-201ENST00000263966 NEDD9Q14511 834 aa18.36■□□□□ 0.53
USP13-201ENST00000263966 CCDC170Q8IYT3 715 aa18.36■□□□□ 0.53
USP13-201ENST00000263966 UBLCP1Q8WVY7 318 aaPredicted RBP18.36■□□□□ 0.53
USP13-201ENST00000263966 ADPGKQ9BRR6 497 aa18.36■□□□□ 0.53
USP13-201ENST00000263966 TFIP11Q9UBB9 837 aaKnown RBP18.36■□□□□ 0.53
USP13-201ENST00000263966 TRPC6Q9Y210 931 aa18.36■□□□□ 0.53
USP13-201ENST00000263966 HMGB3O15347 200 aaKnown RBP18.36■□□□□ 0.53
USP13-201ENST00000263966 TUBB4AP04350 444 aa18.36■□□□□ 0.53
USP13-201ENST00000263966 SMIM23A6NLE4 172 aa18.36■□□□□ 0.53
USP13-201ENST00000263966 IQUBQ8NA54 791 aa18.36■□□□□ 0.53
USP13-201ENST00000263966 IRX5P78411 483 aaPredicted RBP18.36■□□□□ 0.53
USP13-201ENST00000263966 TMTC4Q5T4D3 741 aa18.36■□□□□ 0.53
USP13-201ENST00000263966 RPS6KC1Q96S38 1066 aa18.36■□□□□ 0.53
USP13-201ENST00000263966 ANAPC5Q9UJX4 755 aa18.36■□□□□ 0.53
USP13-201ENST00000263966 TNFAIP3P21580 790 aa18.36■□□□□ 0.53
USP13-201ENST00000263966 ZBTB33Q86T24 672 aa18.36■□□□□ 0.53
USP13-201ENST00000263966 CHMP2AO43633 222 aa18.35■□□□□ 0.53
USP13-201ENST00000263966 NFKBIAP25963 317 aa18.35■□□□□ 0.53
USP13-201ENST00000263966 IPO4Q8TEX9 1081 aaKnown RBP18.35■□□□□ 0.53
USP13-201ENST00000263966 VCX3AQ9NNX9 186 aa18.35■□□□□ 0.53
USP13-201ENST00000263966 NUCB1Q02818 461 aa18.35■□□□□ 0.53
USP13-201ENST00000263966 SRRTQ9BXP5 876 aaKnown RBP18.35■□□□□ 0.53
USP13-201ENST00000263966 TUBBP07437 444 aa18.35■□□□□ 0.53
USP13-201ENST00000263966 PPP4R1Q8TF05 950 aa18.35■□□□□ 0.53
USP13-201ENST00000263966 DHX58Q96C10 678 aa18.35■□□□□ 0.53
USP13-201ENST00000263966 HEXIM1O94992 359 aaKnown RBP18.35■□□□□ 0.53
USP13-201ENST00000263966 SULF1Q8IWU6 871 aa18.35■□□□□ 0.53
USP13-201ENST00000263966 IWS1Q96ST2 819 aa18.35■□□□□ 0.53
USP13-201ENST00000263966 PRR16Q569H4 304 aa18.35■□□□□ 0.53
USP13-201ENST00000263966 DENND4BO75064 1496 aaPredicted RBP18.34■□□□□ 0.53
USP13-201ENST00000263966 TRIM50Q86XT4 487 aa18.34■□□□□ 0.53
USP13-201ENST00000263966 LZTS2Q9BRK4 669 aa18.34■□□□□ 0.53
USP13-201ENST00000263966 NME9Q86XW9 330 aa18.34■□□□□ 0.53
USP13-201ENST00000263966 CCNL1Q9UK58 526 aaPredicted RBP18.34■□□□□ 0.53
USP13-201ENST00000263966 DNMBPQ6XZF7 1577 aa18.34■□□□□ 0.53
USP13-201ENST00000263966 GPCPD1Q9NPB8 672 aa18.34■□□□□ 0.53
USP13-201ENST00000263966 RRP9O43818 475 aaKnown RBP18.34■□□□□ 0.53
USP13-201ENST00000263966 S100BP04271 92 aaPredicted RBP18.34■□□□□ 0.53
USP13-201ENST00000263966 ZSWIM4Q9H7M6 989 aa18.34■□□□□ 0.53
USP13-201ENST00000263966 ADCY5O95622 1261 aa18.34■□□□□ 0.53
USP13-201ENST00000263966 INPP1P49441 399 aa18.34■□□□□ 0.53
USP13-201ENST00000263966 NLRX1Q86UT6 975 aa18.34■□□□□ 0.53
USP13-201ENST00000263966 RTL1A6NKG5 1358 aa18.34■□□□□ 0.53
USP13-201ENST00000263966 TRAF5O00463 557 aa18.33■□□□□ 0.53
USP13-201ENST00000263966 DNAJC21Q5F1R6 531 aaKnown RBP18.33■□□□□ 0.53
USP13-201ENST00000263966 GLG1Q92896 1179 aa18.33■□□□□ 0.53
USP13-201ENST00000263966 TNRQ92752 1358 aa18.33■□□□□ 0.53
USP13-201ENST00000263966 IRS4O14654 1257 aaPredicted RBP18.33■□□□□ 0.53
USP13-201ENST00000263966 GBP1P32455 592 aa18.33■□□□□ 0.53
USP13-201ENST00000263966 FCHSD1Q86WN1 690 aa18.33■□□□□ 0.53
USP13-201ENST00000263966 KIF9Q9HAQ2 790 aa18.33■□□□□ 0.53
USP13-201ENST00000263966 PTPREP23469 700 aa18.33■□□□□ 0.52
USP13-201ENST00000263966 KRT81Q14533 505 aa18.33■□□□□ 0.52
USP13-201ENST00000263966 MRPS27Q92552 414 aaKnown RBP18.33■□□□□ 0.52
USP13-201ENST00000263966 LRFN2Q9ULH4 789 aa18.33■□□□□ 0.52
USP13-201ENST00000263966 PSMD6Q15008 389 aa18.33■□□□□ 0.52
USP13-201ENST00000263966 GBP6Q6ZN66 633 aa18.33■□□□□ 0.52
USP13-201ENST00000263966 TTLL7Q6ZT98 887 aa18.33■□□□□ 0.52
USP13-201ENST00000263966 CROCCP2Q86T23 111 aa18.33■□□□□ 0.52
USP13-201ENST00000263966 RNF169Q8NCN4 708 aa18.33■□□□□ 0.52
USP13-201ENST00000263966 IFT81Q8WYA0 676 aa18.33■□□□□ 0.52
USP13-201ENST00000263966 THUMPD2Q9BTF0 503 aaKnown RBP18.33■□□□□ 0.52
USP13-201ENST00000263966 RBBP5Q15291 538 aaKnown RBP18.32■□□□□ 0.52
USP13-201ENST00000263966 PHLDB2Q86SQ0 1253 aa18.32■□□□□ 0.52
USP13-201ENST00000263966 XAGE3Q8WTP9 111 aa18.32■□□□□ 0.52
USP13-201ENST00000263966 SPDYE2BA6NHP3 402 aa18.32■□□□□ 0.52
USP13-201ENST00000263966 SPDYE6P0CI01 402 aa18.32■□□□□ 0.52
USP13-201ENST00000263966 NUCKS1Q9H1E3 243 aaKnown RBP18.32■□□□□ 0.52
USP13-201ENST00000263966 SLC1A4P43007 532 aa18.32■□□□□ 0.52
USP13-201ENST00000263966 DACT3Q96B18 629 aaPredicted RBP18.32■□□□□ 0.52
USP13-201ENST00000263966 CHMP6Q96FZ7 201 aa18.32■□□□□ 0.52
USP13-201ENST00000263966 CHPF2Q9P2E5 772 aa18.32■□□□□ 0.52
USP13-201ENST00000263966 LUC7L2Q9Y383 392 aaKnown RBP18.32■□□□□ 0.52
USP13-201ENST00000263966 ARHGEF37A1IGU5 675 aa18.32■□□□□ 0.52
USP13-201ENST00000263966 LMNB1P20700 586 aa18.32■□□□□ 0.52
USP13-201ENST00000263966 KRT33BQ14525 404 aa18.32■□□□□ 0.52
USP13-201ENST00000263966 ARHGEF16Q5VV41 709 aa18.32■□□□□ 0.52
USP13-201ENST00000263966 FLAD1Q8NFF5 587 aa18.32■□□□□ 0.52
USP13-201ENST00000263966 GPATCH11Q8N954 259 aa18.32■□□□□ 0.52
USP13-201ENST00000263966 MCF2L2Q86YR7 1114 aa18.32■□□□□ 0.52
USP13-201ENST00000263966 SSH1Q8WYL5 1049 aa18.32■□□□□ 0.52
USP13-201ENST00000263966 IGF1RP08069 1367 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms