RNA–Protein interactions for RNA: ENST00000228916.6

SCNN1A-201, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCNN1A, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-201ENST00000228916 NT5DC1Q5TFE4 455 aa16.02■□□□□ 0.15
SCNN1A-201ENST00000228916 SRGAP1Q7Z6B7 1085 aa16.02■□□□□ 0.15
SCNN1A-201ENST00000228916 CCDC191Q8NCU4 936 aa16.02■□□□□ 0.15
SCNN1A-201ENST00000228916 IPO4Q8TEX9 1081 aaKnown RBP16.02■□□□□ 0.15
SCNN1A-201ENST00000228916 CCDC12Q8WUD4 166 aaPredicted RBP16.02■□□□□ 0.15
SCNN1A-201ENST00000228916 MRPL44Q9H9J2 332 aaKnown RBP16.02■□□□□ 0.15
SCNN1A-201ENST00000228916 CWC15Q9P013 229 aaKnown RBP16.02■□□□□ 0.15
SCNN1A-201ENST00000228916 MAN1B1Q9UKM7 699 aa16.02■□□□□ 0.15
SCNN1A-201ENST00000228916 NFE2L3Q9Y4A8 694 aa16.02■□□□□ 0.15
SCNN1A-201ENST00000228916 GYS2P54840 703 aa16.01■□□□□ 0.15
SCNN1A-201ENST00000228916 FMR1Q06787 632 aaKnown RBP eCLIP16.01■□□□□ 0.15
SCNN1A-201ENST00000228916 WASHC4Q2M389 1173 aa16.01■□□□□ 0.15
SCNN1A-201ENST00000228916 TTLL7Q6ZT98 887 aa16.01■□□□□ 0.15
SCNN1A-201ENST00000228916 DESI2Q9BSY9 194 aa16.01■□□□□ 0.15
SCNN1A-201ENST00000228916 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.01■□□□□ 0.15
SCNN1A-201ENST00000228916 TJP1Q07157 1748 aa16.01■□□□□ 0.15
SCNN1A-201ENST00000228916 FOXN1O15353 648 aa16.01■□□□□ 0.15
SCNN1A-201ENST00000228916 CDKL5O76039 1030 aa16.01■□□□□ 0.15
SCNN1A-201ENST00000228916 USP5P45974 858 aa16.01■□□□□ 0.15
SCNN1A-201ENST00000228916 FKBP4Q02790 459 aaKnown RBP eCLIP16.01■□□□□ 0.15
SCNN1A-201ENST00000228916 MLKLQ8NB16 471 aa16.01■□□□□ 0.15
SCNN1A-201ENST00000228916 APPBP2Q92624 585 aa16.01■□□□□ 0.15
SCNN1A-201ENST00000228916 PUS3Q9BZE2 481 aaKnown RBP16.01■□□□□ 0.15
SCNN1A-201ENST00000228916 ZNF213O14771 459 aa16.01■□□□□ 0.15
SCNN1A-201ENST00000228916 CHMP4BP1P59074 171 aa16.01■□□□□ 0.15
SCNN1A-201ENST00000228916 KARSQ15046 597 aaKnown RBP16.01■□□□□ 0.15
SCNN1A-201ENST00000228916 HSP90AA4PQ58FG1 418 aa16.01■□□□□ 0.15
SCNN1A-201ENST00000228916 BEND6Q5SZJ8 279 aaPredicted RBP16.01■□□□□ 0.15
SCNN1A-201ENST00000228916 ANKZF1Q9H8Y5 726 aa16.01■□□□□ 0.15
SCNN1A-201ENST00000228916 ATG3Q9NT62 314 aa16.01■□□□□ 0.15
SCNN1A-201ENST00000228916 RAB21Q9UL25 225 aa16.01■□□□□ 0.15
SCNN1A-201ENST00000228916 ANGEL1Q9UNK9 670 aaKnown RBP16.01■□□□□ 0.15
SCNN1A-201ENST00000228916 CCDC175P0C221 793 aa16■□□□□ 0.15
SCNN1A-201ENST00000228916 SARSP49591 514 aaKnown RBP16■□□□□ 0.15
SCNN1A-201ENST00000228916 RAI14Q9P0K7 980 aa16■□□□□ 0.15
SCNN1A-201ENST00000228916 ECM29Q5VYK3 1845 aa16■□□□□ 0.15
SCNN1A-201ENST00000228916 MYO1CO00159 1063 aa16■□□□□ 0.15
SCNN1A-201ENST00000228916 LMAN1P49257 510 aa16■□□□□ 0.15
SCNN1A-201ENST00000228916 METAP2P50579 478 aaKnown RBP eCLIP16■□□□□ 0.15
SCNN1A-201ENST00000228916 NR1I3Q14994 352 aa16■□□□□ 0.15
SCNN1A-201ENST00000228916 PANX2Q96RD6 677 aa16■□□□□ 0.15
SCNN1A-201ENST00000228916 PUS7LQ9H0K6 701 aaKnown RBP16■□□□□ 0.15
SCNN1A-201ENST00000228916 RASSF4Q9H2L5 321 aa16■□□□□ 0.15
SCNN1A-201ENST00000228916 HOOK1Q9UJC3 728 aaKnown RBP16■□□□□ 0.15
SCNN1A-201ENST00000228916 LAMB4A4D0S4 1761 aa16■□□□□ 0.15
SCNN1A-201ENST00000228916 ACTN2P35609 894 aa15.99■□□□□ 0.15
SCNN1A-201ENST00000228916 TTC39AQ5SRH9 613 aa15.99■□□□□ 0.15
SCNN1A-201ENST00000228916 NUTM2AQ8IVF1 878 aaPredicted RBP15.99■□□□□ 0.15
SCNN1A-201ENST00000228916 KRI1Q8N9T8 703 aaKnown RBP15.99■□□□□ 0.15
SCNN1A-201ENST00000228916 MSANTD4Q8NCY6 345 aa15.99■□□□□ 0.15
SCNN1A-201ENST00000228916 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.99■□□□□ 0.15
SCNN1A-201ENST00000228916 IRX2Q9BZI1 471 aaPredicted RBP15.99■□□□□ 0.15
SCNN1A-201ENST00000228916 NBPF3Q9H094 633 aa15.99■□□□□ 0.15
SCNN1A-201ENST00000228916 CWC25Q9NXE8 425 aaPredicted RBP15.99■□□□□ 0.15
SCNN1A-201ENST00000228916 DACH1Q9UI36 760 aa15.99■□□□□ 0.15
SCNN1A-201ENST00000228916 ALS2Q96Q42 1657 aa15.99■□□□□ 0.15
SCNN1A-201ENST00000228916 CABP4P57796 275 aa15.99■□□□□ 0.15
SCNN1A-201ENST00000228916 MORC3Q14149 939 aa15.99■□□□□ 0.15
SCNN1A-201ENST00000228916 MTF1Q14872 753 aa15.99■□□□□ 0.15
SCNN1A-201ENST00000228916 POSTNQ15063 836 aa15.99■□□□□ 0.15
SCNN1A-201ENST00000228916 MED15Q96RN5 788 aa15.99■□□□□ 0.15
SCNN1A-201ENST00000228916 LCMT1Q9UIC8 334 aa15.99■□□□□ 0.15
SCNN1A-201ENST00000228916 POTEB2H3BUK9 544 aa15.99■□□□□ 0.15
SCNN1A-201ENST00000228916 SH2B2O14492 632 aaPredicted RBP15.99■□□□□ 0.15
SCNN1A-201ENST00000228916 CDC23Q9UJX2 597 aa15.99■□□□□ 0.15
SCNN1A-201ENST00000228916 ADGRG1Q9Y653 693 aa15.99■□□□□ 0.15
SCNN1A-201ENST00000228916 NUP188Q5SRE5 1749 aa15.98■□□□□ 0.15
SCNN1A-201ENST00000228916 A0A1B0GTH6 734 aa15.98■□□□□ 0.15
SCNN1A-201ENST00000228916 CSB-PGBD3P0DP91 1061 aa15.98■□□□□ 0.15
SCNN1A-201ENST00000228916 NTRK3Q16288 839 aa15.98■□□□□ 0.15
SCNN1A-201ENST00000228916 HSP90AB3PQ58FF7 597 aa15.98■□□□□ 0.15
SCNN1A-201ENST00000228916 CPLX2Q6PUV4 134 aaKnown RBP15.98■□□□□ 0.15
SCNN1A-201ENST00000228916 APOA5Q6Q788 366 aa15.98■□□□□ 0.15
SCNN1A-201ENST00000228916 SRLQ86TD4 932 aa15.98■□□□□ 0.15
SCNN1A-201ENST00000228916 CEP112Q8N8E3 955 aa15.98■□□□□ 0.15
SCNN1A-201ENST00000228916 DDX17Q92841 729 aaKnown RBP15.98■□□□□ 0.15
SCNN1A-201ENST00000228916 AKR1B15C9JRZ8 316 aaPredicted RBP15.98■□□□□ 0.15
SCNN1A-201ENST00000228916 GPAA1O43292 621 aa15.98■□□□□ 0.15
SCNN1A-201ENST00000228916 HDXQ7Z353 690 aa15.98■□□□□ 0.15
SCNN1A-201ENST00000228916 STK11IPQ8N1F8 1099 aa15.98■□□□□ 0.15
SCNN1A-201ENST00000228916 TRIML1Q8N9V2 468 aa15.98■□□□□ 0.15
SCNN1A-201ENST00000228916 PHKBQ93100 1093 aa15.98■□□□□ 0.15
SCNN1A-201ENST00000228916 TEX13AQ9BXU3 409 aaPredicted RBP15.98■□□□□ 0.15
SCNN1A-201ENST00000228916 SOWAHDA6NJG2 315 aa15.97■□□□□ 0.15
SCNN1A-201ENST00000228916 TUBB2AQ13885 445 aa15.97■□□□□ 0.15
SCNN1A-201ENST00000228916 CYB5R4Q7L1T6 521 aa15.97■□□□□ 0.15
SCNN1A-201ENST00000228916 NKX2-3Q8TAU0 364 aa15.97■□□□□ 0.15
SCNN1A-201ENST00000228916 TUBB2BQ9BVA1 445 aa15.97■□□□□ 0.15
SCNN1A-201ENST00000228916 PDE11AQ9HCR9 933 aa15.97■□□□□ 0.15
SCNN1A-201ENST00000228916 CEP126Q9P2H0 1117 aa15.97■□□□□ 0.15
SCNN1A-201ENST00000228916 DENND2AQ9ULE3 1009 aa15.97■□□□□ 0.15
SCNN1A-201ENST00000228916 L1RE1Q9UN81 338 aa15.97■□□□□ 0.15
SCNN1A-201ENST00000228916 COL18A1P39060 1754 aa15.97■□□□□ 0.15
SCNN1A-201ENST00000228916 ABCC12Q96J65 1359 aa15.97■□□□□ 0.15
SCNN1A-201ENST00000228916 PRR29P0C7W0 189 aa15.97■□□□□ 0.15
SCNN1A-201ENST00000228916 ADORA1P30542 326 aa15.97■□□□□ 0.15
SCNN1A-201ENST00000228916 TUBB4BP68371 445 aa15.97■□□□□ 0.15
SCNN1A-201ENST00000228916 TRMT44Q8IYL2 757 aaKnown RBP15.97■□□□□ 0.15
SCNN1A-201ENST00000228916 CABLES1Q8TDN4 633 aa15.97■□□□□ 0.15
SCNN1A-201ENST00000228916 NAA15Q9BXJ9 866 aaKnown RBP15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms