RNA–Protein interactions for RNA: ENST00000221922.10

CCDC9-201, Transcript of coiled-coil domain containing 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC9, Length 2,093 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-201ENST00000221922 A0A1W2PQ64 194 aa25.74■■□□□ 1.71
CCDC9-201ENST00000221922 A0A1W2PQD8 194 aa25.74■■□□□ 1.71
CCDC9-201ENST00000221922 CTIFO43310 598 aaKnown RBP25.74■■□□□ 1.71
CCDC9-201ENST00000221922 LIFRP42702 1097 aa25.74■■□□□ 1.71
CCDC9-201ENST00000221922 CAVIN4Q5BKX8 364 aa25.74■■□□□ 1.71
CCDC9-201ENST00000221922 ADALQ6DHV7 355 aa25.74■■□□□ 1.71
CCDC9-201ENST00000221922 RAB11FIP4Q86YS3 637 aa25.74■■□□□ 1.71
CCDC9-201ENST00000221922 FSIP1Q8NA03 581 aa25.74■■□□□ 1.71
CCDC9-201ENST00000221922 IGDCC4Q8TDY8 1250 aa25.74■■□□□ 1.71
CCDC9-201ENST00000221922 CACTINQ8WUQ7 758 aaKnown RBP25.74■■□□□ 1.71
CCDC9-201ENST00000221922 ANO10Q9NW15 660 aa25.74■■□□□ 1.71
CCDC9-201ENST00000221922 DENND2AQ9ULE3 1009 aa25.74■■□□□ 1.71
CCDC9-201ENST00000221922 COL1A1P02452 1464 aaPredicted RBP25.74■■□□□ 1.71
CCDC9-201ENST00000221922 ZBTB43O43298 467 aa25.73■■□□□ 1.71
CCDC9-201ENST00000221922 GYG1P46976 350 aa25.73■■□□□ 1.71
CCDC9-201ENST00000221922 STK38Q15208 465 aa25.73■■□□□ 1.71
CCDC9-201ENST00000221922 CCDC144BQ3MJ40 725 aa25.73■■□□□ 1.71
CCDC9-201ENST00000221922 OTUD7BQ6GQQ9 843 aa25.73■■□□□ 1.71
CCDC9-201ENST00000221922 CCDC144CPQ8IYA2 1237 aa25.73■■□□□ 1.71
CCDC9-201ENST00000221922 MRPS27Q92552 414 aaKnown RBP25.73■■□□□ 1.71
CCDC9-201ENST00000221922 ZMYND15Q9H091 742 aa25.73■■□□□ 1.71
CCDC9-201ENST00000221922 RPS8P62241 208 aaKnown RBP25.73■■□□□ 1.71
CCDC9-201ENST00000221922 TMEM67Q5HYA8 995 aa25.73■■□□□ 1.71
CCDC9-201ENST00000221922 MYSM1Q5VVJ2 828 aa25.73■■□□□ 1.71
CCDC9-201ENST00000221922 FMR1NBQ8N0W7 255 aaPredicted RBP25.73■■□□□ 1.71
CCDC9-201ENST00000221922 LCORLQ8N3X6 602 aa25.73■■□□□ 1.71
CCDC9-201ENST00000221922 LINC00301Q8NCQ3 95 aa25.73■■□□□ 1.71
CCDC9-201ENST00000221922 PCDHA7Q9UN72 937 aa25.73■■□□□ 1.71
CCDC9-201ENST00000221922 SF3A1Q15459 793 aaKnown RBP25.72■■□□□ 1.71
CCDC9-201ENST00000221922 AKNAD1Q5T1N1 836 aa25.72■■□□□ 1.71
CCDC9-201ENST00000221922 SYNE3Q6ZMZ3 975 aa25.72■■□□□ 1.71
CCDC9-201ENST00000221922 NFXL1Q6ZNB6 911 aa25.72■■□□□ 1.71
CCDC9-201ENST00000221922 DHX40Q8IX18 779 aaKnown RBP25.72■■□□□ 1.71
CCDC9-201ENST00000221922 LY9Q9HBG7 655 aa25.72■■□□□ 1.71
CCDC9-201ENST00000221922 AFF2P51816 1311 aa25.72■■□□□ 1.71
CCDC9-201ENST00000221922 KIF23Q02241 960 aaPredicted RBP25.72■■□□□ 1.71
CCDC9-201ENST00000221922 AMIGO3Q86WK7 504 aa25.72■■□□□ 1.71
CCDC9-201ENST00000221922 CACNA1SQ13698 1873 aa25.71■■□□□ 1.71
CCDC9-201ENST00000221922 ECM29Q5VYK3 1845 aa25.71■■□□□ 1.71
CCDC9-201ENST00000221922 SEMA3EO15041 775 aa25.71■■□□□ 1.71
CCDC9-201ENST00000221922 NEMFO60524 1076 aa25.71■■□□□ 1.71
CCDC9-201ENST00000221922 MFSD6Q6ZSS7 791 aa25.71■■□□□ 1.71
CCDC9-201ENST00000221922 ALG1Q9BT22 464 aa25.71■■□□□ 1.71
CCDC9-201ENST00000221922 SLC4A4Q9Y6R1 1079 aa25.71■■□□□ 1.71
CCDC9-201ENST00000221922 POLR3DP05423 398 aaPredicted RBP25.7■■□□□ 1.71
CCDC9-201ENST00000221922 TDO2P48775 406 aa25.7■■□□□ 1.71
CCDC9-201ENST00000221922 NKX2-3Q8TAU0 364 aa25.7■■□□□ 1.71
CCDC9-201ENST00000221922 STAG1Q8WVM7 1258 aa25.7■■□□□ 1.71
CCDC9-201ENST00000221922 FAM84BQ96KN1 310 aaPredicted RBP25.7■■□□□ 1.71
CCDC9-201ENST00000221922 MTA3Q9BTC8 594 aa25.7■■□□□ 1.71
CCDC9-201ENST00000221922 ANKRD2Q9GZV1 360 aa25.7■■□□□ 1.71
CCDC9-201ENST00000221922 IQSEC3Q9UPP2 1182 aaPredicted RBP25.7■■□□□ 1.71
CCDC9-201ENST00000221922 PDS5AQ29RF7 1337 aaKnown RBP25.7■■□□□ 1.71
CCDC9-201ENST00000221922 GOLGA8AA7E2F4 631 aa25.7■■□□□ 1.7
CCDC9-201ENST00000221922 CYP7A1P22680 504 aa25.7■■□□□ 1.7
CCDC9-201ENST00000221922 MICU3Q86XE3 530 aa25.7■■□□□ 1.7
CCDC9-201ENST00000221922 LRRC8AQ8IWT6 810 aa25.7■■□□□ 1.7
CCDC9-201ENST00000221922 TNRC6CQ9HCJ0 1690 aaKnown RBP25.69■■□□□ 1.7
CCDC9-201ENST00000221922 IFIT3O14879 490 aaKnown RBP25.69■■□□□ 1.7
CCDC9-201ENST00000221922 CTDSPL2Q05D32 466 aa25.69■■□□□ 1.7
CCDC9-201ENST00000221922 FBXO33Q7Z6M2 555 aa25.69■■□□□ 1.7
CCDC9-201ENST00000221922 VPS37DQ86XT2 251 aa25.69■■□□□ 1.7
CCDC9-201ENST00000221922 ZSWIM5Q9P217 1185 aa25.69■■□□□ 1.7
CCDC9-201ENST00000221922 MYH13Q9UKX3 1938 aa25.69■■□□□ 1.7
CCDC9-201ENST00000221922 NID2Q14112 1375 aa25.69■■□□□ 1.7
CCDC9-201ENST00000221922 STK36Q9NRP7 1315 aa25.68■■□□□ 1.7
CCDC9-201ENST00000221922 CCDC69A6NI79 296 aa25.68■■□□□ 1.7
CCDC9-201ENST00000221922 WTIPA6NIX2 430 aaPredicted RBP25.68■■□□□ 1.7
CCDC9-201ENST00000221922 BECN2A8MW95 431 aa25.68■■□□□ 1.7
CCDC9-201ENST00000221922 SPTLC2O15270 562 aa25.68■■□□□ 1.7
CCDC9-201ENST00000221922 PRKAB2O43741 272 aa25.68■■□□□ 1.7
CCDC9-201ENST00000221922 SART3Q15020 963 aaKnown RBP25.68■■□□□ 1.7
CCDC9-201ENST00000221922 CEP57L1Q8IYX8 460 aa25.68■■□□□ 1.7
CCDC9-201ENST00000221922 RNF41Q9H4P4 317 aaPredicted RBP25.68■■□□□ 1.7
CCDC9-201ENST00000221922 TRPC5Q9UL62 973 aaPredicted RBP25.68■■□□□ 1.7
CCDC9-201ENST00000221922 SLC12A7Q9Y666 1083 aa25.68■■□□□ 1.7
CCDC9-201ENST00000221922 CLIC4Q9Y696 253 aa25.68■■□□□ 1.7
CCDC9-201ENST00000221922 RBM6P78332 1123 aaKnown RBP25.68■■□□□ 1.7
CCDC9-201ENST00000221922 TRAPPC3LQ5T215 181 aa25.68■■□□□ 1.7
CCDC9-201ENST00000221922 ANKRD7Q92527 254 aa25.68■■□□□ 1.7
CCDC9-201ENST00000221922 ABCF2Q9UG63 623 aa25.68■■□□□ 1.7
CCDC9-201ENST00000221922 CDC27P30260 824 aa25.67■■□□□ 1.7
CCDC9-201ENST00000221922 RFC4P35249 363 aa25.67■■□□□ 1.7
CCDC9-201ENST00000221922 IARSP41252 1262 aaKnown RBP25.67■■□□□ 1.7
CCDC9-201ENST00000221922 ANO1Q5XXA6 986 aa25.67■■□□□ 1.7
CCDC9-201ENST00000221922 NAT10Q9H0A0 1025 aaKnown RBP25.67■■□□□ 1.7
CCDC9-201ENST00000221922 RAI14Q9P0K7 980 aa25.67■■□□□ 1.7
CCDC9-201ENST00000221922 SMTNL1A8MU46 457 aa25.67■■□□□ 1.7
CCDC9-201ENST00000221922 KIF28PB7ZC32 967 aa25.67■■□□□ 1.7
CCDC9-201ENST00000221922 ZBTB22O15209 634 aa25.67■■□□□ 1.7
CCDC9-201ENST00000221922 ADGRA1Q86SQ6 560 aa25.67■■□□□ 1.7
CCDC9-201ENST00000221922 SEPT12Q8IYM1 358 aa25.67■■□□□ 1.7
CCDC9-201ENST00000221922 MIGA1Q8NAN2 632 aa25.67■■□□□ 1.7
CCDC9-201ENST00000221922 C16orf45Q96MC5 204 aaPredicted RBP25.67■■□□□ 1.7
CCDC9-201ENST00000221922 BCL11BQ9C0K0 894 aaPredicted RBP25.67■■□□□ 1.7
CCDC9-201ENST00000221922 SENP2Q9HC62 589 aa25.67■■□□□ 1.7
CCDC9-201ENST00000221922 TM4SF1P30408 202 aa25.66■■□□□ 1.7
CCDC9-201ENST00000221922 HSPA1LP34931 641 aa25.66■■□□□ 1.7
CCDC9-201ENST00000221922 TRIM29Q14134 588 aa25.66■■□□□ 1.7
CCDC9-201ENST00000221922 NTRK3Q16288 839 aa25.66■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms