RNA–Protein interactions for RNA: ENST00000220478.7

SCG3-201, Transcript of secretogranin III, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCG3, Length 3,315 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3-201ENST00000220478 H3BQV1 296 aa9.05□□□□□ -0.96
SCG3-201ENST00000220478 AGPSO00116 658 aa9.05□□□□□ -0.96
SCG3-201ENST00000220478 ADKP55263 362 aaKnown RBP9.05□□□□□ -0.96
SCG3-201ENST00000220478 GUCY1B3Q02153 619 aa9.05□□□□□ -0.96
SCG3-201ENST00000220478 TAF7Q15545 349 aaPredicted RBP9.05□□□□□ -0.96
SCG3-201ENST00000220478 DNAJC21Q5F1R6 531 aaKnown RBP9.05□□□□□ -0.96
SCG3-201ENST00000220478 IFFO2Q5TF58 517 aa9.05□□□□□ -0.96
SCG3-201ENST00000220478 JAKMIP3Q5VZ66 844 aa9.05□□□□□ -0.96
SCG3-201ENST00000220478 AACSQ86V21 672 aa9.05□□□□□ -0.96
SCG3-201ENST00000220478 FANCLQ9NW38 375 aa9.05□□□□□ -0.96
SCG3-201ENST00000220478 PFKFB1P16118 471 aa9.05□□□□□ -0.96
SCG3-201ENST00000220478 FBXO31Q5XUX0 539 aaPredicted RBP9.05□□□□□ -0.96
SCG3-201ENST00000220478 RAD9BQ6WBX8 426 aa9.05□□□□□ -0.96
SCG3-201ENST00000220478 NOA1Q8NC60 698 aaKnown RBP9.05□□□□□ -0.96
SCG3-201ENST00000220478 FAM71BQ8TC56 605 aa9.05□□□□□ -0.96
SCG3-201ENST00000220478 CALR3Q96L12 384 aaKnown RBP9.05□□□□□ -0.96
SCG3-201ENST00000220478 BAG1Q99933 345 aaPredicted RBP9.05□□□□□ -0.96
SCG3-201ENST00000220478 GJB4Q9NTQ9 266 aa9.05□□□□□ -0.96
SCG3-201ENST00000220478 CDHR2Q9BYE9 1310 aa9.05□□□□□ -0.96
SCG3-201ENST00000220478 PI4KAP2A4QPH2 592 aa9.05□□□□□ -0.96
SCG3-201ENST00000220478 STX10O60499 249 aa9.05□□□□□ -0.96
SCG3-201ENST00000220478 HNRNPH1P31943 449 aaKnown RBP9.05□□□□□ -0.96
SCG3-201ENST00000220478 KARSQ15046 597 aaKnown RBP9.05□□□□□ -0.96
SCG3-201ENST00000220478 OTUD7BQ6GQQ9 843 aa9.05□□□□□ -0.96
SCG3-201ENST00000220478 CLASRPQ8N2M8 674 aaKnown RBP9.05□□□□□ -0.96
SCG3-201ENST00000220478 LARGE2Q8N3Y3 721 aa9.05□□□□□ -0.96
SCG3-201ENST00000220478 PI4KAP1Q8N8J0 262 aa9.05□□□□□ -0.96
SCG3-201ENST00000220478 CCDC8Q9H0W5 538 aaPredicted RBP9.05□□□□□ -0.96
SCG3-201ENST00000220478 EHD4Q9H223 541 aa9.05□□□□□ -0.96
SCG3-201ENST00000220478 POLR3EQ9NVU0 708 aa9.05□□□□□ -0.96
SCG3-201ENST00000220478 NDUFB9Q9Y6M9 179 aa9.05□□□□□ -0.96
SCG3-201ENST00000220478 SOWAHDA6NJG2 315 aa9.04□□□□□ -0.96
SCG3-201ENST00000220478 ZSCAN12O43309 604 aa9.04□□□□□ -0.96
SCG3-201ENST00000220478 APLP1P51693 650 aa9.04□□□□□ -0.96
SCG3-201ENST00000220478 MDM2Q00987 491 aaPredicted RBP9.04□□□□□ -0.96
SCG3-201ENST00000220478 AMPD2Q01433 879 aa9.04□□□□□ -0.96
SCG3-201ENST00000220478 GNL2Q13823 731 aaKnown RBP9.04□□□□□ -0.96
SCG3-201ENST00000220478 METTL16Q86W50 562 aaKnown RBP9.04□□□□□ -0.96
SCG3-201ENST00000220478 GOLGA6L1Q8N7Z2 621 aa9.04□□□□□ -0.96
SCG3-201ENST00000220478 CARD10Q9BWT7 1032 aa9.04□□□□□ -0.96
SCG3-201ENST00000220478 BOLA2Q9H3K6 86 aa9.04□□□□□ -0.96
SCG3-201ENST00000220478 METTL14Q9HCE5 456 aaKnown RBP9.04□□□□□ -0.96
SCG3-201ENST00000220478 GOPCQ9HD26 462 aa9.04□□□□□ -0.96
SCG3-201ENST00000220478 PUF60Q9UHX1 559 aaKnown RBP9.04□□□□□ -0.96
SCG3-201ENST00000220478 USTQ9Y2C2 406 aa9.04□□□□□ -0.96
SCG3-201ENST00000220478 CCDC61Q9Y6R9 512 aa9.04□□□□□ -0.96
SCG3-201ENST00000220478 ANKARQ7Z5J8 1434 aa9.04□□□□□ -0.96
SCG3-201ENST00000220478 LAMB4A4D0S4 1761 aa9.04□□□□□ -0.96
SCG3-201ENST00000220478 C5P01031 1676 aa9.04□□□□□ -0.96
SCG3-201ENST00000220478 KAT6BQ8WYB5 2073 aa9.04□□□□□ -0.96
SCG3-201ENST00000220478 FAM237AA0A1B0GTK4 181 aa9.04□□□□□ -0.96
SCG3-201ENST00000220478 PHACTR2O75167 634 aa9.04□□□□□ -0.96
SCG3-201ENST00000220478 FNTAP49354 379 aa9.04□□□□□ -0.96
SCG3-201ENST00000220478 FMR1Q06787 632 aaKnown RBP eCLIP9.04□□□□□ -0.96
SCG3-201ENST00000220478 FBXW10Q5XX13 1052 aa9.04□□□□□ -0.96
SCG3-201ENST00000220478 GIPC2Q8TF65 315 aa9.04□□□□□ -0.96
SCG3-201ENST00000220478 CHPF2Q9P2E5 772 aa9.04□□□□□ -0.96
SCG3-201ENST00000220478 SLIT1O75093 1534 aa9.03□□□□□ -0.96
SCG3-201ENST00000220478 A0A087WUV0 522 aaPredicted RBP9.03□□□□□ -0.96
SCG3-201ENST00000220478 SLC3A2P08195 630 aaKnown RBP9.03□□□□□ -0.96
SCG3-201ENST00000220478 PNOCQ13519 176 aa9.03□□□□□ -0.96
SCG3-201ENST00000220478 DHX8Q14562 1220 aaKnown RBP9.03□□□□□ -0.96
SCG3-201ENST00000220478 NOM1Q5C9Z4 860 aaKnown RBP9.03□□□□□ -0.96
SCG3-201ENST00000220478 SHC4Q6S5L8 630 aa9.03□□□□□ -0.96
SCG3-201ENST00000220478 DNAAF4Q8WXU2 420 aa9.03□□□□□ -0.96
SCG3-201ENST00000220478 RIN2Q8WYP3 895 aaPredicted RBP9.03□□□□□ -0.96
SCG3-201ENST00000220478 SDF4Q9BRK5 362 aa9.03□□□□□ -0.96
SCG3-201ENST00000220478 CDC23Q9UJX2 597 aa9.03□□□□□ -0.96
SCG3-201ENST00000220478 HMGB1P1B2RPK0 211 aaPredicted RBP9.03□□□□□ -0.96
SCG3-201ENST00000220478 RNF40O75150 1001 aa9.03□□□□□ -0.96
SCG3-201ENST00000220478 ANXA1P04083 346 aa9.03□□□□□ -0.96
SCG3-201ENST00000220478 PDIA3P30101 505 aaKnown RBP9.03□□□□□ -0.96
SCG3-201ENST00000220478 CCT2P78371 535 aaKnown RBP9.03□□□□□ -0.96
SCG3-201ENST00000220478 SUFUQ9UMX1 484 aa9.03□□□□□ -0.96
SCG3-201ENST00000220478 ADGRG1Q9Y653 693 aa9.03□□□□□ -0.96
SCG3-201ENST00000220478 UTYO14607 1347 aa9.03□□□□□ -0.96
SCG3-201ENST00000220478 FOXN1O15353 648 aa9.03□□□□□ -0.96
SCG3-201ENST00000220478 MYL5Q02045 173 aa9.03□□□□□ -0.96
SCG3-201ENST00000220478 HDGFL1Q5TGJ6 251 aa9.03□□□□□ -0.96
SCG3-201ENST00000220478 WDR93Q6P2C0 686 aa9.03□□□□□ -0.96
SCG3-201ENST00000220478 CCDC12Q8WUD4 166 aaPredicted RBP9.03□□□□□ -0.96
SCG3-201ENST00000220478 PCMTD1Q96MG8 357 aaPredicted RBP9.03□□□□□ -0.96
SCG3-201ENST00000220478 C19orf44Q9H6X5 657 aa9.03□□□□□ -0.96
SCG3-201ENST00000220478 MED4Q9NPJ6 270 aa9.03□□□□□ -0.96
SCG3-201ENST00000220478 SEC31BQ9NQW1 1179 aa9.03□□□□□ -0.96
SCG3-201ENST00000220478 HPCAL4Q9UM19 191 aa9.03□□□□□ -0.96
SCG3-201ENST00000220478 BCL9LQ86UU0 1499 aa9.03□□□□□ -0.96
SCG3-201ENST00000220478 MYH13Q9UKX3 1938 aa9.02□□□□□ -0.96
SCG3-201ENST00000220478 LTN1O94822 1766 aa9.02□□□□□ -0.96
SCG3-201ENST00000220478 HIP1O00291 1037 aa9.02□□□□□ -0.97
SCG3-201ENST00000220478 KCNQ3O43525 872 aa9.02□□□□□ -0.97
SCG3-201ENST00000220478 CSB-PGBD3P0DP91 1061 aa9.02□□□□□ -0.97
SCG3-201ENST00000220478 PBX1P40424 430 aa9.02□□□□□ -0.97
SCG3-201ENST00000220478 SF3A1Q15459 793 aaKnown RBP9.02□□□□□ -0.97
SCG3-201ENST00000220478 CLEC4GQ6UXB4 293 aa9.02□□□□□ -0.97
SCG3-201ENST00000220478 GPHNQ9NQX3 736 aaPredicted RBP9.02□□□□□ -0.97
SCG3-201ENST00000220478 hCG_2014768A0A024R1R8 64 aa9.02□□□□□ -0.97
SCG3-201ENST00000220478 ABCB7O75027 752 aa9.02□□□□□ -0.97
SCG3-201ENST00000220478 YEATS4O95619 227 aa9.02□□□□□ -0.97
SCG3-201ENST00000220478 TOP1P11387 765 aaKnown RBP9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms