RNA–Protein interactions for RNA: ENST00000219281.7

USB1-201, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USB1, Length 2,282 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-201ENST00000219281 CDHR2Q9BYE9 1310 aa19.92■□□□□ 0.78
USB1-201ENST00000219281 ZBTB43O43298 467 aa19.91■□□□□ 0.78
USB1-201ENST00000219281 SERPINC1P01008 464 aa19.91■□□□□ 0.78
USB1-201ENST00000219281 KCNJ6P48051 423 aa19.91■□□□□ 0.78
USB1-201ENST00000219281 UBASH3AP57075 661 aa19.91■□□□□ 0.78
USB1-201ENST00000219281 DZIP3Q86Y13 1208 aaKnown RBP19.91■□□□□ 0.78
USB1-201ENST00000219281 SPATA31A5Q5VU36 1347 aa19.91■□□□□ 0.78
USB1-201ENST00000219281 SPATA31A7Q8IWB4 1347 aa19.91■□□□□ 0.78
USB1-201ENST00000219281 UBE2Q2LH0YL09 131 aa19.91■□□□□ 0.78
USB1-201ENST00000219281 RANBP6O60518 1105 aaKnown RBP19.91■□□□□ 0.78
USB1-201ENST00000219281 IARSP41252 1262 aaKnown RBP19.91■□□□□ 0.78
USB1-201ENST00000219281 MYL5Q02045 173 aa19.91■□□□□ 0.78
USB1-201ENST00000219281 UBE3CQ15386 1083 aa19.91■□□□□ 0.78
USB1-201ENST00000219281 RESP18Q5W5W9 173 aa19.91■□□□□ 0.78
USB1-201ENST00000219281 INTS5Q6P9B9 1019 aaKnown RBP19.91■□□□□ 0.78
USB1-201ENST00000219281 IGDCC4Q8TDY8 1250 aa19.91■□□□□ 0.78
USB1-201ENST00000219281 L2HGDHQ9H9P8 463 aa19.91■□□□□ 0.78
USB1-201ENST00000219281 ANKRD18BA2A2Z9 1011 aa19.9■□□□□ 0.78
USB1-201ENST00000219281 GOLGA8AA7E2F4 631 aa19.9■□□□□ 0.78
USB1-201ENST00000219281 ERVV-1B6SEH8 477 aa19.9■□□□□ 0.78
USB1-201ENST00000219281 PIP4K2BP78356 416 aa19.9■□□□□ 0.78
USB1-201ENST00000219281 TRIM29Q14134 588 aa19.9■□□□□ 0.78
USB1-201ENST00000219281 NTRK3Q16288 839 aa19.9■□□□□ 0.78
USB1-201ENST00000219281 ZNF512BQ96KM6 892 aaPredicted RBP19.9■□□□□ 0.78
USB1-201ENST00000219281 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.9■□□□□ 0.78
USB1-201ENST00000219281 WWC3Q9ULE0 1092 aa19.9■□□□□ 0.78
USB1-201ENST00000219281 WNK3Q9BYP7 1800 aa19.9■□□□□ 0.78
USB1-201ENST00000219281 PDE6AP16499 860 aa19.9■□□□□ 0.78
USB1-201ENST00000219281 EIF5P55010 431 aaKnown RBP19.9■□□□□ 0.78
USB1-201ENST00000219281 LONRF3Q496Y0 759 aa19.9■□□□□ 0.78
USB1-201ENST00000219281 TMEM87BQ96K49 555 aa19.9■□□□□ 0.78
USB1-201ENST00000219281 LY9Q9HBG7 655 aa19.9■□□□□ 0.78
USB1-201ENST00000219281 FAM217BQ9NTX9 383 aaPredicted RBP19.9■□□□□ 0.78
USB1-201ENST00000219281 UBN2Q6ZU65 1347 aa19.89■□□□□ 0.78
USB1-201ENST00000219281 PHLPP1O60346 1717 aa19.89■□□□□ 0.77
USB1-201ENST00000219281 FAM237AA0A1B0GTK4 181 aa19.89■□□□□ 0.77
USB1-201ENST00000219281 CBFA2T2O43439 604 aa19.89■□□□□ 0.77
USB1-201ENST00000219281 PHKA1P46020 1223 aa19.89■□□□□ 0.77
USB1-201ENST00000219281 CTSWP56202 376 aa19.89■□□□□ 0.77
USB1-201ENST00000219281 CFAP100Q494V2 611 aa19.89■□□□□ 0.77
USB1-201ENST00000219281 TMEM67Q5HYA8 995 aa19.89■□□□□ 0.77
USB1-201ENST00000219281 METTL16Q86W50 562 aaKnown RBP19.89■□□□□ 0.77
USB1-201ENST00000219281 HOMER1Q86YM7 354 aa19.89■□□□□ 0.77
USB1-201ENST00000219281 VGLL2Q8N8G2 317 aa19.89■□□□□ 0.77
USB1-201ENST00000219281 LRRN4CLQ8ND94 238 aa19.89■□□□□ 0.77
USB1-201ENST00000219281 TRMT112Q9UI30 125 aaKnown RBP19.89■□□□□ 0.77
USB1-201ENST00000219281 NRAPQ86VF7 1730 aa19.89■□□□□ 0.77
USB1-201ENST00000219281 IRS4O14654 1257 aaPredicted RBP19.88■□□□□ 0.77
USB1-201ENST00000219281 CUTAO60888 179 aa19.88■□□□□ 0.77
USB1-201ENST00000219281 PTPN21Q16825 1174 aa19.88■□□□□ 0.77
USB1-201ENST00000219281 CCDC93Q567U6 631 aa19.88■□□□□ 0.77
USB1-201ENST00000219281 CCDC102BQ68D86 513 aa19.88■□□□□ 0.77
USB1-201ENST00000219281 OLFM4Q6UX06 510 aa19.88■□□□□ 0.77
USB1-201ENST00000219281 ZNF34Q8IZ26 560 aa19.88■□□□□ 0.77
USB1-201ENST00000219281 AIDAQ96BJ3 306 aa19.88■□□□□ 0.77
USB1-201ENST00000219281 SLC26A6Q9BXS9 759 aa19.88■□□□□ 0.77
USB1-201ENST00000219281 DOT1LQ8TEK3 1739 aa19.88■□□□□ 0.77
USB1-201ENST00000219281 ATRNO75882 1429 aa19.88■□□□□ 0.77
USB1-201ENST00000219281 A0A0G2JS52 829 aa19.88■□□□□ 0.77
USB1-201ENST00000219281 KIF20AO95235 890 aa19.88■□□□□ 0.77
USB1-201ENST00000219281 ERCC6LQ2NKX8 1250 aa19.88■□□□□ 0.77
USB1-201ENST00000219281 KRBA2Q6ZNG9 492 aa19.88■□□□□ 0.77
USB1-201ENST00000219281 FOXP4Q8IVH2 680 aaPredicted RBP19.88■□□□□ 0.77
USB1-201ENST00000219281 CNNM3Q8NE01 707 aa19.88■□□□□ 0.77
USB1-201ENST00000219281 STRBPQ96SI9 672 aaKnown RBP19.88■□□□□ 0.77
USB1-201ENST00000219281 MYH7P12883 1935 aa19.88■□□□□ 0.77
USB1-201ENST00000219281 TCRBV5S4A2TA0A5A2 114 aa19.87■□□□□ 0.77
USB1-201ENST00000219281 PDE8BO95263 885 aa19.87■□□□□ 0.77
USB1-201ENST00000219281 GOLGA8FQ08AF8 430 aa19.87■□□□□ 0.77
USB1-201ENST00000219281 GOLGA8DPQ0D2H9 430 aa19.87■□□□□ 0.77
USB1-201ENST00000219281 EIF4ENIF1Q9NRA8 985 aaKnown RBP19.87■□□□□ 0.77
USB1-201ENST00000219281 FANCLQ9NW38 375 aa19.87■□□□□ 0.77
USB1-201ENST00000219281 KCNH3Q9ULD8 1083 aa19.87■□□□□ 0.77
USB1-201ENST00000219281 PCDHA5Q9Y5H7 936 aa19.87■□□□□ 0.77
USB1-201ENST00000219281 TMEM232C9JQI7 657 aa19.87■□□□□ 0.77
USB1-201ENST00000219281 ATP6V1AP38606 617 aa19.87■□□□□ 0.77
USB1-201ENST00000219281 CTDSPL2Q05D32 466 aa19.87■□□□□ 0.77
USB1-201ENST00000219281 SSRP1Q08945 709 aaKnown RBP19.87■□□□□ 0.77
USB1-201ENST00000219281 SPECC1Q5M775 1068 aa19.87■□□□□ 0.77
USB1-201ENST00000219281 KRT222Q8N1A0 295 aa19.87■□□□□ 0.77
USB1-201ENST00000219281 AKAP11Q9UKA4 1901 aa19.87■□□□□ 0.77
USB1-201ENST00000219281 LOC102724428A0A0B4J2F2 783 aa19.86■□□□□ 0.77
USB1-201ENST00000219281 FOXN1O15353 648 aa19.86■□□□□ 0.77
USB1-201ENST00000219281 TUBB4AP04350 444 aa19.86■□□□□ 0.77
USB1-201ENST00000219281 SIK1P57059 783 aa19.86■□□□□ 0.77
USB1-201ENST00000219281 GABPB1Q06547 395 aaPredicted RBP19.86■□□□□ 0.77
USB1-201ENST00000219281 ITPK1Q13572 414 aa19.86■□□□□ 0.77
USB1-201ENST00000219281 BARGINQ6ZT62 677 aa19.86■□□□□ 0.77
USB1-201ENST00000219281 SGMS1Q86VZ5 419 aa19.86■□□□□ 0.77
USB1-201ENST00000219281 VSTM4Q8IW00 320 aa19.86■□□□□ 0.77
USB1-201ENST00000219281 DNAI1Q9UI46 699 aa19.86■□□□□ 0.77
USB1-201ENST00000219281 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP19.86■□□□□ 0.77
USB1-201ENST00000219281 SLC12A7Q9Y666 1083 aa19.86■□□□□ 0.77
USB1-201ENST00000219281 IFIT3O14879 490 aaKnown RBP19.86■□□□□ 0.77
USB1-201ENST00000219281 CRKLP46109 303 aaKnown RBP19.86■□□□□ 0.77
USB1-201ENST00000219281 UTP14AQ9BVJ6 771 aaKnown RBP19.86■□□□□ 0.77
USB1-201ENST00000219281 ZSWIM5Q9P217 1185 aa19.86■□□□□ 0.77
USB1-201ENST00000219281 NUP98P52948 1817 aa19.85■□□□□ 0.77
USB1-201ENST00000219281 CCP110O43303 1012 aa19.85■□□□□ 0.77
USB1-201ENST00000219281 KCNQ2O43526 872 aa19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms