RNA–Protein interactions for RNA: ENSMUST00000054384.5

Trim56-201, Transcript of E3 ubiquitin-protein ligase TRIM56, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim56, Length 9,279 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56-201ENSMUST00000054384 Arhgef2Q60875 985 aa13.27□□□□□ -0.29
Trim56-201ENSMUST00000054384 Zfp251Q6PCX8 632 aa13.27□□□□□ -0.29
Trim56-201ENSMUST00000054384 Cnga4Q3UW12 575 aa13.27□□□□□ -0.29
Trim56-201ENSMUST00000054384 Catsper2A2ARP9 588 aa13.27□□□□□ -0.29
Trim56-201ENSMUST00000054384 Rabgap1A2AWA9 1064 aa13.27□□□□□ -0.29
Trim56-201ENSMUST00000054384 Gm10110D3Z5M2 615 aa13.27□□□□□ -0.29
Trim56-201ENSMUST00000054384 Ncf2O70145 525 aa13.27□□□□□ -0.29
Trim56-201ENSMUST00000054384 Atp8b2P98199 1209 aa13.27□□□□□ -0.29
Trim56-201ENSMUST00000054384 Gngt1Q61012 74 aa13.27□□□□□ -0.29
Trim56-201ENSMUST00000054384 Med10Q9CXU0 135 aa13.27□□□□□ -0.29
Trim56-201ENSMUST00000054384 Satb1Q60611 764 aa13.26□□□□□ -0.29
Trim56-201ENSMUST00000054384 Kdm5aQ3UXZ9 1690 aa13.26□□□□□ -0.29
Trim56-201ENSMUST00000054384 WizO88286 1684 aaKnown RBP13.26□□□□□ -0.29
Trim56-201ENSMUST00000054384 Sem1P60897 70 aa13.26□□□□□ -0.29
Trim56-201ENSMUST00000054384 Pla2g4fQ50L41 855 aa13.26□□□□□ -0.29
Trim56-201ENSMUST00000054384 Ccdc189Q6NZQ0 333 aa13.26□□□□□ -0.29
Trim56-201ENSMUST00000054384 Tmx3Q8BXZ1 456 aa13.26□□□□□ -0.29
Trim56-201ENSMUST00000054384 Aox1O54754 1333 aa13.26□□□□□ -0.29
Trim56-201ENSMUST00000054384 ErmnQ5EBJ4 281 aa13.26□□□□□ -0.29
Trim56-201ENSMUST00000054384 Stac3Q8BZ71 360 aa13.26□□□□□ -0.29
Trim56-201ENSMUST00000054384 Nop2Q922K7 793 aaKnown RBP13.26□□□□□ -0.29
Trim56-201ENSMUST00000054384 Mast3Q3U214 1321 aa13.26□□□□□ -0.29
Trim56-201ENSMUST00000054384 Ccdc175E9PVB3 822 aa13.26□□□□□ -0.29
Trim56-201ENSMUST00000054384 Lrrc43Q3V0L5 667 aa13.26□□□□□ -0.29
Trim56-201ENSMUST00000054384 Ubn1Q4G0F8 1135 aa13.26□□□□□ -0.29
Trim56-201ENSMUST00000054384 Retreg2Q6NS82 541 aa13.26□□□□□ -0.29
Trim56-201ENSMUST00000054384 Parp10Q8CIE4 960 aa13.26□□□□□ -0.29
Trim56-201ENSMUST00000054384 Gtf3c5Q8R2T8 520 aa13.26□□□□□ -0.29
Trim56-201ENSMUST00000054384 Ms4a1P19437 291 aa13.26□□□□□ -0.29
Trim56-201ENSMUST00000054384 Ccnl1Q52KE7 532 aaKnown RBP13.26□□□□□ -0.29
Trim56-201ENSMUST00000054384 Fam135bQ9DAI6 1403 aa13.26□□□□□ -0.29
Trim56-201ENSMUST00000054384 Gimap5Q8BWF2 308 aa13.26□□□□□ -0.29
Trim56-201ENSMUST00000054384 Pdzrn3Q69ZS0 1063 aa13.26□□□□□ -0.29
Trim56-201ENSMUST00000054384 Stx17Q9D0I4 301 aa13.26□□□□□ -0.29
Trim56-201ENSMUST00000054384 Casp1P29452 402 aa13.25□□□□□ -0.29
Trim56-201ENSMUST00000054384 Rabep2Q91WG2 554 aa13.25□□□□□ -0.29
Trim56-201ENSMUST00000054384 Polr2dQ9D7M8 142 aaKnown RBP13.25□□□□□ -0.29
Trim56-201ENSMUST00000054384 Krt71Q9R0H5 524 aa13.25□□□□□ -0.29
Trim56-201ENSMUST00000054384 Tuft1O08970 390 aa13.25□□□□□ -0.29
Trim56-201ENSMUST00000054384 Mum1l1Q4VA55 681 aa13.25□□□□□ -0.29
Trim56-201ENSMUST00000054384 Sall3Q62255 1320 aa13.25□□□□□ -0.29
Trim56-201ENSMUST00000054384 Gm30191A0A0U1RNT7 187 aa13.25□□□□□ -0.29
Trim56-201ENSMUST00000054384 Igflr1Q3U4N7 345 aa13.25□□□□□ -0.29
Trim56-201ENSMUST00000054384 Cage1Q5IR70 849 aa13.25□□□□□ -0.29
Trim56-201ENSMUST00000054384 Mybpc2Q5XKE0 1136 aa13.25□□□□□ -0.29
Trim56-201ENSMUST00000054384 Kcnh3Q9WVJ0 1095 aa13.25□□□□□ -0.29
Trim56-201ENSMUST00000054384 Snapc4Q8BP86 1333 aa13.25□□□□□ -0.29
Trim56-201ENSMUST00000054384 Pdzd4Q9QY39 772 aa13.25□□□□□ -0.29
Trim56-201ENSMUST00000054384 Neo1P97798 1493 aa13.25□□□□□ -0.29
Trim56-201ENSMUST00000054384 Tmco4Q91WU4 631 aa13.25□□□□□ -0.29
Trim56-201ENSMUST00000054384 Trim7Q923T7 510 aa13.25□□□□□ -0.29
Trim56-201ENSMUST00000054384 Cnnm4Q69ZF7 771 aa13.25□□□□□ -0.29
Trim56-201ENSMUST00000054384 Kif1bpQ6ZPU9 617 aa13.25□□□□□ -0.29
Trim56-201ENSMUST00000054384 Mdm2P23804 489 aa13.25□□□□□ -0.29
Trim56-201ENSMUST00000054384 Ptpn14Q62130 1189 aa13.25□□□□□ -0.29
Trim56-201ENSMUST00000054384 Sh3tc1G3X9F6 1346 aa13.25□□□□□ -0.29
Trim56-201ENSMUST00000054384 Znf568E9PYI1 671 aa13.24□□□□□ -0.29
Trim56-201ENSMUST00000054384 Cct5P80316 541 aaKnown RBP13.24□□□□□ -0.29
Trim56-201ENSMUST00000054384 Nsun2Q1HFZ0 757 aaKnown RBP13.24□□□□□ -0.29
Trim56-201ENSMUST00000054384 Kif2bQ8C0N1 668 aa13.24□□□□□ -0.29
Trim56-201ENSMUST00000054384 Azi2Q9QYP6 405 aa13.24□□□□□ -0.29
Trim56-201ENSMUST00000054384 Apol7bB1AQP7 369 aa13.24□□□□□ -0.29
Trim56-201ENSMUST00000054384 Iws1Q8C1D8 766 aa13.24□□□□□ -0.29
Trim56-201ENSMUST00000054384 Mcm5P49718 733 aa13.24□□□□□ -0.29
Trim56-201ENSMUST00000054384 Rrp1P56183 494 aaKnown RBP13.24□□□□□ -0.29
Trim56-201ENSMUST00000054384 Ppp2r5cQ60996 524 aa13.24□□□□□ -0.29
Trim56-201ENSMUST00000054384 Stk38lQ7TSE6 464 aa13.24□□□□□ -0.29
Trim56-201ENSMUST00000054384 GancQ8BVW0 898 aa13.24□□□□□ -0.29
Trim56-201ENSMUST00000054384 Pde3aQ9Z0X4 1141 aa13.24□□□□□ -0.29
Trim56-201ENSMUST00000054384 Wdr70Q3TWF6 657 aa13.24□□□□□ -0.29
Trim56-201ENSMUST00000054384 Anks6Q6GQX6 883 aa13.24□□□□□ -0.29
Trim56-201ENSMUST00000054384 Dzip1Q8BMD2 852 aa13.24□□□□□ -0.29
Trim56-201ENSMUST00000054384 Pde5aQ8CG03 865 aa13.24□□□□□ -0.29
Trim56-201ENSMUST00000054384 RestQ8VIG1 1082 aa13.24□□□□□ -0.29
Trim56-201ENSMUST00000054384 Pik3c2gO70167 1506 aa13.24□□□□□ -0.29
Trim56-201ENSMUST00000054384 Hoxb7P09024 217 aa13.24□□□□□ -0.29
Trim56-201ENSMUST00000054384 HgsQ99LI8 775 aa13.24□□□□□ -0.29
Trim56-201ENSMUST00000054384 Cd2bp2Q9CWK3 342 aaKnown RBP13.24□□□□□ -0.29
Trim56-201ENSMUST00000054384 Cst12Q9DAN8 128 aa13.24□□□□□ -0.29
Trim56-201ENSMUST00000054384 Gdpd2Q9ESM6 539 aa13.24□□□□□ -0.29
Trim56-201ENSMUST00000054384 Ercc5P35689 1170 aa13.24□□□□□ -0.29
Trim56-201ENSMUST00000054384 Gm5168Q4KL04 211 aa13.24□□□□□ -0.29
Trim56-201ENSMUST00000054384 Fam228aQ8CDW1 299 aa13.24□□□□□ -0.29
Trim56-201ENSMUST00000054384 Sp4Q62445 782 aa13.24□□□□□ -0.29
Trim56-201ENSMUST00000054384 Tnpo2Q99LG2 887 aaKnown RBP13.24□□□□□ -0.29
Trim56-201ENSMUST00000054384 Nfil3O08750 462 aa13.24□□□□□ -0.29
Trim56-201ENSMUST00000054384 Ier5O89113 308 aa13.24□□□□□ -0.29
Trim56-201ENSMUST00000054384 Msl1Q6PDM1 616 aa13.24□□□□□ -0.29
Trim56-201ENSMUST00000054384 Tbc1d2B1AVH7 922 aa13.23□□□□□ -0.29
Trim56-201ENSMUST00000054384 Tdo2P48776 406 aa13.23□□□□□ -0.29
Trim56-201ENSMUST00000054384 Zfyve27Q3TXX3 415 aa13.23□□□□□ -0.29
Trim56-201ENSMUST00000054384 Fhdc1Q3ULZ2 1149 aa13.23□□□□□ -0.29
Trim56-201ENSMUST00000054384 Slc51bQ80WK2 128 aa13.23□□□□□ -0.29
Trim56-201ENSMUST00000054384 Myl7Q9QVP4 175 aa13.23□□□□□ -0.29
Trim56-201ENSMUST00000054384 Cnpy2Q9QXT0 182 aa13.23□□□□□ -0.29
Trim56-201ENSMUST00000054384 FanccP50652 591 aa13.23□□□□□ -0.29
Trim56-201ENSMUST00000054384 Gm4981Q3ULJ8 291 aa13.23□□□□□ -0.29
Trim56-201ENSMUST00000054384 Proca1B0QZF7 307 aa13.23□□□□□ -0.29
Trim56-201ENSMUST00000054384 Fen1P39749 378 aa13.23□□□□□ -0.29
Trim56-201ENSMUST00000054384 Slc12a2P55012 1205 aa13.23□□□□□ -0.29
Retrieved 100 of 22,080 RNA–protein pairs in 28.7 ms