RNA–Protein interactions for RNA: ENSMUST00000053871.4

Ckap4-201, Transcript of Cytoskeleton-associated protein 4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ckap4, Length 3,089 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap4-201ENSMUST00000053871 Mei4Q8BRM6 389 aa18.43■□□□□ 0.54
Ckap4-201ENSMUST00000053871 Cep89Q9CZX2 791 aa18.43■□□□□ 0.54
Ckap4-201ENSMUST00000053871 ParvgQ9ERD8 331 aa18.43■□□□□ 0.54
Ckap4-201ENSMUST00000053871 Elf2Q9JHC9 593 aa18.43■□□□□ 0.54
Ckap4-201ENSMUST00000053871 Cdc27A2A6Q5 825 aa18.42■□□□□ 0.54
Ckap4-201ENSMUST00000053871 Usp13Q5BKP2 858 aa18.42■□□□□ 0.54
Ckap4-201ENSMUST00000053871 Hps6Q8BLY7 805 aa18.42■□□□□ 0.54
Ckap4-201ENSMUST00000053871 Dnm3Q8BZ98 863 aa18.42■□□□□ 0.54
Ckap4-201ENSMUST00000053871 Ubac1Q8VDI7 409 aa18.42■□□□□ 0.54
Ckap4-201ENSMUST00000053871 Trim11Q99PQ2 467 aa18.42■□□□□ 0.54
Ckap4-201ENSMUST00000053871 Ccdc39Q9D5Y1 937 aa18.42■□□□□ 0.54
Ckap4-201ENSMUST00000053871 CoblQ5NBX1 1337 aaKnown RBP18.42■□□□□ 0.54
Ckap4-201ENSMUST00000053871 Stox1B2RQL2 990 aa18.42■□□□□ 0.54
Ckap4-201ENSMUST00000053871 Fkbp1aP26883 108 aaKnown RBP18.42■□□□□ 0.54
Ckap4-201ENSMUST00000053871 Foxp1P58462 705 aa18.42■□□□□ 0.54
Ckap4-201ENSMUST00000053871 Eva1cP58659 440 aa18.42■□□□□ 0.54
Ckap4-201ENSMUST00000053871 Slitrk3Q810B9 980 aa18.42■□□□□ 0.54
Ckap4-201ENSMUST00000053871 Tcp11l1Q8BTG3 509 aa18.42■□□□□ 0.54
Ckap4-201ENSMUST00000053871 Evc2Q8K1G2 1220 aa18.42■□□□□ 0.54
Ckap4-201ENSMUST00000053871 Dnaaf4Q8R368 420 aa18.42■□□□□ 0.54
Ckap4-201ENSMUST00000053871 Gnl2Q99LH1 728 aaKnown RBP18.42■□□□□ 0.54
Ckap4-201ENSMUST00000053871 Iqca1Q9CUL5 857 aa18.42■□□□□ 0.54
Ckap4-201ENSMUST00000053871 Irs4Q9Z0Y7 1216 aa18.42■□□□□ 0.54
Ckap4-201ENSMUST00000053871 4931408C20RikE9PWP9 1381 aa18.42■□□□□ 0.54
Ckap4-201ENSMUST00000053871 Pde4bB1AWC9 736 aa18.41■□□□□ 0.54
Ckap4-201ENSMUST00000053871 Terb1Q8C0V1 768 aa18.41■□□□□ 0.54
Ckap4-201ENSMUST00000053871 Ugt1a6bK9J7B2 531 aa18.41■□□□□ 0.54
Ckap4-201ENSMUST00000053871 Diaph1O08808 1255 aa18.41■□□□□ 0.54
Ckap4-201ENSMUST00000053871 Cd3dP04235 173 aa18.41■□□□□ 0.54
Ckap4-201ENSMUST00000053871 Cnnm2Q3TWN3 875 aa18.41■□□□□ 0.54
Ckap4-201ENSMUST00000053871 Spata5Q3UMC0 893 aaKnown RBP18.41■□□□□ 0.54
Ckap4-201ENSMUST00000053871 Ugt1a6Q64435 531 aa18.41■□□□□ 0.54
Ckap4-201ENSMUST00000053871 Slc44a1Q6X893 653 aa18.41■□□□□ 0.54
Ckap4-201ENSMUST00000053871 Ugt1a7cQ6ZQM8 531 aa18.41■□□□□ 0.54
Ckap4-201ENSMUST00000053871 Shank3Q4ACU6 1730 aa18.41■□□□□ 0.54
Ckap4-201ENSMUST00000053871 Siah1aP61092 282 aa18.41■□□□□ 0.54
Ckap4-201ENSMUST00000053871 Nme8Q715T0 586 aa18.41■□□□□ 0.54
Ckap4-201ENSMUST00000053871 Zfp397Q7TNK4 527 aa18.41■□□□□ 0.54
Ckap4-201ENSMUST00000053871 Otud6bQ8K2H2 294 aa18.41■□□□□ 0.54
Ckap4-201ENSMUST00000053871 Stk39Q9Z1W9 556 aa18.41■□□□□ 0.54
Ckap4-201ENSMUST00000053871 Zscan20B2KFW1 1030 aa18.4■□□□□ 0.54
Ckap4-201ENSMUST00000053871 Ginm1Q91WR6 327 aa18.4■□□□□ 0.54
Ckap4-201ENSMUST00000053871 Gm45140A0A0N4SUM8 220 aa18.4■□□□□ 0.54
Ckap4-201ENSMUST00000053871 Bnip3O55003 187 aa18.4■□□□□ 0.54
Ckap4-201ENSMUST00000053871 Anks1aP59672 1150 aa18.4■□□□□ 0.54
Ckap4-201ENSMUST00000053871 Fam83bQ0VBM2 1012 aa18.4■□□□□ 0.54
Ckap4-201ENSMUST00000053871 Ppp1r21Q3TDD9 780 aa18.4■□□□□ 0.54
Ckap4-201ENSMUST00000053871 Rbm15bQ6PHZ5 887 aaKnown RBP18.4■□□□□ 0.54
Ckap4-201ENSMUST00000053871 Cfap69Q8BH53 942 aa18.4■□□□□ 0.54
Ckap4-201ENSMUST00000053871 Myh7Q91Z83 1935 aa18.4■□□□□ 0.54
Ckap4-201ENSMUST00000053871 GdaQ9R111 454 aa18.4■□□□□ 0.54
Ckap4-201ENSMUST00000053871 A0A1Y7VML8 143 aa18.39■□□□□ 0.54
Ckap4-201ENSMUST00000053871 Frmd7A2AD83 703 aa18.39■□□□□ 0.54
Ckap4-201ENSMUST00000053871 Sf3b2Q3UJB0 878 aaKnown RBP18.39■□□□□ 0.54
Ckap4-201ENSMUST00000053871 Cdcp1Q5U462 833 aa18.39■□□□□ 0.54
Ckap4-201ENSMUST00000053871 Ccdc150Q8CDI7 1110 aa18.39■□□□□ 0.54
Ckap4-201ENSMUST00000053871 NenfQ9CQ45 171 aa18.39■□□□□ 0.54
Ckap4-201ENSMUST00000053871 Nmt2O70311 529 aa18.39■□□□□ 0.53
Ckap4-201ENSMUST00000053871 Arhgef16Q3U5C8 713 aa18.39■□□□□ 0.53
Ckap4-201ENSMUST00000053871 Ints4Q8CIM8 964 aa18.39■□□□□ 0.53
Ckap4-201ENSMUST00000053871 Col22a1E9Q7P1 1613 aa18.39■□□□□ 0.53
Ckap4-201ENSMUST00000053871 Sycp2lA0A0M3U1B0 842 aa18.38■□□□□ 0.53
Ckap4-201ENSMUST00000053871 IqcgQ80W32 419 aa18.38■□□□□ 0.53
Ckap4-201ENSMUST00000053871 NsmfQ99NF2 532 aa18.38■□□□□ 0.53
Ckap4-201ENSMUST00000053871 Dbndd1Q9CZ00 160 aa18.38■□□□□ 0.53
Ckap4-201ENSMUST00000053871 Hic2Q9JLZ6 619 aaKnown RBP18.38■□□□□ 0.53
Ckap4-201ENSMUST00000053871 Lekr1B2RVN1 116 aa18.38■□□□□ 0.53
Ckap4-201ENSMUST00000053871 Gm5624F6ZZG8 207 aa18.38■□□□□ 0.53
Ckap4-201ENSMUST00000053871 Taf3Q5HZG4 932 aa18.38■□□□□ 0.53
Ckap4-201ENSMUST00000053871 Ankrd40Q5SUE8 363 aa18.38■□□□□ 0.53
Ckap4-201ENSMUST00000053871 Krt39Q6IFX4 482 aa18.38■□□□□ 0.53
Ckap4-201ENSMUST00000053871 CtifQ6PEE2 600 aaKnown RBP18.38■□□□□ 0.53
Ckap4-201ENSMUST00000053871 Ankrd1Q9CR42 319 aa18.38■□□□□ 0.53
Ckap4-201ENSMUST00000053871 Atp8b5A3FIN4 1183 aa18.38■□□□□ 0.53
Ckap4-201ENSMUST00000053871 Celf1P28659 486 aaKnown RBP18.38■□□□□ 0.53
Ckap4-201ENSMUST00000053871 Cyp7b1Q60991 507 aa18.38■□□□□ 0.53
Ckap4-201ENSMUST00000053871 Dusp9Q7TNL7 452 aa18.38■□□□□ 0.53
Ckap4-201ENSMUST00000053871 Tktl2Q9D4D4 627 aa18.38■□□□□ 0.53
Ckap4-201ENSMUST00000053871 Tbc1d8bA3KGB4 1114 aa18.37■□□□□ 0.53
Ckap4-201ENSMUST00000053871 Prl7d1P04769 244 aa18.37■□□□□ 0.53
Ckap4-201ENSMUST00000053871 Sdc2P43407 202 aa18.37■□□□□ 0.53
Ckap4-201ENSMUST00000053871 Slc7a3P70423 618 aa18.37■□□□□ 0.53
Ckap4-201ENSMUST00000053871 Smarcc1P97496 1104 aa18.37■□□□□ 0.53
Ckap4-201ENSMUST00000053871 Slc27a1Q60714 646 aa18.37■□□□□ 0.53
Ckap4-201ENSMUST00000053871 Luc7l2Q7TNC4 392 aaKnown RBP18.37■□□□□ 0.53
Ckap4-201ENSMUST00000053871 Znf526Q8BI66 675 aa18.37■□□□□ 0.53
Ckap4-201ENSMUST00000053871 Wasf1Q8R5H6 559 aa18.37■□□□□ 0.53
Ckap4-201ENSMUST00000053871 Baiap2l1Q9DBJ3 514 aa18.37■□□□□ 0.53
Ckap4-201ENSMUST00000053871 Prr16A3KMN5 304 aa18.37■□□□□ 0.53
Ckap4-201ENSMUST00000053871 Stat5bP42232 786 aa18.37■□□□□ 0.53
Ckap4-201ENSMUST00000053871 Q3TYL0 343 aa18.37■□□□□ 0.53
Ckap4-201ENSMUST00000053871 Cyp4x1Q6A152 507 aa18.37■□□□□ 0.53
Ckap4-201ENSMUST00000053871 Klhl30Q8C3F7 581 aa18.37■□□□□ 0.53
Ckap4-201ENSMUST00000053871 Stag1Q9D3E6 1258 aa18.37■□□□□ 0.53
Ckap4-201ENSMUST00000053871 Phldb3E9QAF4 648 aa18.36■□□□□ 0.53
Ckap4-201ENSMUST00000053871 Gabpb2P81069 414 aa18.36■□□□□ 0.53
Ckap4-201ENSMUST00000053871 Fam89aQ14BJ1 175 aa18.36■□□□□ 0.53
Ckap4-201ENSMUST00000053871 MycbpapQ5SUV2 932 aa18.36■□□□□ 0.53
Ckap4-201ENSMUST00000053871 Ccp110Q7TSH4 1004 aa18.36■□□□□ 0.53
Ckap4-201ENSMUST00000053871 Tbc1d5Q80XQ2 815 aa18.36■□□□□ 0.53
Retrieved 100 of 22,080 RNA–protein pairs in 88.8 ms