RNA–Protein interactions for RNA: ENSMUST00000013771.14

Trim54-201, Transcript of Tripartite motif-containing protein 54, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Trim54, Length 1,434 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim54-201ENSMUST00000013771 NefhP19246 1090 aa20.64■□□□□ 0.89
Trim54-201ENSMUST00000013771 Zfp953Q3UPV7 304 aa20.64■□□□□ 0.89
Trim54-201ENSMUST00000013771 Krt40Q6IFX3 439 aa20.64■□□□□ 0.89
Trim54-201ENSMUST00000013771 Tmem266Q8BZB3 538 aa20.64■□□□□ 0.89
Trim54-201ENSMUST00000013771 Pus7B7ZNL8 666 aaKnown RBP20.63■□□□□ 0.89
Trim54-201ENSMUST00000013771 Ces1aE9PYP1 563 aa20.63■□□□□ 0.89
Trim54-201ENSMUST00000013771 Garem2Q6PAJ3 880 aa20.63■□□□□ 0.89
Trim54-201ENSMUST00000013771 Pank1Q8K4K6 548 aa20.63■□□□□ 0.89
Trim54-201ENSMUST00000013771 Sgpl1Q8R0X7 568 aa20.63■□□□□ 0.89
Trim54-201ENSMUST00000013771 Tsc2Q61037 1814 aa20.63■□□□□ 0.89
Trim54-201ENSMUST00000013771 Ep400Q8CHI8 3072 aaKnown RBP20.63■□□□□ 0.89
Trim54-201ENSMUST00000013771 Krt28A6BLY7 462 aa20.62■□□□□ 0.89
Trim54-201ENSMUST00000013771 Klhdc9Q3USL1 350 aa20.62■□□□□ 0.89
Trim54-201ENSMUST00000013771 Olfm4Q3UZZ4 505 aa20.62■□□□□ 0.89
Trim54-201ENSMUST00000013771 Fam205a1D3YZF6 1314 aa20.62■□□□□ 0.89
Trim54-201ENSMUST00000013771 SynrgQ5SV85 1306 aa20.62■□□□□ 0.89
Trim54-201ENSMUST00000013771 Pet2A2AHY8 747 aa20.61■□□□□ 0.89
Trim54-201ENSMUST00000013771 PtpraP18052 829 aa20.61■□□□□ 0.89
Trim54-201ENSMUST00000013771 Irf5P56477 497 aa20.61■□□□□ 0.89
Trim54-201ENSMUST00000013771 DbnlQ62418 436 aa20.61■□□□□ 0.89
Trim54-201ENSMUST00000013771 Hoxd10P28359 340 aa20.61■□□□□ 0.89
Trim54-201ENSMUST00000013771 Pla2g4fQ50L41 855 aa20.61■□□□□ 0.89
Trim54-201ENSMUST00000013771 Nme8Q715T0 586 aa20.61■□□□□ 0.89
Trim54-201ENSMUST00000013771 Fam205cQ80YD3 371 aa20.61■□□□□ 0.89
Trim54-201ENSMUST00000013771 Stn1Q8K2X3 378 aa20.61■□□□□ 0.89
Trim54-201ENSMUST00000013771 Fubp1Q91WJ8 651 aaKnown RBP20.61■□□□□ 0.89
Trim54-201ENSMUST00000013771 Rwdd1Q9CQK7 243 aa20.61■□□□□ 0.89
Trim54-201ENSMUST00000013771 Prkrip1Q9CWV6 186 aaKnown RBP20.61■□□□□ 0.89
Trim54-201ENSMUST00000013771 TnksQ6PFX9 1320 aa20.6■□□□□ 0.89
Trim54-201ENSMUST00000013771 Adgra3Q7TT36 1310 aa20.6■□□□□ 0.89
Trim54-201ENSMUST00000013771 Psmc4P54775 418 aa20.6■□□□□ 0.89
Trim54-201ENSMUST00000013771 Siah1aP61092 282 aa20.6■□□□□ 0.89
Trim54-201ENSMUST00000013771 Sv2cQ69ZS6 727 aa20.6■□□□□ 0.89
Trim54-201ENSMUST00000013771 Exoc8Q6PGF7 716 aa20.6■□□□□ 0.89
Trim54-201ENSMUST00000013771 Slc45a1Q8BIV7 751 aa20.6■□□□□ 0.89
Trim54-201ENSMUST00000013771 Itm2cQ91VK4 269 aa20.6■□□□□ 0.89
Trim54-201ENSMUST00000013771 MthfsQ9D110 203 aa20.6■□□□□ 0.89
Trim54-201ENSMUST00000013771 Leng1Q9DB98 261 aa20.6■□□□□ 0.89
Trim54-201ENSMUST00000013771 CarsQ9ER72 831 aaKnown RBP20.6■□□□□ 0.89
Trim54-201ENSMUST00000013771 FliiQ9JJ28 1271 aa20.6■□□□□ 0.89
Trim54-201ENSMUST00000013771 Ncf1Q09014 390 aa20.59■□□□□ 0.89
Trim54-201ENSMUST00000013771 Slc16a10Q3U9N9 512 aa20.59■□□□□ 0.89
Trim54-201ENSMUST00000013771 GnptabQ69ZN6 1235 aa20.59■□□□□ 0.89
Trim54-201ENSMUST00000013771 Gjc2Q8BQU6 440 aa20.59■□□□□ 0.89
Trim54-201ENSMUST00000013771 Myl6bQ8CI43 207 aa20.59■□□□□ 0.89
Trim54-201ENSMUST00000013771 Tbc1d23Q8K0F1 684 aa20.59■□□□□ 0.89
Trim54-201ENSMUST00000013771 1700018B08RikQ9DA83 213 aa20.59■□□□□ 0.89
Trim54-201ENSMUST00000013771 Ube3bQ9ES34 1070 aa20.59■□□□□ 0.89
Trim54-201ENSMUST00000013771 Med23Q80YQ2 1367 aa20.58■□□□□ 0.89
Trim54-201ENSMUST00000013771 Eef2P58252 858 aaKnown RBP20.58■□□□□ 0.88
Trim54-201ENSMUST00000013771 Ppp4cP97470 307 aa20.58■□□□□ 0.88
Trim54-201ENSMUST00000013771 SelpQ01102 768 aa20.58■□□□□ 0.88
Trim54-201ENSMUST00000013771 Prkag2Q91WG5 566 aa20.58■□□□□ 0.88
Trim54-201ENSMUST00000013771 Trim58Q5NCC9 485 aa20.57■□□□□ 0.88
Trim54-201ENSMUST00000013771 Dcaf15Q6PFH3 600 aa20.57■□□□□ 0.88
Trim54-201ENSMUST00000013771 Trmt2aQ8BNV1 574 aaKnown RBP20.57■□□□□ 0.88
Trim54-201ENSMUST00000013771 Slc26a8Q8R0C3 999 aa20.57■□□□□ 0.88
Trim54-201ENSMUST00000013771 Itgbl1Q8VDV0 494 aa20.57■□□□□ 0.88
Trim54-201ENSMUST00000013771 Elp3Q9CZX0 547 aa20.57■□□□□ 0.88
Trim54-201ENSMUST00000013771 Mmp8O70138 465 aa20.56■□□□□ 0.88
Trim54-201ENSMUST00000013771 Hsp90b1P08113 802 aaKnown RBP20.56■□□□□ 0.88
Trim54-201ENSMUST00000013771 FlgP11088 336 aa20.56■□□□□ 0.88
Trim54-201ENSMUST00000013771 Tm6sf1P58749 370 aa20.56■□□□□ 0.88
Trim54-201ENSMUST00000013771 Ppp4r2Q0VGB7 417 aa20.56■□□□□ 0.88
Trim54-201ENSMUST00000013771 Ltv1Q6NSQ7 470 aaKnown RBP20.56■□□□□ 0.88
Trim54-201ENSMUST00000013771 Plekha4Q8VC98 588 aa20.56■□□□□ 0.88
Trim54-201ENSMUST00000013771 Krt25Q8VCW2 446 aa20.56■□□□□ 0.88
Trim54-201ENSMUST00000013771 NesQ6P5H2 1864 aaKnown RBP20.56■□□□□ 0.88
Trim54-201ENSMUST00000013771 Has3O08650 554 aa20.55■□□□□ 0.88
Trim54-201ENSMUST00000013771 Esyt2Q3TZZ7 845 aa20.55■□□□□ 0.88
Trim54-201ENSMUST00000013771 Bag3Q9JLV1 577 aaKnown RBP20.55■□□□□ 0.88
Trim54-201ENSMUST00000013771 Phldb3E9QAF4 648 aa20.54■□□□□ 0.88
Trim54-201ENSMUST00000013771 D630036H23RikQ3UQD6 204 aa20.54■□□□□ 0.88
Trim54-201ENSMUST00000013771 Cyp24a1Q64441 514 aa20.54■□□□□ 0.88
Trim54-201ENSMUST00000013771 Nphp1Q9QY53 687 aa20.54■□□□□ 0.88
Trim54-201ENSMUST00000013771 Frmpd4A2AFR3 1320 aa20.54■□□□□ 0.88
Trim54-201ENSMUST00000013771 Mms22lB1AUR6 1238 aa20.53■□□□□ 0.88
Trim54-201ENSMUST00000013771 Nck2O55033 380 aa20.53■□□□□ 0.88
Trim54-201ENSMUST00000013771 Lamp1P11438 406 aaKnown RBP20.53■□□□□ 0.88
Trim54-201ENSMUST00000013771 Vcam1P29533 739 aa20.53■□□□□ 0.88
Trim54-201ENSMUST00000013771 Mov10l1Q99MV5 1187 aa20.53■□□□□ 0.88
Trim54-201ENSMUST00000013771 Chmp4bQ9D8B3 224 aaKnown RBP20.53■□□□□ 0.88
Trim54-201ENSMUST00000013771 Igsf9bE9PZ19 1328 aa20.53■□□□□ 0.88
Trim54-201ENSMUST00000013771 OgdhlE9Q7L0 1029 aa20.53■□□□□ 0.88
Trim54-201ENSMUST00000013771 AampJ3QN89 436 aa20.53■□□□□ 0.88
Trim54-201ENSMUST00000013771 B020004C17RikJ3QP07 232 aa20.53■□□□□ 0.88
Trim54-201ENSMUST00000013771 Zbtb9Q8CDC7 459 aa20.53■□□□□ 0.88
Trim54-201ENSMUST00000013771 Gpsm2Q8VDU0 679 aa20.53■□□□□ 0.88
Trim54-201ENSMUST00000013771 Znhit2Q9QY66 399 aa20.53■□□□□ 0.88
Trim54-201ENSMUST00000013771 Cyp3a57D3YYZ0 503 aa20.52■□□□□ 0.87
Trim54-201ENSMUST00000013771 Magea4F2Z493 315 aa20.52■□□□□ 0.87
Trim54-201ENSMUST00000013771 ThbdP15306 577 aa20.52■□□□□ 0.87
Trim54-201ENSMUST00000013771 CtshP49935 333 aa20.52■□□□□ 0.87
Trim54-201ENSMUST00000013771 Dynll1P63168 89 aa20.52■□□□□ 0.87
Trim54-201ENSMUST00000013771 Ngly1Q9JI78 651 aa20.52■□□□□ 0.87
Trim54-201ENSMUST00000013771 PrkczQ02956 592 aa20.51■□□□□ 0.87
Trim54-201ENSMUST00000013771 Nol8Q3UHX0 1147 aaKnown RBP20.51■□□□□ 0.87
Trim54-201ENSMUST00000013771 Fam196bQ6GQV1 535 aa20.51■□□□□ 0.87
Trim54-201ENSMUST00000013771 Prpf40bQ80W14 870 aa20.51■□□□□ 0.87
Trim54-201ENSMUST00000013771 Katnbl1Q9CWJ3 299 aa20.51■□□□□ 0.87
Retrieved 100 of 22,080 RNA–protein pairs in 15.8 ms