RNA–Protein interactions for RNA: YPL040C

ISM1, Transcript of Mitochondrial isoleucyl-tRNA synthetase, yeast

Gene ISM1, Length 3,009 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ISM1	YPL040C	SSA4	P22202	642 aa	Known RBP	5	□□□□□ -1.61
ISM1	YPL040C	SSF1	P38789	453 aa	Predicted RBP	5	□□□□□ -1.61
ISM1	YPL040C	RRN6	P32786	894 aa		5	□□□□□ -1.61
ISM1	YPL040C	ATF2	P53296	535 aa		5	□□□□□ -1.61
ISM1	YPL040C	BRL1	P38770	471 aa		4.99	□□□□□ -1.61
ISM1	YPL040C	BDF1	P35817	686 aa		4.99	□□□□□ -1.61
ISM1	YPL040C	OCA5	P38738	679 aa		4.99	□□□□□ -1.61
ISM1	YPL040C	ATG36	P46983	293 aa		4.99	□□□□□ -1.61
ISM1	YPL040C	TOP1	P04786	769 aa		4.99	□□□□□ -1.61
ISM1	YPL040C	ERG12	P07277	443 aa		4.99	□□□□□ -1.61
ISM1	YPL040C	TIF1	P10081	395 aa	Known RBP	4.99	□□□□□ -1.61
ISM1	YPL040C	KTR1	P27810	393 aa	Known RBP	4.99	□□□□□ -1.61
ISM1	YPL040C	DOS2	P54858	310 aa		4.99	□□□□□ -1.61
ISM1	YPL040C	YTA7	P40340	1379 aa		4.98	□□□□□ -1.61
ISM1	YPL040C	FAP1	P53971	965 aa		4.98	□□□□□ -1.61
ISM1	YPL040C	HEM3	P28789	327 aa		4.97	□□□□□ -1.61
ISM1	YPL040C	TTI1	P36097	1038 aa		4.97	□□□□□ -1.61
ISM1	YPL040C	YJL007C	P47080	104 aa		4.97	□□□□□ -1.61
ISM1	YPL040C	SSA2	P10592	639 aa	Known RBP	4.96	□□□□□ -1.62
ISM1	YPL040C	CPS1	P27614	576 aa		4.96	□□□□□ -1.62
ISM1	YPL040C	SLD2	P34252	453 aa		4.96	□□□□□ -1.62
ISM1	YPL040C	FAR11	P53917	953 aa		4.96	□□□□□ -1.62
ISM1	YPL040C	SPC42	P36094	363 aa		4.95	□□□□□ -1.62
ISM1	YPL040C	CSN12	P47130	423 aa		4.95	□□□□□ -1.62
ISM1	YPL040C	UBP14	P38237	781 aa	Known RBP	4.94	□□□□□ -1.62
ISM1	YPL040C	MET10	P39692	1035 aa		4.94	□□□□□ -1.62
ISM1	YPL040C	BIO2	P32451	375 aa		4.94	□□□□□ -1.62
ISM1	YPL040C	CDC3	P32457	520 aa	Known RBP	4.94	□□□□□ -1.62
ISM1	YPL040C	STS1	P38637	319 aa		4.94	□□□□□ -1.62
ISM1	YPL040C	RRP15	Q06511	250 aa	Predicted RBP	4.94	□□□□□ -1.62
ISM1	YPL040C	PUP1	P25043	261 aa		4.92	□□□□□ -1.62
ISM1	YPL040C	YML083C	Q04526	418 aa		4.92	□□□□□ -1.62
ISM1	YPL040C	PSE1	P32337	1089 aa	Known RBP	4.91	□□□□□ -1.62
ISM1	YPL040C	LAM6	Q08001	693 aa		4.91	□□□□□ -1.62
ISM1	YPL040C	ALD2	P47771	506 aa		4.9	□□□□□ -1.63
ISM1	YPL040C	SUP45	P12385	437 aa	Known RBP	4.89	□□□□□ -1.63
ISM1	YPL040C	PTC3	P34221	468 aa	Known RBP	4.89	□□□□□ -1.63
ISM1	YPL040C	YLR326W	Q06170	240 aa	Known RBP	4.89	□□□□□ -1.63
ISM1	YPL040C	URN1	Q06525	465 aa	Known RBP	4.89	□□□□□ -1.63
ISM1	YPL040C	MRPL32	P25348	183 aa		4.89	□□□□□ -1.63
ISM1	YPL040C	MIF2	P35201	549 aa		4.88	□□□□□ -1.63
ISM1	YPL040C	BRN1	P38170	754 aa		4.88	□□□□□ -1.63
ISM1	YPL040C	IPL1	P38991	367 aa		4.88	□□□□□ -1.63
ISM1	YPL040C	YMR1	P47147	688 aa	Known RBP RIP-Chip data	4.88	□□□□□ -1.63	not detected
ISM1	YPL040C	RPL34A	P87262	121 aa	Predicted RBP	4.88	□□□□□ -1.63
ISM1	YPL040C	RTG2	P32608	588 aa	Known RBP	4.87	□□□□□ -1.63
ISM1	YPL040C	HAT1	Q12341	374 aa		4.87	□□□□□ -1.63
ISM1	YPL040C	MRX10	Q05648	414 aa		4.87	□□□□□ -1.63
ISM1	YPL040C	YPR204W	Q08995	1032 aa		4.86	□□□□□ -1.63
ISM1	YPL040C	SWE1	P32944	819 aa		4.86	□□□□□ -1.63
ISM1	YPL040C	TYW1	Q08960	810 aa	Known RBP	4.86	□□□□□ -1.63
ISM1	YPL040C	VHR2	P40041	505 aa		4.85	□□□□□ -1.63
ISM1	YPL040C	ATE1	P16639	503 aa		4.85	□□□□□ -1.63
ISM1	YPL040C	ORC6	P38826	435 aa		4.85	□□□□□ -1.63
ISM1	YPL040C	TRL1	P09880	827 aa	Known RBP	4.83	□□□□□ -1.64
ISM1	YPL040C	CSE4	P36012	229 aa		4.83	□□□□□ -1.64
ISM1	YPL040C	PCS60	P38137	543 aa	Known RBP RIP-Chip data	4.83	□□□□□ -1.64	RIP-Chip
ISM1	YPL040C	ALD4	P46367	519 aa	Known RBP	4.83	□□□□□ -1.64
ISM1	YPL040C	YNL108C	P53929	270 aa		4.83	□□□□□ -1.64
ISM1	YPL040C	YAF9	P53930	226 aa		4.83	□□□□□ -1.64
ISM1	YPL040C	ENO1	P00924	437 aa	Known RBP	4.82	□□□□□ -1.64
ISM1	YPL040C	KEX1	P09620	729 aa		4.82	□□□□□ -1.64
ISM1	YPL040C	YBL036C	P38197	257 aa		4.82	□□□□□ -1.64
ISM1	YPL040C	STB3	Q12427	513 aa		4.82	□□□□□ -1.64
ISM1	YPL040C	DBP1	P24784	617 aa	Known RBP	4.82	□□□□□ -1.64
ISM1	YPL040C	ASF1	P32447	279 aa		4.82	□□□□□ -1.64
ISM1	YPL040C	PEP12	P32854	288 aa		4.82	□□□□□ -1.64
ISM1	YPL040C	RPL34B	P40525	121 aa	Known RBP	4.82	□□□□□ -1.64
ISM1	YPL040C	RIM21	P48565	533 aa		4.82	□□□□□ -1.64
ISM1	YPL040C	FPR4	Q06205	392 aa	Predicted RBP	4.82	□□□□□ -1.64
ISM1	YPL040C	MSC6	Q08818	692 aa	Known RBP	4.82	□□□□□ -1.64
ISM1	YPL040C	STM1	P39015	273 aa	Known RBP	4.81	□□□□□ -1.64
ISM1	YPL040C	NUG1	P40010	520 aa	Known RBP	4.81	□□□□□ -1.64
ISM1	YPL040C	MAG2	Q06436	670 aa	Known RBP	4.81	□□□□□ -1.64
ISM1	YPL040C	ENO2	P00925	437 aa	Known RBP	4.81	□□□□□ -1.64
ISM1	YPL040C	TGL4	P36165	910 aa		4.81	□□□□□ -1.64
ISM1	YPL040C	CST6	P40535	587 aa		4.81	□□□□□ -1.64
ISM1	YPL040C	TEA1	P47988	759 aa		4.81	□□□□□ -1.64
ISM1	YPL040C	ITT1	Q04638	464 aa		4.81	□□□□□ -1.64
ISM1	YPL040C	WHI5	Q12416	295 aa		4.81	□□□□□ -1.64
ISM1	YPL040C	HST2	P53686	357 aa		4.8	□□□□□ -1.64
ISM1	YPL040C	RGR1	P19263	1082 aa		4.8	□□□□□ -1.64
ISM1	YPL040C	SIS2	P36024	562 aa		4.8	□□□□□ -1.64
ISM1	YPL040C	NIS1	P53939	407 aa		4.8	□□□□□ -1.64
ISM1	YPL040C	RAD59	Q12223	238 aa		4.8	□□□□□ -1.64
ISM1	YPL040C	GAP1	P19145	602 aa	Predicted RBP	4.8	□□□□□ -1.64
ISM1	YPL040C	NMD2	P38798	1089 aa	Known RBP	4.8	□□□□□ -1.64
ISM1	YPL040C	SOL3	P38858	249 aa		4.8	□□□□□ -1.64
ISM1	YPL040C	RDS2	P19541	446 aa	Known RBP	4.79	□□□□□ -1.64
ISM1	YPL040C	YDJ1	P25491	409 aa	Known RBP	4.79	□□□□□ -1.64
ISM1	YPL040C	TPS3	P38426	1054 aa	Known RBP	4.79	□□□□□ -1.64
ISM1	YPL040C	RSC30	P38781	883 aa		4.79	□□□□□ -1.64
ISM1	YPL040C	ERP5	P38819	212 aa		4.79	□□□□□ -1.64
ISM1	YPL040C	YFR006W	P43590	535 aa		4.79	□□□□□ -1.64
ISM1	YPL040C	NST1	P53935	1240 aa		4.79	□□□□□ -1.64
ISM1	YPL040C	SVF1	Q05515	481 aa		4.79	□□□□□ -1.64
ISM1	YPL040C	YBL113C	Q7M4S9	792 aa		4.79	□□□□□ -1.64
ISM1	YPL040C	MDJ2	P42834	146 aa		4.78	□□□□□ -1.64
ISM1	YPL040C	YGR273C	P53329	174 aa		4.78	□□□□□ -1.64
ISM1	YPL040C	SEC20	P28791	383 aa		4.78	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 11.6 ms