RNA–Protein interactions for RNA: YDR194C

MSS116, Transcript of Mitochondrial transcription elongation factor, yeastyeast

Gene MSS116, Length 1,995 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSS116YDR194C ATG32P40458 529 aa8.73□□□□□ -1.01
MSS116YDR194C SSA2P10592 639 aaKnown RBP8.72□□□□□ -1.01
MSS116YDR194C IOC4Q04213 475 aa8.72□□□□□ -1.01
MSS116YDR194C YMR1P47147 688 aaKnown RBP RIP-Chip data8.72□□□□□ -1.01not detected
MSS116YDR194C SSA4P22202 642 aaKnown RBP8.7□□□□□ -1.02
MSS116YDR194C MRX12P47084 519 aa8.7□□□□□ -1.02
MSS116YDR194C CSN12P47130 423 aa8.7□□□□□ -1.02
MSS116YDR194C YDR090CQ03193 310 aa8.7□□□□□ -1.02
MSS116YDR194C SCY1P53009 804 aa8.7□□□□□ -1.02
MSS116YDR194C PTC3P34221 468 aaKnown RBP8.68□□□□□ -1.02
MSS116YDR194C UBP14P38237 781 aaKnown RBP8.67□□□□□ -1.02
MSS116YDR194C NOP7P53261 605 aaKnown RBP8.65□□□□□ -1.02
MSS116YDR194C DBP1P24784 617 aaKnown RBP8.64□□□□□ -1.03
MSS116YDR194C VHR2P40041 505 aa8.64□□□□□ -1.03
MSS116YDR194C YFR006WP43590 535 aa8.64□□□□□ -1.03
MSS116YDR194C ERG12P07277 443 aa8.64□□□□□ -1.03
MSS116YDR194C TIF1P10081 395 aaKnown RBP8.63□□□□□ -1.03
MSS116YDR194C SLD2P34252 453 aa8.62□□□□□ -1.03
MSS116YDR194C KTR1P27810 393 aaKnown RBP8.61□□□□□ -1.03
MSS116YDR194C PSE1P32337 1089 aaKnown RBP8.61□□□□□ -1.03
MSS116YDR194C CPS1P27614 576 aa8.61□□□□□ -1.03
MSS116YDR194C RPL34BP40525 121 aaKnown RBP8.59□□□□□ -1.03
MSS116YDR194C YLR326WQ06170 240 aaKnown RBP8.59□□□□□ -1.03
MSS116YDR194C SNU71P53207 620 aaKnown RBP8.59□□□□□ -1.03
MSS116YDR194C TTI1P36097 1038 aa8.58□□□□□ -1.04
MSS116YDR194C NOB1Q08444 459 aaKnown RBP8.58□□□□□ -1.04
MSS116YDR194C CDC3P32457 520 aaKnown RBP8.56□□□□□ -1.04
MSS116YDR194C RPL34AP87262 121 aaPredicted RBP8.56□□□□□ -1.04
MSS116YDR194C BIO2P32451 375 aa8.55□□□□□ -1.04
MSS116YDR194C YPR204WQ08995 1032 aa8.55□□□□□ -1.04
MSS116YDR194C PAM1P37304 830 aaKnown RBP8.54□□□□□ -1.04
MSS116YDR194C YBL036CP38197 257 aa8.53□□□□□ -1.04
MSS116YDR194C SSF1P38789 453 aaPredicted RBP8.53□□□□□ -1.04
MSS116YDR194C SEN54Q02825 467 aaPredicted RBP8.53□□□□□ -1.04
MSS116YDR194C TYW1Q08960 810 aaKnown RBP8.53□□□□□ -1.04
MSS116YDR194C YCK3P39962 524 aa8.53□□□□□ -1.04
MSS116YDR194C MAP2P38174 421 aaKnown RBP8.52□□□□□ -1.05
MSS116YDR194C KIC1P38692 1080 aa8.52□□□□□ -1.05
MSS116YDR194C RTG2P32608 588 aaKnown RBP8.52□□□□□ -1.05
MSS116YDR194C YOR238WQ08634 303 aa8.52□□□□□ -1.05
MSS116YDR194C TEA1P47988 759 aa8.51□□□□□ -1.05
MSS116YDR194C RRN6P32786 894 aa8.5□□□□□ -1.05
MSS116YDR194C HEM3P28789 327 aa8.49□□□□□ -1.05
MSS116YDR194C PCS60P38137 543 aaKnown RBP RIP-Chip data8.49□□□□□ -1.05not detected
MSS116YDR194C MET10P39692 1035 aa8.49□□□□□ -1.05
MSS116YDR194C UBP10P53874 792 aaPredicted RBP8.48□□□□□ -1.05
MSS116YDR194C RAD54P32863 898 aa8.48□□□□□ -1.05
MSS116YDR194C YML083CQ04526 418 aa8.47□□□□□ -1.05
MSS116YDR194C ORC6P38826 435 aa8.46□□□□□ -1.05
MSS116YDR194C YNL108CP53929 270 aa8.46□□□□□ -1.05
MSS116YDR194C YGR273CP53329 174 aa8.46□□□□□ -1.06
MSS116YDR194C PUP1P25043 261 aa8.45□□□□□ -1.06
MSS116YDR194C ATH1P48016 1211 aa8.45□□□□□ -1.06
MSS116YDR194C KEX1P09620 729 aa8.44□□□□□ -1.06
MSS116YDR194C GUT1P32190 709 aa8.44□□□□□ -1.06
MSS116YDR194C SLX5P32828 619 aaKnown RBP8.44□□□□□ -1.06
MSS116YDR194C HAT1Q12341 374 aa8.44□□□□□ -1.06
MSS116YDR194C SUP45P12385 437 aaKnown RBP8.42□□□□□ -1.06
MSS116YDR194C CSE4P36012 229 aa8.42□□□□□ -1.06
MSS116YDR194C GRE2Q12068 342 aaKnown RBP8.42□□□□□ -1.06
MSS116YDR194C VMA1P17255 1071 aaKnown RBP8.41□□□□□ -1.06
MSS116YDR194C RGR1P19263 1082 aa8.41□□□□□ -1.06
MSS116YDR194C RAD59Q12223 238 aa8.41□□□□□ -1.06
MSS116YDR194C HST2P53686 357 aa8.4□□□□□ -1.06
MSS116YDR194C NIS1P53939 407 aa8.4□□□□□ -1.06
MSS116YDR194C SOL3P38858 249 aa8.39□□□□□ -1.07
MSS116YDR194C HAA1Q12753 694 aaKnown RBP8.39□□□□□ -1.07
MSS116YDR194C ENO1P00924 437 aaKnown RBP8.38□□□□□ -1.07
MSS116YDR194C FPK1P53739 893 aa8.38□□□□□ -1.07
MSS116YDR194C PKH3Q03306 898 aaPredicted RBP8.38□□□□□ -1.07
MSS116YDR194C PIB1Q06651 286 aa8.38□□□□□ -1.07
MSS116YDR194C CLB5P30283 435 aa8.37□□□□□ -1.07
MSS116YDR194C MRX10Q05648 414 aa8.37□□□□□ -1.07
MSS116YDR194C SIS2P36024 562 aa8.36□□□□□ -1.07
MSS116YDR194C ENO2P00925 437 aaKnown RBP8.35□□□□□ -1.07
MSS116YDR194C ESS1P22696 170 aa8.35□□□□□ -1.07
MSS116YDR194C MMP1Q12372 583 aa8.35□□□□□ -1.07
MSS116YDR194C MVP1P40959 511 aaKnown RBP8.35□□□□□ -1.07
MSS116YDR194C SCJ1P25303 377 aa8.34□□□□□ -1.07
MSS116YDR194C YTA7P40340 1379 aa8.34□□□□□ -1.07
MSS116YDR194C YDJ1P25491 409 aaKnown RBP8.33□□□□□ -1.08
MSS116YDR194C TGL4P36165 910 aa8.33□□□□□ -1.08
MSS116YDR194C YJU3P28321 313 aa8.33□□□□□ -1.08
MSS116YDR194C IPL1P38991 367 aa8.33□□□□□ -1.08
MSS116YDR194C YMR196WQ04336 1088 aa8.33□□□□□ -1.08
MSS116YDR194C NSR1P27476 414 aaKnown RBP RIP-Chip data8.31□□□□□ -1.08not detected
MSS116YDR194C RIM21P48565 533 aa8.31□□□□□ -1.08
MSS116YDR194C ITT1Q04638 464 aa8.31□□□□□ -1.08
MSS116YDR194C STM1P39015 273 aaKnown RBP8.3□□□□□ -1.08
MSS116YDR194C SPT5P27692 1063 aaKnown RBP8.3□□□□□ -1.08
MSS116YDR194C OCA5P38738 679 aa8.3□□□□□ -1.08
MSS116YDR194C NST1P53935 1240 aa8.3□□□□□ -1.08
MSS116YDR194C GAP1P19145 602 aaPredicted RBP8.29□□□□□ -1.08
MSS116YDR194C ASF1P32447 279 aa8.29□□□□□ -1.08
MSS116YDR194C SAM3Q08986 587 aa8.29□□□□□ -1.08
MSS116YDR194C ARG8P18544 423 aa8.28□□□□□ -1.08
MSS116YDR194C ALD2P47771 506 aa8.28□□□□□ -1.08
MSS116YDR194C YBL113CQ7M4S9 792 aa8.28□□□□□ -1.08
MSS116YDR194C PEP12P32854 288 aa8.26□□□□□ -1.09
MSS116YDR194C YAP5P40574 245 aa8.26□□□□□ -1.09
Retrieved 100 of 5,963 RNA–protein pairs in 12.7 ms