RNA–Protein interactions for RNA: YBL054W

TOD6, Transcript of PAC motif binding protein involved in rRNA and ribosome biogenesis, yeastyeast

Gene TOD6, Length 1,578 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TOD6YBL054W TY1B-LR3P0C2I6 1755 aaKnown RBP9.43□□□□□ -0.9
TOD6YBL054W TY1B-PR1P0C2I9 1755 aaKnown RBP9.43□□□□□ -0.9
TOD6YBL054W TY1B-PR2P0C2J0 1756 aa9.43□□□□□ -0.9
TOD6YBL054W TY1B-PR3P0C2J1 1755 aaKnown RBP9.43□□□□□ -0.9
TOD6YBL054W TY1B-JR1P47098 1755 aa9.43□□□□□ -0.9
TOD6YBL054W TY1B-ML2Q03434 1755 aaKnown RBP9.43□□□□□ -0.9
TOD6YBL054W TY1B-ER1Q03612 1755 aa9.43□□□□□ -0.9
TOD6YBL054W TY1B-ML1Q04711 1755 aaKnown RBP9.43□□□□□ -0.9
TOD6YBL054W TY1B-GR2Q12269 1755 aa9.43□□□□□ -0.9
TOD6YBL054W TY1B-OLQ12273 1755 aa9.43□□□□□ -0.9
TOD6YBL054W TY1B-PLQ12414 1755 aaKnown RBP9.43□□□□□ -0.9
TOD6YBL054W EBP2P36049 427 aaKnown RBP9.41□□□□□ -0.9
TOD6YBL054W YPR148CQ06523 435 aa9.41□□□□□ -0.9
TOD6YBL054W GCN2P15442 1659 aa9.38□□□□□ -0.91
TOD6YBL054W MHP1P43638 1398 aa9.38□□□□□ -0.91
TOD6YBL054W PSD2P53037 1138 aaKnown RBP9.37□□□□□ -0.91
TOD6YBL054W SNT2P53127 1403 aa9.37□□□□□ -0.91
TOD6YBL054W TY1B-BRQ12193 1756 aa9.36□□□□□ -0.91
TOD6YBL054W TY1B-GR3Q12316 1755 aa9.36□□□□□ -0.91
TOD6YBL054W TY1B-ORQ92393 1755 aa9.36□□□□□ -0.91
TOD6YBL054W CFT1Q06632 1357 aaKnown RBP9.35□□□□□ -0.91
TOD6YBL054W CAT8P39113 1433 aa9.34□□□□□ -0.91
TOD6YBL054W PDR5P33302 1511 aaKnown RBP9.33□□□□□ -0.92
TOD6YBL054W IRC20Q06554 1556 aa9.33□□□□□ -0.92
TOD6YBL054W NOP7P53261 605 aaKnown RBP9.3□□□□□ -0.92
TOD6YBL054W TY1B-JR2P47100 1755 aaKnown RBP9.3□□□□□ -0.92
TOD6YBL054W TY1B-ER2Q03619 1755 aa9.3□□□□□ -0.92
TOD6YBL054W TY1B-MR1Q04214 1755 aa9.3□□□□□ -0.92
TOD6YBL054W TY1B-MR2Q04670 1755 aaKnown RBP9.3□□□□□ -0.92
TOD6YBL054W TY1B-LR1Q12088 1755 aaKnown RBP9.3□□□□□ -0.92
TOD6YBL054W TY1B-NL1Q12112 1755 aa9.3□□□□□ -0.92
TOD6YBL054W TY1B-GR1Q12141 1755 aa9.3□□□□□ -0.92
TOD6YBL054W TY1B-BLQ12490 1755 aa9.3□□□□□ -0.92
TOD6YBL054W GEA2P39993 1459 aaKnown RBP9.29□□□□□ -0.92
TOD6YBL054W RQC2Q12532 1038 aaKnown RBP9.28□□□□□ -0.92
TOD6YBL054W ARO1P08566 1588 aaKnown RBP9.27□□□□□ -0.93
TOD6YBL054W GDB1Q06625 1536 aa9.25□□□□□ -0.93
TOD6YBL054W IME2P32581 645 aa9.24□□□□□ -0.93
TOD6YBL054W CDC25P04821 1589 aa9.24□□□□□ -0.93
TOD6YBL054W MTC1P47018 478 aaKnown RBP9.22□□□□□ -0.93
TOD6YBL054W CLC1P17891 233 aa9.21□□□□□ -0.93
TOD6YBL054W ORC1P54784 914 aaPredicted RBP9.21□□□□□ -0.93
TOD6YBL054W NTE1Q04958 1679 aa9.21□□□□□ -0.93
TOD6YBL054W RPC31P17890 251 aa9.2□□□□□ -0.94
TOD6YBL054W FUN12P39730 1002 aaKnown RBP9.19□□□□□ -0.94
TOD6YBL054W YFR016CP43597 1233 aaKnown RBP9.18□□□□□ -0.94
TOD6YBL054W RPO21P04050 1733 aaKnown RBP9.18□□□□□ -0.94
TOD6YBL054W TY3B-IQ7LHG5 1498 aaKnown RBP9.17□□□□□ -0.94
TOD6YBL054W PDR12Q02785 1511 aa9.16□□□□□ -0.94
TOD6YBL054W OPY1P38271 328 aa9.16□□□□□ -0.94
TOD6YBL054W IQG1Q12280 1495 aa9.16□□□□□ -0.94
TOD6YBL054W CKB1P43639 278 aa9.16□□□□□ -0.94
TOD6YBL054W EAF7P53911 425 aaKnown RBP9.16□□□□□ -0.94
TOD6YBL054W PDS5Q04264 1277 aa9.15□□□□□ -0.95
TOD6YBL054W BUD21Q08492 214 aaPredicted RBP9.13□□□□□ -0.95
TOD6YBL054W YOR093CQ12275 1648 aa9.13□□□□□ -0.95
TOD6YBL054W PAF1P38351 445 aa9.12□□□□□ -0.95
TOD6YBL054W NST1P53935 1240 aa9.12□□□□□ -0.95
TOD6YBL054W MMS1Q06211 1407 aa9.1□□□□□ -0.95
TOD6YBL054W BUD3P25558 1636 aa9.09□□□□□ -0.95
TOD6YBL054W FPR3P38911 411 aaKnown RBP9.08□□□□□ -0.96
TOD6YBL054W CDC45Q08032 650 aa9.07□□□□□ -0.96
TOD6YBL054W RPA190P10964 1664 aaKnown RBP9.07□□□□□ -0.96
TOD6YBL054W MNN4P36044 1178 aa9.07□□□□□ -0.96
TOD6YBL054W LTE1P07866 1435 aa9.06□□□□□ -0.96
TOD6YBL054W RPP0P05317 312 aaKnown RBP9.06□□□□□ -0.96
TOD6YBL054W VPS27P40343 622 aaKnown RBP9.05□□□□□ -0.96
TOD6YBL054W TCB2P48231 1178 aa9.05□□□□□ -0.96
TOD6YBL054W SPO14P36126 1683 aa9.05□□□□□ -0.96
TOD6YBL054W RVB2Q12464 471 aaKnown RBP9.04□□□□□ -0.96
TOD6YBL054W SNF7P39929 240 aaKnown RBP9.03□□□□□ -0.96
TOD6YBL054W YSP2Q06681 1438 aa9.02□□□□□ -0.97
TOD6YBL054W FAP1P53971 965 aa9.01□□□□□ -0.97
TOD6YBL054W CHC1P22137 1653 aaKnown RBP9.01□□□□□ -0.97
TOD6YBL054W NUP157P40064 1391 aaKnown RBP9.01□□□□□ -0.97
TOD6YBL054W DNF2Q12675 1612 aa9.01□□□□□ -0.97
TOD6YBL054W YIR014WP40570 242 aa9□□□□□ -0.97
TOD6YBL054W RAV1P47104 1357 aa9□□□□□ -0.97
TOD6YBL054W DOP1Q03921 1698 aa9□□□□□ -0.97
TOD6YBL054W ABP1P15891 592 aaKnown RBP8.99□□□□□ -0.97
TOD6YBL054W TAF5P38129 798 aa8.99□□□□□ -0.97
TOD6YBL054W KIP3P53086 805 aaKnown RBP8.99□□□□□ -0.97
TOD6YBL054W RTC1Q08281 1341 aa8.98□□□□□ -0.97
TOD6YBL054W ROX1P25042 368 aa8.95□□□□□ -0.98
TOD6YBL054W YRB30P53107 440 aaPredicted RBP8.95□□□□□ -0.98
TOD6YBL054W YDL144CQ07589 356 aa8.95□□□□□ -0.98
TOD6YBL054W MET10P39692 1035 aa8.93□□□□□ -0.98
TOD6YBL054W SNF2P22082 1703 aa8.93□□□□□ -0.98
TOD6YBL054W DRS2P39524 1355 aa8.92□□□□□ -0.98
TOD6YBL054W PDR11P40550 1411 aa8.92□□□□□ -0.98
TOD6YBL054W SCT1P32784 759 aa8.91□□□□□ -0.98
TOD6YBL054W ESL2P36168 1195 aa8.91□□□□□ -0.98
TOD6YBL054W LEO1P38439 464 aa8.91□□□□□ -0.98
TOD6YBL054W PCT1P13259 424 aa8.9□□□□□ -0.98
TOD6YBL054W SUI2P20459 304 aaKnown RBP8.9□□□□□ -0.98
TOD6YBL054W NUP192P47054 1683 aa8.9□□□□□ -0.99
TOD6YBL054W MLP1Q02455 1875 aaKnown RBP8.89□□□□□ -0.99
TOD6YBL054W DJP1P40564 432 aa8.89□□□□□ -0.99
TOD6YBL054W VMR1P38735 1592 aa8.89□□□□□ -0.99
TOD6YBL054W SLN1P39928 1220 aaPredicted RBP8.88□□□□□ -0.99
Retrieved 100 of 5,963 RNA–protein pairs in 44.5 ms