RNA–Protein interactions for RNA: ENST00000611776.4

ABCA13-208, Transcript of ATP binding cassette subfamily A member 13, humanhuman

TSL 1 (best)

Gene ABCA13, Length 7,250 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA13-208ENST00000611776 DCAF8Q5TAQ9 597 aa9.67□□□□□ -0.86
ABCA13-208ENST00000611776 GTF3C3Q9Y5Q9 886 aa9.66□□□□□ -0.86
ABCA13-208ENST00000611776 NEUROD1Q13562 356 aa9.66□□□□□ -0.86
ABCA13-208ENST00000611776 NEFLP07196 543 aa9.66□□□□□ -0.86
ABCA13-208ENST00000611776 PAXIP1Q6ZW49 1069 aaPredicted RBP9.65□□□□□ -0.86
ABCA13-208ENST00000611776 DIEXFQ68CQ4 756 aaKnown RBP9.65□□□□□ -0.86
ABCA13-208ENST00000611776 ZNF330Q9Y3S2 320 aaPredicted RBP9.64□□□□□ -0.87
ABCA13-208ENST00000611776 TSPY4P0CV99 314 aa9.62□□□□□ -0.87
ABCA13-208ENST00000611776 TSPY10P0CW01 314 aa9.62□□□□□ -0.87
ABCA13-208ENST00000611776 FAM69CQ0P6D2 419 aa9.62□□□□□ -0.87
ABCA13-208ENST00000611776 ISY1Q9ULR0 285 aaKnown RBP9.62□□□□□ -0.87
ABCA13-208ENST00000611776 PLEKHD1A6NEE1 506 aa9.61□□□□□ -0.87
ABCA13-208ENST00000611776 GOLGA2Q08379 1002 aa9.61□□□□□ -0.87
ABCA13-208ENST00000611776 GGT6Q6P531 493 aa9.61□□□□□ -0.87
ABCA13-208ENST00000611776 CANXP27824 592 aaKnown RBP9.6□□□□□ -0.87
ABCA13-208ENST00000611776 EVA1CP58658 441 aa9.59□□□□□ -0.87
ABCA13-208ENST00000611776 PPM1GO15355 546 aaPredicted RBP9.59□□□□□ -0.87
ABCA13-208ENST00000611776 HDGFP51858 240 aaKnown RBP9.59□□□□□ -0.87
ABCA13-208ENST00000611776 SCRIBQ14160 1630 aa9.57□□□□□ -0.88
ABCA13-208ENST00000611776 POGKQ9P215 609 aa9.56□□□□□ -0.88
ABCA13-208ENST00000611776 CHIC2Q9UKJ5 165 aa9.56□□□□□ -0.88
ABCA13-208ENST00000611776 EID1Q9Y6B2 187 aa9.55□□□□□ -0.88
ABCA13-208ENST00000611776 NEUROD2Q15784 382 aa9.54□□□□□ -0.88
ABCA13-208ENST00000611776 CWC22Q9HCG8 908 aaKnown RBP9.53□□□□□ -0.88
ABCA13-208ENST00000611776 KDM2AQ9Y2K7 1162 aa9.53□□□□□ -0.88
ABCA13-208ENST00000611776 ZNF316A6NFI3 1004 aaPredicted RBP9.52□□□□□ -0.88
ABCA13-208ENST00000611776 CDK11BP21127 795 aaKnown RBP9.52□□□□□ -0.88
ABCA13-208ENST00000611776 TMC1Q8TDI8 760 aa9.52□□□□□ -0.88
ABCA13-208ENST00000611776 CECR2Q9BXF3 1484 aa9.5□□□□□ -0.89
ABCA13-208ENST00000611776 GRM1Q13255 1194 aa9.5□□□□□ -0.89
ABCA13-208ENST00000611776 C16orf71Q8IYS4 520 aaPredicted RBP9.49□□□□□ -0.89
ABCA13-208ENST00000611776 SYTL4Q96C24 671 aaPredicted RBP9.49□□□□□ -0.89
ABCA13-208ENST00000611776 CLSTN1O94985 981 aa9.48□□□□□ -0.89
ABCA13-208ENST00000611776 PRM3Q9NNZ6 103 aa9.48□□□□□ -0.89
ABCA13-208ENST00000611776 NUTM2FA1L443 756 aa9.47□□□□□ -0.89
ABCA13-208ENST00000611776 TAOK2Q9UL54 1235 aa9.47□□□□□ -0.89
ABCA13-208ENST00000611776 SAFB2Q14151 953 aaKnown RBP eCLIP9.47□□□□□ -0.89
ABCA13-208ENST00000611776 GTF2E1P29083 439 aaPredicted RBP9.47□□□□□ -0.89
ABCA13-208ENST00000611776 FKBP8Q14318 412 aa9.46□□□□□ -0.89
ABCA13-208ENST00000611776 UBAP1LF5GYI3 381 aa9.44□□□□□ -0.9
ABCA13-208ENST00000611776 STK26Q9P289 416 aa9.43□□□□□ -0.9
ABCA13-208ENST00000611776 RGL3Q3MIN7 710 aa9.43□□□□□ -0.9
ABCA13-208ENST00000611776 ATF3P18847 181 aa9.43□□□□□ -0.9
ABCA13-208ENST00000611776 ACIN1Q9UKV3 1341 aaKnown RBP9.42□□□□□ -0.9
ABCA13-208ENST00000611776 SRPK2P78362 688 aaKnown RBP9.42□□□□□ -0.9
ABCA13-208ENST00000611776 EIF4G2P78344 907 aaKnown RBP eCLIP9.4□□□□□ -0.9
ABCA13-208ENST00000611776 FBXW7Q969H0 707 aa9.4□□□□□ -0.91
ABCA13-208ENST00000611776 USP35Q9P2H5 1018 aa9.38□□□□□ -0.91
ABCA13-208ENST00000611776 DISP3Q9P2K9 1392 aa9.38□□□□□ -0.91
ABCA13-208ENST00000611776 CNKSR2Q8WXI2 1034 aa9.36□□□□□ -0.91
ABCA13-208ENST00000611776 CSRNP3Q8WYN3 585 aa9.36□□□□□ -0.91
ABCA13-208ENST00000611776 WDR70Q9NW82 654 aa9.35□□□□□ -0.91
ABCA13-208ENST00000611776 CAPN15O75808 1086 aa9.33□□□□□ -0.92
ABCA13-208ENST00000611776 MYO15BQ96JP2 1530 aa9.33□□□□□ -0.92
ABCA13-208ENST00000611776 NGDNQ8NEJ9 315 aaKnown RBP9.33□□□□□ -0.92
ABCA13-208ENST00000611776 RB1CC1Q8TDY2 1594 aa9.32□□□□□ -0.92
ABCA13-208ENST00000611776 CCAR1Q8IX12 1150 aaKnown RBP9.31□□□□□ -0.92
ABCA13-208ENST00000611776 LTV1Q96GA3 475 aaPredicted RBP9.31□□□□□ -0.92
ABCA13-208ENST00000611776 CFDP1Q9UEE9 299 aaPredicted RBP9.3□□□□□ -0.92
ABCA13-208ENST00000611776 AMER1Q5JTC6 1135 aaPredicted RBP9.3□□□□□ -0.92
ABCA13-208ENST00000611776 LAS1LQ9Y4W2 734 aaKnown RBP9.29□□□□□ -0.92
ABCA13-208ENST00000611776 EIF4G1Q04637 1599 aaKnown RBP9.29□□□□□ -0.92
ABCA13-208ENST00000611776 ADAMTS2O95450 1211 aa9.29□□□□□ -0.92
ABCA13-208ENST00000611776 PROSER2Q86WR7 435 aaPredicted RBP9.29□□□□□ -0.92
ABCA13-208ENST00000611776 BEGAINQ9BUH8 593 aa9.27□□□□□ -0.92
ABCA13-208ENST00000611776 NGLY1Q96IV0 654 aa9.27□□□□□ -0.93
ABCA13-208ENST00000611776 FBXO3Q9UK99 471 aa9.27□□□□□ -0.93
ABCA13-208ENST00000611776 STRN4Q9NRL3 753 aa9.27□□□□□ -0.93
ABCA13-208ENST00000611776 DMRT2Q9Y5R5 561 aa9.27□□□□□ -0.93
ABCA13-208ENST00000611776 FRAT2O75474 233 aaPredicted RBP9.26□□□□□ -0.93
ABCA13-208ENST00000611776 SAMD1Q6SPF0 538 aaPredicted RBP9.26□□□□□ -0.93
ABCA13-208ENST00000611776 SALL2Q9Y467 1007 aaPredicted RBP9.26□□□□□ -0.93
ABCA13-208ENST00000611776 TNNT2P45379 298 aaPredicted RBP9.26□□□□□ -0.93
ABCA13-208ENST00000611776 PDE3BQ13370 1112 aa9.26□□□□□ -0.93
ABCA13-208ENST00000611776 CTDP1Q9Y5B0 961 aaPredicted RBP9.25□□□□□ -0.93
ABCA13-208ENST00000611776 KANK1Q14678 1352 aa9.25□□□□□ -0.93
ABCA13-208ENST00000611776 RTL5Q5HYW3 569 aaPredicted RBP9.25□□□□□ -0.93
ABCA13-208ENST00000611776 WWC3Q9ULE0 1092 aa9.25□□□□□ -0.93
ABCA13-208ENST00000611776 WASHC2CQ9Y4E1 1318 aa9.24□□□□□ -0.93
ABCA13-208ENST00000611776 MAP3K9P80192 1104 aa9.24□□□□□ -0.93
ABCA13-208ENST00000611776 NBR1Q14596 966 aa9.24□□□□□ -0.93
ABCA13-208ENST00000611776 CLEC11AQ9Y240 323 aa9.23□□□□□ -0.93
ABCA13-208ENST00000611776 RAD21O60216 631 aa9.23□□□□□ -0.93
ABCA13-208ENST00000611776 MYCNP04198 464 aaPredicted RBP9.23□□□□□ -0.93
ABCA13-208ENST00000611776 TOM1O60784 492 aa9.23□□□□□ -0.93
ABCA13-208ENST00000611776 PDS5BQ9NTI5 1447 aa9.23□□□□□ -0.93
ABCA13-208ENST00000611776 PSME1Q06323 249 aa9.23□□□□□ -0.93
ABCA13-208ENST00000611776 MTUS2Q5JR59 1369 aa9.22□□□□□ -0.93
ABCA13-208ENST00000611776 RRP7BPQ9NSQ0 103 aa9.22□□□□□ -0.93
ABCA13-208ENST00000611776 HNRNPMP52272 730 aaKnown RBP eCLIP9.21□□□□□ -0.94
ABCA13-208ENST00000611776 BCL11BQ9C0K0 894 aaPredicted RBP9.21□□□□□ -0.94
ABCA13-208ENST00000611776 TRIM34Q9BYJ4 488 aa9.2□□□□□ -0.94
ABCA13-208ENST00000611776 KIF3BO15066 747 aa9.19□□□□□ -0.94
ABCA13-208ENST00000611776 TTLL12Q14166 644 aaPredicted RBP9.19□□□□□ -0.94
ABCA13-208ENST00000611776 CHMP3Q9Y3E7 222 aa9.19□□□□□ -0.94
ABCA13-208ENST00000611776 SMARCA2P51531 1590 aa9.18□□□□□ -0.94
ABCA13-208ENST00000611776 OS9Q13438 667 aaPredicted RBP9.18□□□□□ -0.94
ABCA13-208ENST00000611776 IRX6P78412 446 aaPredicted RBP9.17□□□□□ -0.94
ABCA13-208ENST00000611776 GPR162Q16538 588 aa9.17□□□□□ -0.94
ABCA13-208ENST00000611776 MIER1Q8N108 512 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms