RNA–Protein interactions for RNA: ENST00000584437.5

RNF43-208, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF43, Length 5,575 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-208ENST00000584437 MTUS2Q5JR59 1369 aa17.13■□□□□ 0.33
RNF43-208ENST00000584437 SUPT16HQ9Y5B9 1047 aaKnown RBP17.13■□□□□ 0.33
RNF43-208ENST00000584437 NOP58Q9Y2X3 529 aaKnown RBP17.12■□□□□ 0.33
RNF43-208ENST00000584437 HIRIP3Q9BW71 556 aaPredicted RBP17.12■□□□□ 0.33
RNF43-208ENST00000584437 ESF1Q9H501 851 aaKnown RBP17.11■□□□□ 0.33
RNF43-208ENST00000584437 TSPY4P0CV99 314 aa17.11■□□□□ 0.33
RNF43-208ENST00000584437 TSPY10P0CW01 314 aa17.11■□□□□ 0.33
RNF43-208ENST00000584437 KDM2AQ9Y2K7 1162 aa17.1■□□□□ 0.33
RNF43-208ENST00000584437 PTMAP06454 111 aaKnown RBP17.08■□□□□ 0.33
RNF43-208ENST00000584437 EEA1Q15075 1411 aa17.07■□□□□ 0.32
RNF43-208ENST00000584437 NAP1L5Q96NT1 182 aaPredicted RBP17.06■□□□□ 0.32
RNF43-208ENST00000584437 ZCCHC6Q5VYS8 1495 aaKnown RBP17.05■□□□□ 0.32
RNF43-208ENST00000584437 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.05■□□□□ 0.326e-9■■□□□ 14.4
RNF43-208ENST00000584437 CDK11BP21127 795 aaKnown RBP17.04■□□□□ 0.32
RNF43-208ENST00000584437 DNTTIP2Q5QJE6 756 aaKnown RBP17.02■□□□□ 0.32
RNF43-208ENST00000584437 SCRIBQ14160 1630 aa17.01■□□□□ 0.31
RNF43-208ENST00000584437 CEP162Q5TB80 1403 aa17.01■□□□□ 0.31
RNF43-208ENST00000584437 LAS1LQ9Y4W2 734 aaKnown RBP17.01■□□□□ 0.31
RNF43-208ENST00000584437 GOLGA3Q08378 1498 aa17■□□□□ 0.31
RNF43-208ENST00000584437 CASC1Q6TDU7 716 aa17■□□□□ 0.31
RNF43-208ENST00000584437 RSF1Q96T23 1441 aaPredicted RBP16.99■□□□□ 0.31
RNF43-208ENST00000584437 MYO15BQ96JP2 1530 aa16.99■□□□□ 0.31
RNF43-208ENST00000584437 CDCA8Q53HL2 280 aa16.98■□□□□ 0.31
RNF43-208ENST00000584437 CFAP53Q96M91 514 aa16.97■□□□□ 0.31
RNF43-208ENST00000584437 RTN4Q9NQC3 1192 aaKnown RBP16.97■□□□□ 0.31
RNF43-208ENST00000584437 ZRSR1Q15695 479 aaKnown RBP16.97■□□□□ 0.31
RNF43-208ENST00000584437 RRP7BPQ9NSQ0 103 aa16.94■□□□□ 0.3
RNF43-208ENST00000584437 DEKP35659 375 aaKnown RBP16.93■□□□□ 0.3
RNF43-208ENST00000584437 L1TD1Q5T7N2 865 aaKnown RBP16.93■□□□□ 0.3
RNF43-208ENST00000584437 FTSJ3Q8IY81 847 aaKnown RBP16.93■□□□□ 0.3
RNF43-208ENST00000584437 KNSTRNQ9Y448 316 aa16.93■□□□□ 0.3
RNF43-208ENST00000584437 NPM1P06748 294 aaKnown RBP eCLIP16.91■□□□□ 0.3
RNF43-208ENST00000584437 CHMP4BQ9H444 224 aaKnown RBP16.9■□□□□ 0.3
RNF43-208ENST00000584437 TNIKQ9UKE5 1360 aa16.89■□□□□ 0.29
RNF43-208ENST00000584437 MS4A1P11836 297 aa16.88■□□□□ 0.29
RNF43-208ENST00000584437 RGS3P49796 1198 aa16.88■□□□□ 0.29
RNF43-208ENST00000584437 CCER2I3L3R5 266 aa16.88■□□□□ 0.29
RNF43-208ENST00000584437 RBM19Q9Y4C8 960 aaKnown RBP16.88■□□□□ 0.29
RNF43-208ENST00000584437 B4GALNT3Q6L9W6 998 aa16.87■□□□□ 0.29
RNF43-208ENST00000584437 TIMELESSQ9UNS1 1208 aa16.86■□□□□ 0.29
RNF43-208ENST00000584437 HSP90AB1P08238 724 aaKnown RBP16.85■□□□□ 0.29
RNF43-208ENST00000584437 CARD11Q9BXL7 1154 aa16.85■□□□□ 0.29
RNF43-208ENST00000584437 GOLGA6L6A8MZA4 724 aa16.84■□□□□ 0.29
RNF43-208ENST00000584437 NRDCO43847 1150 aa16.82■□□□□ 0.28
RNF43-208ENST00000584437 CHAF1AQ13111 956 aaPredicted RBP16.81■□□□□ 0.28
RNF43-208ENST00000584437 MSNP26038 577 aaKnown RBP16.8■□□□□ 0.28
RNF43-208ENST00000584437 HSCBQ8IWL3 235 aa16.8■□□□□ 0.28
RNF43-208ENST00000584437 MAPK8IP3Q9UPT6 1336 aa16.79■□□□□ 0.28
RNF43-208ENST00000584437 CEP164Q9UPV0 1460 aa16.79■□□□□ 0.28
RNF43-208ENST00000584437 NUDCQ9Y266 331 aa16.79■□□□□ 0.28
RNF43-208ENST00000584437 PLCB2Q00722 1185 aa16.78■□□□□ 0.28
RNF43-208ENST00000584437 RGL3Q3MIN7 710 aa16.78■□□□□ 0.28
RNF43-208ENST00000584437 SENP3-EIF4A1A0A087X0R7 540 aa16.76■□□□□ 0.27
RNF43-208ENST00000584437 FRAT1Q92837 279 aaPredicted RBP16.76■□□□□ 0.27
RNF43-208ENST00000584437 SIN3AQ96ST3 1273 aa16.75■□□□□ 0.27
RNF43-208ENST00000584437 CFAP44Q96MT7 982 aa16.75■□□□□ 0.27
RNF43-208ENST00000584437 PTMSP20962 102 aa16.74■□□□□ 0.27
RNF43-208ENST00000584437 PLEKHD1A6NEE1 506 aa16.73■□□□□ 0.27
RNF43-208ENST00000584437 NEUROD2Q15784 382 aa16.73■□□□□ 0.27
RNF43-208ENST00000584437 TPRNQ4KMQ1 711 aa16.71■□□□□ 0.27
RNF43-208ENST00000584437 WRNQ14191 1432 aaPredicted RBP eCLIP16.71■□□□□ 0.26
RNF43-208ENST00000584437 PNNQ9H307 717 aaKnown RBP16.7■□□□□ 0.26
RNF43-208ENST00000584437 CFDP1Q9UEE9 299 aaPredicted RBP16.69■□□□□ 0.26
RNF43-208ENST00000584437 TCERG1O14776 1098 aaKnown RBP16.69■□□□□ 0.26
RNF43-208ENST00000584437 CCNB3Q8WWL7 1395 aa16.69■□□□□ 0.26
RNF43-208ENST00000584437 CHMP7Q8WUX9 453 aaPredicted RBP16.68■□□□□ 0.26
RNF43-208ENST00000584437 PPP1R15AO75807 674 aaPredicted RBP16.68■□□□□ 0.26
RNF43-208ENST00000584437 GOLGA6L4A6NEF3 574 aa16.68■□□□□ 0.26
RNF43-208ENST00000584437 KIF27Q86VH2 1401 aa16.67■□□□□ 0.26
RNF43-208ENST00000584437 TSHZ2Q9NRE2 1034 aa16.66■□□□□ 0.26
RNF43-208ENST00000584437 GBP4Q96PP9 640 aa16.66■□□□□ 0.26
RNF43-208ENST00000584437 MCCP23508 829 aa16.65■□□□□ 0.26
RNF43-208ENST00000584437 CC2D1BQ5T0F9 858 aaKnown RBP16.64■□□□□ 0.26
RNF43-208ENST00000584437 TMF1P82094 1093 aa16.64■□□□□ 0.25
RNF43-208ENST00000584437 FGD1P98174 961 aa16.63■□□□□ 0.25
RNF43-208ENST00000584437 PLPPR3Q6T4P5 718 aa16.63■□□□□ 0.25
RNF43-208ENST00000584437 C14orf37Q86TY3 774 aa16.62■□□□□ 0.25
RNF43-208ENST00000584437 KCNJ4P48050 445 aa16.62■□□□□ 0.25
RNF43-208ENST00000584437 IPO9Q96P70 1041 aaKnown RBP16.6■□□□□ 0.25
RNF43-208ENST00000584437 ZBTB7CA1YPR0 619 aa16.6■□□□□ 0.25
RNF43-208ENST00000584437 KIAA2012Q0VF49 1180 aa16.6■□□□□ 0.25
RNF43-208ENST00000584437 FHAD1B1AJZ9 1412 aa16.59■□□□□ 0.25
RNF43-208ENST00000584437 OS9Q13438 667 aaPredicted RBP16.59■□□□□ 0.25
RNF43-208ENST00000584437 HAP1P54257 671 aaPredicted RBP16.58■□□□□ 0.25
RNF43-208ENST00000584437 DRC7Q8IY82 874 aa16.58■□□□□ 0.24
RNF43-208ENST00000584437 RCAN3Q9UKA8 241 aa16.57■□□□□ 0.24
RNF43-208ENST00000584437 SETD5Q9C0A6 1442 aa16.57■□□□□ 0.24
RNF43-208ENST00000584437 U2SURPO15042 1029 aaKnown RBP16.56■□□□□ 0.24
RNF43-208ENST00000584437 HSPA5P11021 654 aaKnown RBP16.56■□□□□ 0.24
RNF43-208ENST00000584437 GOLGA6L3A6NEY3 463 aa16.55■□□□□ 0.24
RNF43-208ENST00000584437 SPRYD3Q8NCJ5 442 aa16.55■□□□□ 0.24
RNF43-208ENST00000584437 KTN1Q86UP2 1357 aaKnown RBP16.55■□□□□ 0.24
RNF43-208ENST00000584437 KCNH8Q96L42 1107 aa16.54■□□□□ 0.24
RNF43-208ENST00000584437 IPO8O15397 1037 aaKnown RBP16.54■□□□□ 0.24
RNF43-208ENST00000584437 SYAP1Q96A49 352 aaPredicted RBP16.54■□□□□ 0.24
RNF43-208ENST00000584437 RWDD1Q9H446 243 aaPredicted RBP16.54■□□□□ 0.24
RNF43-208ENST00000584437 USP35Q9P2H5 1018 aa16.54■□□□□ 0.24
RNF43-208ENST00000584437 A0A0G2JS52 829 aa16.53■□□□□ 0.24
RNF43-208ENST00000584437 POGKQ9P215 609 aa16.52■□□□□ 0.24
RNF43-208ENST00000584437 RALBP1Q15311 655 aa16.52■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms