RNA–Protein interactions for RNA: ENST00000543445.5

LDHA-221, Transcript of lactate dehydrogenase A, humanhuman

TSL 3

Gene LDHA, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-221ENST00000543445 SPDYE6P0CI01 402 aa11.51□□□□□ -0.57
LDHA-221ENST00000543445 SPDYE2Q495Y8 402 aa11.51□□□□□ -0.57
LDHA-221ENST00000543445 TSHZ2Q9NRE2 1034 aa11.48□□□□□ -0.57
LDHA-221ENST00000543445 ATAD2BQ9ULI0 1458 aa11.47□□□□□ -0.57
LDHA-221ENST00000543445 CIZ1Q9ULV3 898 aaPredicted RBP11.47□□□□□ -0.57
LDHA-221ENST00000543445 SSUH2Q9Y2M2 353 aa11.47□□□□□ -0.57
LDHA-221ENST00000543445 PLEKHG5O94827 1062 aa11.46□□□□□ -0.57
LDHA-221ENST00000543445 CHGAP10645 457 aaKnown RBP11.46□□□□□ -0.57
LDHA-221ENST00000543445 DNAJC5Q9H3Z4 198 aa11.45□□□□□ -0.58
LDHA-221ENST00000543445 OSCARQ8IYS5 282 aa11.44□□□□□ -0.58
LDHA-221ENST00000543445 ZBTB47Q9UFB7 747 aaPredicted RBP11.44□□□□□ -0.58
LDHA-221ENST00000543445 SMARCA4P51532 1647 aa11.42□□□□□ -0.58
LDHA-221ENST00000543445 HMGXB3Q12766 1538 aa11.4□□□□□ -0.59
LDHA-221ENST00000543445 SMARCA2P51531 1590 aa11.39□□□□□ -0.59
LDHA-221ENST00000543445 TRIM41Q8WV44 630 aa11.38□□□□□ -0.59
LDHA-221ENST00000543445 CUX2O14529 1486 aa11.38□□□□□ -0.59
LDHA-221ENST00000543445 DSG3P32926 999 aa11.37□□□□□ -0.59
LDHA-221ENST00000543445 ERCC6Q03468 1493 aa11.37□□□□□ -0.59
LDHA-221ENST00000543445 NESP48681 1621 aa11.36□□□□□ -0.59
LDHA-221ENST00000543445 BAZ1AQ9NRL2 1556 aaPredicted RBP11.35□□□□□ -0.59
LDHA-221ENST00000543445 NBR1Q14596 966 aa11.34□□□□□ -0.59
LDHA-221ENST00000543445 PEG3Q9GZU2 1588 aa11.33□□□□□ -0.6
LDHA-221ENST00000543445 BAZ1BQ9UIG0 1483 aaKnown RBP11.32□□□□□ -0.6
LDHA-221ENST00000543445 MROH2BQ7Z745 1585 aa11.31□□□□□ -0.6
LDHA-221ENST00000543445 CACNB1Q02641 598 aaPredicted RBP11.3□□□□□ -0.6
LDHA-221ENST00000543445 HS6ST3Q8IZP7 471 aa11.3□□□□□ -0.6
LDHA-221ENST00000543445 GSE1Q14687 1217 aa11.26□□□□□ -0.61
LDHA-221ENST00000543445 THOC2Q8NI27 1593 aaKnown RBP11.24□□□□□ -0.61
LDHA-221ENST00000543445 LAMC3Q9Y6N6 1575 aa11.22□□□□□ -0.61
LDHA-221ENST00000543445 RNF25Q96BH1 459 aaPredicted RBP11.17□□□□□ -0.62
LDHA-221ENST00000543445 KIF21AQ7Z4S6 1674 aa11.15□□□□□ -0.62
LDHA-221ENST00000543445 DCAF8Q5TAQ9 597 aa11.15□□□□□ -0.62
LDHA-221ENST00000543445 PDS5BQ9NTI5 1447 aa11.15□□□□□ -0.62
LDHA-221ENST00000543445 CADPSQ9ULU8 1353 aa11.15□□□□□ -0.63
LDHA-221ENST00000543445 WIZO95785 1651 aa11.14□□□□□ -0.63
LDHA-221ENST00000543445 RIOK3O14730 519 aaKnown RBP11.14□□□□□ -0.63
LDHA-221ENST00000543445 NUBP1P53384 320 aa11.12□□□□□ -0.63
LDHA-221ENST00000543445 NKX1-1Q15270 411 aaPredicted RBP11.12□□□□□ -0.63
LDHA-221ENST00000543445 GTPBP6O43824 516 aaPredicted RBP11.1□□□□□ -0.63
LDHA-221ENST00000543445 MRC2Q9UBG0 1479 aa11.08□□□□□ -0.64
LDHA-221ENST00000543445 STK25O00506 426 aa11.08□□□□□ -0.64
LDHA-221ENST00000543445 VGFO15240 615 aaPredicted RBP11.07□□□□□ -0.64
LDHA-221ENST00000543445 WDR62O43379 1518 aa11.07□□□□□ -0.64
LDHA-221ENST00000543445 RSF1Q96T23 1441 aaPredicted RBP11.06□□□□□ -0.64
LDHA-221ENST00000543445 FAM212AQ96EL1 285 aa11.05□□□□□ -0.64
LDHA-221ENST00000543445 CFTRP13569 1480 aa11.02□□□□□ -0.65
LDHA-221ENST00000543445 FANCD2Q9BXW9 1451 aa11.02□□□□□ -0.65
LDHA-221ENST00000543445 CEP164Q9UPV0 1460 aa11.02□□□□□ -0.65
LDHA-221ENST00000543445 RYDENQ9NUL5 291 aaKnown RBP11.02□□□□□ -0.65
LDHA-221ENST00000543445 TOP2AP11388 1531 aaKnown RBP10.99□□□□□ -0.65
LDHA-221ENST00000543445 CHRM1P11229 460 aaPredicted RBP10.99□□□□□ -0.65
LDHA-221ENST00000543445 GTF3C3Q9Y5Q9 886 aa10.99□□□□□ -0.65
LDHA-221ENST00000543445 SPDYE1Q8NFV5 336 aaPredicted RBP10.98□□□□□ -0.65
LDHA-221ENST00000543445 TULP1O00294 542 aaPredicted RBP10.97□□□□□ -0.65
LDHA-221ENST00000543445 SGIP1Q9BQI5 828 aa10.97□□□□□ -0.65
LDHA-221ENST00000543445 STK24Q9Y6E0 443 aa10.97□□□□□ -0.65
LDHA-221ENST00000543445 BCL11BQ9C0K0 894 aaPredicted RBP10.96□□□□□ -0.65
LDHA-221ENST00000543445 TIMELESSQ9UNS1 1208 aa10.96□□□□□ -0.65
LDHA-221ENST00000543445 URB2Q14146 1524 aaKnown RBP10.95□□□□□ -0.66
LDHA-221ENST00000543445 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.93□□□□□ -0.66
LDHA-221ENST00000543445 PRR29P0C7W0 189 aa10.93□□□□□ -0.66
LDHA-221ENST00000543445 ERICH6Q7L0X2 663 aa10.93□□□□□ -0.66
LDHA-221ENST00000543445 ZFP91Q96JP5 570 aaPredicted RBP10.93□□□□□ -0.66
LDHA-221ENST00000543445 CREBZFQ9NS37 354 aa10.93□□□□□ -0.66
LDHA-221ENST00000543445 P3H3Q8IVL6 736 aa10.92□□□□□ -0.66
LDHA-221ENST00000543445 CLEC11AQ9Y240 323 aa10.92□□□□□ -0.66
LDHA-221ENST00000543445 CCDC88BA6NC98 1476 aa10.89□□□□□ -0.67
LDHA-221ENST00000543445 MNX1P50219 401 aaPredicted RBP10.89□□□□□ -0.67
LDHA-221ENST00000543445 RASEFQ8IZ41 740 aa10.89□□□□□ -0.67
LDHA-221ENST00000543445 TMEM132AQ24JP5 1023 aa10.88□□□□□ -0.67
LDHA-221ENST00000543445 AKT1S1Q96B36 256 aa10.87□□□□□ -0.67
LDHA-221ENST00000543445 PYGBP11216 843 aa10.86□□□□□ -0.67
LDHA-221ENST00000543445 WDR70Q9NW82 654 aa10.86□□□□□ -0.67
LDHA-221ENST00000543445 RBM42Q9BTD8 480 aaKnown RBP10.84□□□□□ -0.67
LDHA-221ENST00000543445 ZNF608Q9ULD9 1512 aaPredicted RBP10.84□□□□□ -0.67
LDHA-221ENST00000543445 TOPBP1Q92547 1522 aa10.81□□□□□ -0.68
LDHA-221ENST00000543445 PRDM2Q13029 1718 aa10.81□□□□□ -0.68
LDHA-221ENST00000543445 IFT140Q96RY7 1462 aa10.81□□□□□ -0.68
LDHA-221ENST00000543445 LMOD2Q6P5Q4 547 aa10.76□□□□□ -0.69
LDHA-221ENST00000543445 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.76□□□□□ -0.69
LDHA-221ENST00000543445 REM2Q8IYK8 340 aaPredicted RBP10.75□□□□□ -0.69
LDHA-221ENST00000543445 KCNV2Q8TDN2 545 aa10.75□□□□□ -0.69
LDHA-221ENST00000543445 DNMBPQ6XZF7 1577 aa10.74□□□□□ -0.69
LDHA-221ENST00000543445 ZNF467Q7Z7K2 595 aaPredicted RBP10.74□□□□□ -0.69
LDHA-221ENST00000543445 EIF4G3O43432 1585 aaKnown RBP10.73□□□□□ -0.69
LDHA-221ENST00000543445 ABCC8Q09428 1581 aa10.73□□□□□ -0.69
LDHA-221ENST00000543445 RIMBP3CA6NJZ7 1639 aa10.73□□□□□ -0.69
LDHA-221ENST00000543445 RIMBP3BA6NNM3 1639 aa10.73□□□□□ -0.69
LDHA-221ENST00000543445 TARBP1Q13395 1621 aaKnown RBP10.73□□□□□ -0.69
LDHA-221ENST00000543445 RIMBP3Q9UFD9 1639 aa10.73□□□□□ -0.69
LDHA-221ENST00000543445 CADPS2Q86UW7 1296 aa10.72□□□□□ -0.69
LDHA-221ENST00000543445 ARXQ96QS3 562 aa10.72□□□□□ -0.69
LDHA-221ENST00000543445 AQRO60306 1485 aaKnown RBP eCLIP10.72□□□□□ -0.694e-11■■■■□ 22
LDHA-221ENST00000543445 ARHGEF11O15085 1522 aa10.7□□□□□ -0.7
LDHA-221ENST00000543445 POLA1P09884 1462 aaPredicted RBP10.7□□□□□ -0.7
LDHA-221ENST00000543445 C14orf37Q86TY3 774 aa10.7□□□□□ -0.7
LDHA-221ENST00000543445 PDAP1Q13442 181 aaKnown RBP10.69□□□□□ -0.7
LDHA-221ENST00000543445 RAD54L2Q9Y4B4 1467 aa10.68□□□□□ -0.7
LDHA-221ENST00000543445 TSPYL2Q9H2G4 693 aaPredicted RBP10.66□□□□□ -0.7
LDHA-221ENST00000543445 TDRD9Q8NDG6 1382 aaKnown RBP10.65□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms