RNA–Protein interactions for RNA: ENST00000496424.2

LRMDA-208, Transcript of leucine rich melanocyte differentiation associated, humanhuman

TSL 2 BASIC

Gene LRMDA, Length 3,923 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRMDA-208ENST00000496424 FBXO3Q9UK99 471 aa9.45□□□□□ -0.9
LRMDA-208ENST00000496424 FANCIQ9NVI1 1328 aa9.45□□□□□ -0.9
LRMDA-208ENST00000496424 RSPH4AQ5TD94 716 aa9.43□□□□□ -0.9
LRMDA-208ENST00000496424 HSP90AA1P07900 732 aaKnown RBP9.43□□□□□ -0.9
LRMDA-208ENST00000496424 IRX6P78412 446 aaPredicted RBP9.43□□□□□ -0.9
LRMDA-208ENST00000496424 SAMD1Q6SPF0 538 aaPredicted RBP9.43□□□□□ -0.9
LRMDA-208ENST00000496424 CHMP4BQ9H444 224 aaKnown RBP9.42□□□□□ -0.9
LRMDA-208ENST00000496424 LOC105371045A0A1W2PR82 267 aa9.41□□□□□ -0.9
LRMDA-208ENST00000496424 BCCIPQ9P287 314 aaKnown RBP eCLIP9.41□□□□□ -0.9
LRMDA-208ENST00000496424 NEFMP07197 916 aa9.41□□□□□ -0.9
LRMDA-208ENST00000496424 MSH5O43196 834 aa9.4□□□□□ -0.9
LRMDA-208ENST00000496424 FKBP8Q14318 412 aa9.4□□□□□ -0.9
LRMDA-208ENST00000496424 NOP58Q9Y2X3 529 aaKnown RBP9.39□□□□□ -0.91
LRMDA-208ENST00000496424 RRP9O43818 475 aaKnown RBP9.38□□□□□ -0.91
LRMDA-208ENST00000496424 MIER1Q8N108 512 aa9.37□□□□□ -0.91
LRMDA-208ENST00000496424 ABCC9O60706 1549 aa9.35□□□□□ -0.91
LRMDA-208ENST00000496424 IPO4Q8TEX9 1081 aaKnown RBP9.35□□□□□ -0.91
LRMDA-208ENST00000496424 CCDC9Q9Y3X0 531 aaKnown RBP9.35□□□□□ -0.91
LRMDA-208ENST00000496424 CNKSR2Q8WXI2 1034 aa9.34□□□□□ -0.91
LRMDA-208ENST00000496424 ANP32AP39687 249 aaKnown RBP9.32□□□□□ -0.92
LRMDA-208ENST00000496424 TNNT2P45379 298 aaPredicted RBP9.32□□□□□ -0.92
LRMDA-208ENST00000496424 SUPT5HO00267 1087 aaKnown RBP9.31□□□□□ -0.92
LRMDA-208ENST00000496424 HMGB1P09429 215 aaKnown RBP9.31□□□□□ -0.92
LRMDA-208ENST00000496424 ZFP91Q96JP5 570 aaPredicted RBP9.31□□□□□ -0.92
LRMDA-208ENST00000496424 ZBTB47Q9UFB7 747 aaPredicted RBP9.31□□□□□ -0.92
LRMDA-208ENST00000496424 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.3□□□□□ -0.92
LRMDA-208ENST00000496424 ITGAEP38570 1179 aa9.3□□□□□ -0.92
LRMDA-208ENST00000496424 PTMSP20962 102 aa9.29□□□□□ -0.92
LRMDA-208ENST00000496424 FTSJ3Q8IY81 847 aaKnown RBP9.29□□□□□ -0.92
LRMDA-208ENST00000496424 TRIM41Q8WV44 630 aa9.28□□□□□ -0.92
LRMDA-208ENST00000496424 NACADO15069 1562 aa9.27□□□□□ -0.92
LRMDA-208ENST00000496424 UNC13AQ9UPW8 1703 aa9.27□□□□□ -0.93
LRMDA-208ENST00000496424 USP35Q9P2H5 1018 aa9.26□□□□□ -0.93
LRMDA-208ENST00000496424 APPP05067 770 aa9.26□□□□□ -0.93
LRMDA-208ENST00000496424 WWC1Q8IX03 1113 aa9.26□□□□□ -0.93
LRMDA-208ENST00000496424 PATL2C9JE40 543 aaKnown RBP9.25□□□□□ -0.93
LRMDA-208ENST00000496424 PPM1GO15355 546 aaPredicted RBP9.25□□□□□ -0.93
LRMDA-208ENST00000496424 KCNA4P22459 653 aa9.25□□□□□ -0.93
LRMDA-208ENST00000496424 CNPY4Q8N129 248 aa9.24□□□□□ -0.93
LRMDA-208ENST00000496424 FAM43AQ8N2R8 423 aa9.23□□□□□ -0.93
LRMDA-208ENST00000496424 CFAP44Q96MT7 982 aa9.23□□□□□ -0.93
LRMDA-208ENST00000496424 BRPF3Q9ULD4 1205 aa9.23□□□□□ -0.93
LRMDA-208ENST00000496424 PTMAP06454 111 aaKnown RBP9.23□□□□□ -0.93
LRMDA-208ENST00000496424 TEX2Q8IWB9 1127 aa9.23□□□□□ -0.93
LRMDA-208ENST00000496424 ARID4BQ4LE39 1312 aaPredicted RBP9.22□□□□□ -0.93
LRMDA-208ENST00000496424 PLCD3Q8N3E9 789 aa9.22□□□□□ -0.93
LRMDA-208ENST00000496424 PNNQ9H307 717 aaKnown RBP9.22□□□□□ -0.93
LRMDA-208ENST00000496424 C11orf95C9JLR9 678 aaPredicted RBP9.22□□□□□ -0.93
LRMDA-208ENST00000496424 RGS3P49796 1198 aa9.22□□□□□ -0.93
LRMDA-208ENST00000496424 PRDM10Q9NQV6 1147 aa9.21□□□□□ -0.94
LRMDA-208ENST00000496424 SECISBP2LQ93073 1101 aaKnown RBP9.2□□□□□ -0.94
LRMDA-208ENST00000496424 ANP32BQ92688 251 aaKnown RBP9.2□□□□□ -0.94
LRMDA-208ENST00000496424 CALD1Q05682 793 aaKnown RBP9.19□□□□□ -0.94
LRMDA-208ENST00000496424 DNTTIP2Q5QJE6 756 aaKnown RBP9.16□□□□□ -0.94
LRMDA-208ENST00000496424 RB1CC1Q8TDY2 1594 aa9.15□□□□□ -0.94
LRMDA-208ENST00000496424 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.15□□□□□ -0.94
LRMDA-208ENST00000496424 PLCD4Q9BRC7 762 aa9.15□□□□□ -0.95
LRMDA-208ENST00000496424 GTF2E1P29083 439 aaPredicted RBP9.14□□□□□ -0.95
LRMDA-208ENST00000496424 FAM193AP78312 1265 aa9.14□□□□□ -0.95
LRMDA-208ENST00000496424 TRIM44Q96DX7 344 aaPredicted RBP9.14□□□□□ -0.95
LRMDA-208ENST00000496424 IRX3P78415 501 aaPredicted RBP9.13□□□□□ -0.95
LRMDA-208ENST00000496424 ZNF526Q8TF50 670 aaPredicted RBP9.13□□□□□ -0.95
LRMDA-208ENST00000496424 STAC3Q96MF2 364 aa9.13□□□□□ -0.95
LRMDA-208ENST00000496424 CLGNO14967 610 aa9.12□□□□□ -0.95
LRMDA-208ENST00000496424 GSE1Q14687 1217 aa9.12□□□□□ -0.95
LRMDA-208ENST00000496424 CLSTN1O94985 981 aa9.12□□□□□ -0.95
LRMDA-208ENST00000496424 ZNF592Q92610 1267 aa9.11□□□□□ -0.95
LRMDA-208ENST00000496424 TICAM2Q86XR7 235 aa9.1□□□□□ -0.95
LRMDA-208ENST00000496424 PDCL3Q9H2J4 239 aa9.1□□□□□ -0.95
LRMDA-208ENST00000496424 BICRAQ9NZM4 1560 aa9.1□□□□□ -0.95
LRMDA-208ENST00000496424 PSMD1Q99460 953 aa9.1□□□□□ -0.95
LRMDA-208ENST00000496424 TMEM132AQ24JP5 1023 aa9.09□□□□□ -0.95
LRMDA-208ENST00000496424 LAS1LQ9Y4W2 734 aaKnown RBP9.09□□□□□ -0.95
LRMDA-208ENST00000496424 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.08□□□□□ -0.96
LRMDA-208ENST00000496424 IPO9Q96P70 1041 aaKnown RBP9.08□□□□□ -0.96
LRMDA-208ENST00000496424 PAK3O75914 559 aaPredicted RBP9.06□□□□□ -0.96
LRMDA-208ENST00000496424 UBTFP17480 764 aaKnown RBP9.06□□□□□ -0.96
LRMDA-208ENST00000496424 VGLL3A8MV65 326 aa9.05□□□□□ -0.96
LRMDA-208ENST00000496424 OS9Q13438 667 aaPredicted RBP9.05□□□□□ -0.96
LRMDA-208ENST00000496424 MAPK8IP2Q13387 824 aaPredicted RBP9.05□□□□□ -0.96
LRMDA-208ENST00000496424 ZHX1Q9UKY1 873 aaPredicted RBP9.04□□□□□ -0.96
LRMDA-208ENST00000496424 HDAC5Q9UQL6 1122 aa9.04□□□□□ -0.96
LRMDA-208ENST00000496424 MAP7D2Q96T17 732 aa9.03□□□□□ -0.96
LRMDA-208ENST00000496424 WASHC2CQ9Y4E1 1318 aa9.03□□□□□ -0.96
LRMDA-208ENST00000496424 CC2D1BQ5T0F9 858 aaKnown RBP9.02□□□□□ -0.97
LRMDA-208ENST00000496424 ZNF622Q969S3 477 aaKnown RBP eCLIP9.02□□□□□ -0.97
LRMDA-208ENST00000496424 AXDND1Q5T1B0 1012 aaPredicted RBP9.01□□□□□ -0.97
LRMDA-208ENST00000496424 TPM2P07951 284 aa9.01□□□□□ -0.97
LRMDA-208ENST00000496424 SCRIBQ14160 1630 aa9□□□□□ -0.97
LRMDA-208ENST00000496424 WASHC2AQ641Q2 1341 aa9□□□□□ -0.97
LRMDA-208ENST00000496424 IGSF3O75054 1194 aa8.99□□□□□ -0.97
LRMDA-208ENST00000496424 E9PSI1 815 aa8.99□□□□□ -0.97
LRMDA-208ENST00000496424 PRDM4Q9UKN5 801 aa8.99□□□□□ -0.97
LRMDA-208ENST00000496424 PABPN1Q86U42 306 aaKnown RBP eCLIP8.99□□□□□ -0.97
LRMDA-208ENST00000496424 L1TD1Q5T7N2 865 aaKnown RBP8.98□□□□□ -0.97
LRMDA-208ENST00000496424 TAF3Q5VWG9 929 aa8.98□□□□□ -0.97
LRMDA-208ENST00000496424 CENPJQ9HC77 1338 aaPredicted RBP8.97□□□□□ -0.97
LRMDA-208ENST00000496424 AEBP1Q8IUX7 1158 aa8.97□□□□□ -0.97
LRMDA-208ENST00000496424 MCCP23508 829 aa8.97□□□□□ -0.97
LRMDA-208ENST00000496424 SMAP1Q8IYB5 467 aaPredicted RBP8.96□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms