RNA–Protein interactions for RNA: ENST00000481708.1

SMC6-208, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 2

Gene SMC6, Length 3,897 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-208ENST00000481708 VASPP50552 380 aaPredicted RBP6.43□□□□□ -1.38
SMC6-208ENST00000481708 NPM1P06748 294 aaKnown RBP eCLIP6.42□□□□□ -1.38
SMC6-208ENST00000481708 GTF3C3Q9Y5Q9 886 aa6.42□□□□□ -1.38
SMC6-208ENST00000481708 DNAJC5Q9H3Z4 198 aa6.41□□□□□ -1.38
SMC6-208ENST00000481708 IFNLR1Q8IU57 520 aaPredicted RBP6.41□□□□□ -1.38
SMC6-208ENST00000481708 DSG3P32926 999 aa6.4□□□□□ -1.38
SMC6-208ENST00000481708 BAZ1BQ9UIG0 1483 aaKnown RBP6.38□□□□□ -1.39
SMC6-208ENST00000481708 ZBTB12Q9Y330 459 aaPredicted RBP6.37□□□□□ -1.39
SMC6-208ENST00000481708 NESP48681 1621 aa6.35□□□□□ -1.39
SMC6-208ENST00000481708 TOP2AP11388 1531 aaKnown RBP6.35□□□□□ -1.39
SMC6-208ENST00000481708 RIMBP3CA6NJZ7 1639 aa6.35□□□□□ -1.39
SMC6-208ENST00000481708 RIMBP3BA6NNM3 1639 aa6.35□□□□□ -1.39
SMC6-208ENST00000481708 RIMBP3Q9UFD9 1639 aa6.35□□□□□ -1.39
SMC6-208ENST00000481708 OSCARQ8IYS5 282 aa6.34□□□□□ -1.39
SMC6-208ENST00000481708 CFTRP13569 1480 aa6.34□□□□□ -1.39
SMC6-208ENST00000481708 TMEM132AQ24JP5 1023 aa6.33□□□□□ -1.4
SMC6-208ENST00000481708 CHD1O14646 1710 aa6.33□□□□□ -1.4
SMC6-208ENST00000481708 ABCA5Q8WWZ7 1642 aa6.33□□□□□ -1.4
SMC6-208ENST00000481708 MRC2Q9UBG0 1479 aa6.32□□□□□ -1.4
SMC6-208ENST00000481708 KIF13AQ9H1H9 1805 aa6.32□□□□□ -1.4
SMC6-208ENST00000481708 PBRM1Q86U86 1689 aa6.32□□□□□ -1.4
SMC6-208ENST00000481708 TSHZ2Q9NRE2 1034 aa6.31□□□□□ -1.4
SMC6-208ENST00000481708 DCAF8L2P0C7V8 631 aa6.3□□□□□ -1.4
SMC6-208ENST00000481708 BIVM-ERCC5R4GMW8 1640 aa6.3□□□□□ -1.4
SMC6-208ENST00000481708 ZNF692Q9BU19 519 aaPredicted RBP6.3□□□□□ -1.4
SMC6-208ENST00000481708 SSUH2Q9Y2M2 353 aa6.3□□□□□ -1.4
SMC6-208ENST00000481708 EIF4G3O43432 1585 aaKnown RBP6.28□□□□□ -1.4
SMC6-208ENST00000481708 HOMEZQ8IX15 550 aa6.28□□□□□ -1.4
SMC6-208ENST00000481708 SPDYE2BA6NHP3 402 aa6.27□□□□□ -1.41
SMC6-208ENST00000481708 SPDYE6P0CI01 402 aa6.27□□□□□ -1.41
SMC6-208ENST00000481708 SPDYE2Q495Y8 402 aa6.27□□□□□ -1.41
SMC6-208ENST00000481708 PAXIP1Q6ZW49 1069 aaPredicted RBP6.26□□□□□ -1.41
SMC6-208ENST00000481708 MROH2BQ7Z745 1585 aa6.26□□□□□ -1.41
SMC6-208ENST00000481708 DNMBPQ6XZF7 1577 aa6.26□□□□□ -1.41
SMC6-208ENST00000481708 PABPN1Q86U42 306 aaKnown RBP eCLIP6.25□□□□□ -1.41
SMC6-208ENST00000481708 WIZO95785 1651 aa6.25□□□□□ -1.41
SMC6-208ENST00000481708 PPRC1Q5VV67 1664 aaKnown RBP6.24□□□□□ -1.41
SMC6-208ENST00000481708 URB2Q14146 1524 aaKnown RBP6.24□□□□□ -1.41
SMC6-208ENST00000481708 CFAP44Q96MT7 982 aa6.23□□□□□ -1.41
SMC6-208ENST00000481708 KLHL34Q8N239 644 aa6.22□□□□□ -1.41
SMC6-208ENST00000481708 RSF1Q96T23 1441 aaPredicted RBP6.2□□□□□ -1.42
SMC6-208ENST00000481708 BBXQ8WY36 941 aaPredicted RBP6.2□□□□□ -1.42
SMC6-208ENST00000481708 STAG3Q9UJ98 1225 aa6.2□□□□□ -1.42
SMC6-208ENST00000481708 SPOCK2Q92563 424 aa6.2□□□□□ -1.42
SMC6-208ENST00000481708 ABCC8Q09428 1581 aa6.19□□□□□ -1.42
SMC6-208ENST00000481708 PODXL2Q9NZ53 605 aa6.19□□□□□ -1.42
SMC6-208ENST00000481708 CACNB1Q02641 598 aaPredicted RBP6.18□□□□□ -1.42
SMC6-208ENST00000481708 PLCD3Q8N3E9 789 aa6.17□□□□□ -1.42
SMC6-208ENST00000481708 MIER1Q8N108 512 aa6.16□□□□□ -1.42
SMC6-208ENST00000481708 RGL2O15211 777 aa6.16□□□□□ -1.42
SMC6-208ENST00000481708 SUPT5HO00267 1087 aaKnown RBP6.15□□□□□ -1.42
SMC6-208ENST00000481708 IFT140Q96RY7 1462 aa6.14□□□□□ -1.43
SMC6-208ENST00000481708 ECM2O94769 699 aaPredicted RBP6.14□□□□□ -1.43
SMC6-208ENST00000481708 UBTFP17480 764 aaKnown RBP6.14□□□□□ -1.43
SMC6-208ENST00000481708 C14orf37Q86TY3 774 aa6.14□□□□□ -1.43
SMC6-208ENST00000481708 GLI2P10070 1586 aa6.13□□□□□ -1.43
SMC6-208ENST00000481708 HRCP23327 699 aa6.13□□□□□ -1.43
SMC6-208ENST00000481708 MAPKBP1O60336 1514 aa6.12□□□□□ -1.43
SMC6-208ENST00000481708 PDS5BQ9NTI5 1447 aa6.12□□□□□ -1.43
SMC6-208ENST00000481708 CADPSQ9ULU8 1353 aa6.12□□□□□ -1.43
SMC6-208ENST00000481708 TRIM26Q12899 539 aaPredicted RBP6.12□□□□□ -1.43
SMC6-208ENST00000481708 ADAMTS12P58397 1594 aa6.11□□□□□ -1.43
SMC6-208ENST00000481708 ARHGEF11O15085 1522 aa6.11□□□□□ -1.43
SMC6-208ENST00000481708 MAP3K4Q9Y6R4 1608 aa6.1□□□□□ -1.43
SMC6-208ENST00000481708 RUSC2Q8N2Y8 1516 aa6.09□□□□□ -1.44
SMC6-208ENST00000481708 TOPBP1Q92547 1522 aa6.09□□□□□ -1.44
SMC6-208ENST00000481708 CEP164Q9UPV0 1460 aa6.08□□□□□ -1.44
SMC6-208ENST00000481708 ZBTB4Q9P1Z0 1013 aaPredicted RBP6.08□□□□□ -1.44
SMC6-208ENST00000481708 ARAP1Q96P48 1450 aa6.06□□□□□ -1.44
SMC6-208ENST00000481708 MAGI1Q96QZ7 1491 aaPredicted RBP6.06□□□□□ -1.44
SMC6-208ENST00000481708 SPRYD3Q8NCJ5 442 aa6.06□□□□□ -1.44
SMC6-208ENST00000481708 CIZ1Q9ULV3 898 aaPredicted RBP6.06□□□□□ -1.44
SMC6-208ENST00000481708 FANCD2Q9BXW9 1451 aa6.05□□□□□ -1.44
SMC6-208ENST00000481708 TOP2BQ02880 1626 aa6.05□□□□□ -1.44
SMC6-208ENST00000481708 RNF25Q96BH1 459 aaPredicted RBP6.05□□□□□ -1.44
SMC6-208ENST00000481708 NBR1Q14596 966 aa6.04□□□□□ -1.44
SMC6-208ENST00000481708 ZBTB47Q9UFB7 747 aaPredicted RBP6.03□□□□□ -1.44
SMC6-208ENST00000481708 ERICH3Q5RHP9 1530 aa6.03□□□□□ -1.44
SMC6-208ENST00000481708 NUBP1P53384 320 aa6.03□□□□□ -1.44
SMC6-208ENST00000481708 ABCA10Q8WWZ4 1543 aa6.03□□□□□ -1.44
SMC6-208ENST00000481708 MNX1P50219 401 aaPredicted RBP6.03□□□□□ -1.44
SMC6-208ENST00000481708 BRPF1P55201 1214 aaPredicted RBP6.02□□□□□ -1.45
SMC6-208ENST00000481708 NUP160Q12769 1436 aa6.02□□□□□ -1.45
SMC6-208ENST00000481708 SYNJ1O43426 1573 aa6.02□□□□□ -1.45
SMC6-208ENST00000481708 CEP170Q5SW79 1584 aa6.02□□□□□ -1.45
SMC6-208ENST00000481708 DIP2BQ9P265 1576 aa6.02□□□□□ -1.45
SMC6-208ENST00000481708 PLEKHG5O94827 1062 aa6.01□□□□□ -1.45
SMC6-208ENST00000481708 AKT1S1Q96B36 256 aa6.01□□□□□ -1.45
SMC6-208ENST00000481708 CREBZFQ9NS37 354 aa6.01□□□□□ -1.45
SMC6-208ENST00000481708 KDM5BQ9UGL1 1544 aa6.01□□□□□ -1.45
SMC6-208ENST00000481708 CHGAP10645 457 aaKnown RBP6□□□□□ -1.45
SMC6-208ENST00000481708 NKX1-1Q15270 411 aaPredicted RBP6□□□□□ -1.45
SMC6-208ENST00000481708 CUL7Q14999 1698 aa6□□□□□ -1.45
SMC6-208ENST00000481708 SPDYE1Q8NFV5 336 aaPredicted RBP6□□□□□ -1.45
SMC6-208ENST00000481708 REM2Q8IYK8 340 aaPredicted RBP6□□□□□ -1.45
SMC6-208ENST00000481708 CLEC11AQ9Y240 323 aa5.99□□□□□ -1.45
SMC6-208ENST00000481708 RBM42Q9BTD8 480 aaKnown RBP5.99□□□□□ -1.45
SMC6-208ENST00000481708 CUX1P39880 1505 aa5.98□□□□□ -1.45
SMC6-208ENST00000481708 ADCY10Q96PN6 1610 aa5.97□□□□□ -1.45
SMC6-208ENST00000481708 NPM2Q86SE8 214 aaKnown RBP5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms