RNA–Protein interactions for RNA: ENST00000395603.7

ATRX-202, Transcript of ATRX, chromatin remodeler, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ATRX, Length 10,218 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-202ENST00000395603 BCL11BQ9C0K0 894 aaPredicted RBP7.07□□□□□ -1.28
ATRX-202ENST00000395603 CHIC1Q5VXU3 224 aa7.07□□□□□ -1.28
ATRX-202ENST00000395603 L1TD1Q5T7N2 865 aaKnown RBP7.06□□□□□ -1.28
ATRX-202ENST00000395603 PNNQ9H307 717 aaKnown RBP7.06□□□□□ -1.28
ATRX-202ENST00000395603 DDRGK1Q96HY6 314 aa7.05□□□□□ -1.28
ATRX-202ENST00000395603 ZBTB47Q9UFB7 747 aaPredicted RBP7.05□□□□□ -1.28
ATRX-202ENST00000395603 PDIA4P13667 645 aaKnown RBP7.05□□□□□ -1.28
ATRX-202ENST00000395603 DHX8Q14562 1220 aaKnown RBP7.05□□□□□ -1.28
ATRX-202ENST00000395603 FMN1Q68DA7 1419 aa7.04□□□□□ -1.28
ATRX-202ENST00000395603 ANP32CO43423 234 aa7.04□□□□□ -1.28
ATRX-202ENST00000395603 SETD5Q9C0A6 1442 aa7.03□□□□□ -1.28
ATRX-202ENST00000395603 PPARGC1BQ86YN6 1023 aaKnown RBP7.02□□□□□ -1.29
ATRX-202ENST00000395603 ZNF316A6NFI3 1004 aaPredicted RBP7.02□□□□□ -1.29
ATRX-202ENST00000395603 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.01□□□□□ -1.29
ATRX-202ENST00000395603 ERICH3Q5RHP9 1530 aa7.01□□□□□ -1.29
ATRX-202ENST00000395603 MAP3K1Q13233 1512 aa7.01□□□□□ -1.29
ATRX-202ENST00000395603 WDR97A6NE52 1622 aa7□□□□□ -1.29
ATRX-202ENST00000395603 TOP2AP11388 1531 aaKnown RBP6.99□□□□□ -1.29
ATRX-202ENST00000395603 NRDCO43847 1150 aa6.99□□□□□ -1.29
ATRX-202ENST00000395603 ISY1Q9ULR0 285 aaKnown RBP6.98□□□□□ -1.29
ATRX-202ENST00000395603 KLHL34Q8N239 644 aa6.98□□□□□ -1.29
ATRX-202ENST00000395603 CUX1P39880 1505 aa6.98□□□□□ -1.29
ATRX-202ENST00000395603 CCER2I3L3R5 266 aa6.97□□□□□ -1.29
ATRX-202ENST00000395603 LAS1LQ9Y4W2 734 aaKnown RBP6.97□□□□□ -1.29
ATRX-202ENST00000395603 PPM1GO15355 546 aaPredicted RBP6.97□□□□□ -1.29
ATRX-202ENST00000395603 DHX37Q8IY37 1157 aaKnown RBP6.97□□□□□ -1.29
ATRX-202ENST00000395603 EFCAB5A4FU69 1503 aa6.97□□□□□ -1.29
ATRX-202ENST00000395603 BECN1Q14457 450 aa6.96□□□□□ -1.3
ATRX-202ENST00000395603 UACAQ9BZF9 1416 aa6.95□□□□□ -1.3
ATRX-202ENST00000395603 GOLGA6L22H0YM25 854 aa6.94□□□□□ -1.3
ATRX-202ENST00000395603 TNNT2P45379 298 aaPredicted RBP6.94□□□□□ -1.3
ATRX-202ENST00000395603 PCGF6Q9BYE7 350 aa6.94□□□□□ -1.3
ATRX-202ENST00000395603 HMGB1P1B2RPK0 211 aaPredicted RBP6.94□□□□□ -1.3
ATRX-202ENST00000395603 WASHC2AQ641Q2 1341 aa6.94□□□□□ -1.3
ATRX-202ENST00000395603 WASHC2CQ9Y4E1 1318 aa6.94□□□□□ -1.3
ATRX-202ENST00000395603 HMGXB3Q12766 1538 aa6.94□□□□□ -1.3
ATRX-202ENST00000395603 IRX6P78412 446 aaPredicted RBP6.94□□□□□ -1.3
ATRX-202ENST00000395603 TONSLQ96HA7 1378 aa6.93□□□□□ -1.3
ATRX-202ENST00000395603 CCNB3Q8WWL7 1395 aa6.93□□□□□ -1.3
ATRX-202ENST00000395603 EIF3AQ14152 1382 aaKnown RBP6.93□□□□□ -1.3
ATRX-202ENST00000395603 CALD1Q05682 793 aaKnown RBP6.93□□□□□ -1.3
ATRX-202ENST00000395603 DIEXFQ68CQ4 756 aaKnown RBP6.92□□□□□ -1.3
ATRX-202ENST00000395603 HDGFP51858 240 aaKnown RBP6.92□□□□□ -1.3
ATRX-202ENST00000395603 PDE3BQ13370 1112 aa6.92□□□□□ -1.3
ATRX-202ENST00000395603 EIF3DO15371 548 aaKnown RBP eCLIP6.91□□□□□ -1.39e-8■■■□□ 14.7
ATRX-202ENST00000395603 THOC2Q8NI27 1593 aaKnown RBP6.91□□□□□ -1.3
ATRX-202ENST00000395603 VPS8Q8N3P4 1428 aa6.91□□□□□ -1.3
ATRX-202ENST00000395603 PDS5BQ9NTI5 1447 aa6.91□□□□□ -1.3
ATRX-202ENST00000395603 CCDC34Q96HJ3 373 aa6.91□□□□□ -1.3
ATRX-202ENST00000395603 HOXA7P31268 230 aaPredicted RBP6.91□□□□□ -1.3
ATRX-202ENST00000395603 ROCK1Q13464 1354 aa6.91□□□□□ -1.3
ATRX-202ENST00000395603 NINLQ9Y2I6 1382 aa6.91□□□□□ -1.3
ATRX-202ENST00000395603 PABPN1Q86U42 306 aaKnown RBP eCLIP6.91□□□□□ -1.3
ATRX-202ENST00000395603 MTERF4Q7Z6M4 381 aaKnown RBP6.9□□□□□ -1.31
ATRX-202ENST00000395603 KIF21BO75037 1637 aa6.9□□□□□ -1.31
ATRX-202ENST00000395603 PLEKHH2Q8IVE3 1493 aa6.9□□□□□ -1.31
ATRX-202ENST00000395603 CARMIL2Q6F5E8 1435 aa6.89□□□□□ -1.31
ATRX-202ENST00000395603 NAP1L2Q9ULW6 460 aaPredicted RBP6.89□□□□□ -1.31
ATRX-202ENST00000395603 GOLGA6L6A8MZA4 724 aa6.89□□□□□ -1.31
ATRX-202ENST00000395603 SCRIBQ14160 1630 aa6.88□□□□□ -1.31
ATRX-202ENST00000395603 PEG3Q9GZU2 1588 aa6.88□□□□□ -1.31
ATRX-202ENST00000395603 ANKRD30AQ9BXX3 1397 aa6.87□□□□□ -1.31
ATRX-202ENST00000395603 EIF4G2P78344 907 aaKnown RBP eCLIP6.87□□□□□ -1.31
ATRX-202ENST00000395603 CCDC144AA2RUR9 1427 aa6.87□□□□□ -1.31
ATRX-202ENST00000395603 DAPK1P53355 1430 aa6.87□□□□□ -1.31
ATRX-202ENST00000395603 CCDC7Q96M83 1385 aa6.86□□□□□ -1.31
ATRX-202ENST00000395603 MIA2Q96PC5 1412 aa6.86□□□□□ -1.31
ATRX-202ENST00000395603 CCDC88BA6NC98 1476 aa6.85□□□□□ -1.31
ATRX-202ENST00000395603 HTATSF1O43719 755 aaKnown RBP6.85□□□□□ -1.31
ATRX-202ENST00000395603 KIF21AQ7Z4S6 1674 aa6.85□□□□□ -1.31
ATRX-202ENST00000395603 CASC1Q6TDU7 716 aa6.84□□□□□ -1.31
ATRX-202ENST00000395603 INSRP06213 1382 aa6.84□□□□□ -1.31
ATRX-202ENST00000395603 AQRO60306 1485 aaKnown RBP eCLIP6.84□□□□□ -1.314e-6■□□□□ 10.6
ATRX-202ENST00000395603 CNTLNQ9NXG0 1405 aa6.84□□□□□ -1.32
ATRX-202ENST00000395603 KANK1Q14678 1352 aa6.83□□□□□ -1.32
ATRX-202ENST00000395603 PODXL2Q9NZ53 605 aa6.83□□□□□ -1.32
ATRX-202ENST00000395603 MYH16Q9H6N6 1097 aa6.83□□□□□ -1.32
ATRX-202ENST00000395603 ZBTB4Q9P1Z0 1013 aaPredicted RBP6.83□□□□□ -1.32
ATRX-202ENST00000395603 MTUS2Q5JR59 1369 aa6.82□□□□□ -1.32
ATRX-202ENST00000395603 CFAP53Q96M91 514 aa6.82□□□□□ -1.32
ATRX-202ENST00000395603 ANKRD30BQ9BXX2 1392 aa6.82□□□□□ -1.32
ATRX-202ENST00000395603 TSPY4P0CV99 314 aa6.81□□□□□ -1.32
ATRX-202ENST00000395603 TSPY10P0CW01 314 aa6.81□□□□□ -1.32
ATRX-202ENST00000395603 KIF16BQ96L93 1317 aa6.81□□□□□ -1.32
ATRX-202ENST00000395603 CSPP1Q1MSJ5 1256 aa6.81□□□□□ -1.32
ATRX-202ENST00000395603 PAXIP1Q6ZW49 1069 aaPredicted RBP6.81□□□□□ -1.32
ATRX-202ENST00000395603 KIF3AQ9Y496 699 aa6.8□□□□□ -1.32
ATRX-202ENST00000395603 CAVIN1Q6NZI2 390 aaKnown RBP6.8□□□□□ -1.32
ATRX-202ENST00000395603 MAP7D2Q96T17 732 aa6.8□□□□□ -1.32
ATRX-202ENST00000395603 CNPY4Q8N129 248 aa6.8□□□□□ -1.32
ATRX-202ENST00000395603 CUL7Q14999 1698 aa6.8□□□□□ -1.32
ATRX-202ENST00000395603 SMARCA4P51532 1647 aa6.79□□□□□ -1.32
ATRX-202ENST00000395603 ARHGAP35Q9NRY4 1499 aa6.79□□□□□ -1.32
ATRX-202ENST00000395603 RALBP1Q15311 655 aa6.79□□□□□ -1.32
ATRX-202ENST00000395603 E9PSI1 815 aa6.79□□□□□ -1.32
ATRX-202ENST00000395603 FAM50AQ14320 339 aaKnown RBP6.79□□□□□ -1.32
ATRX-202ENST00000395603 DHX29Q7Z478 1369 aaKnown RBP6.79□□□□□ -1.32
ATRX-202ENST00000395603 ZNF428Q96B54 188 aa6.78□□□□□ -1.32
ATRX-202ENST00000395603 TULP1O00294 542 aaPredicted RBP6.78□□□□□ -1.32
ATRX-202ENST00000395603 SYAP1Q96A49 352 aaPredicted RBP6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms