RNA–Protein interactions for RNA: ENST00000392393.7

VNN3-203, Transcript of vanin 3, humanhuman

TSL 1 (best) BASIC

Gene VNN3, Length 1,603 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VNN3-203ENST00000392393 STAG3Q9UJ98 1225 aa11.98□□□□□ -0.49
VNN3-203ENST00000392393 MIER1Q8N108 512 aa11.94□□□□□ -0.5
VNN3-203ENST00000392393 POLA2Q14181 598 aa11.93□□□□□ -0.5
VNN3-203ENST00000392393 NEUROD2Q15784 382 aa11.93□□□□□ -0.5
VNN3-203ENST00000392393 TRIM41Q8WV44 630 aa11.88□□□□□ -0.51
VNN3-203ENST00000392393 P3H3Q8IVL6 736 aa11.86□□□□□ -0.51
VNN3-203ENST00000392393 KCNV2Q8TDN2 545 aa11.86□□□□□ -0.51
VNN3-203ENST00000392393 ZC3H15Q8WU90 426 aaKnown RBP11.82□□□□□ -0.52
VNN3-203ENST00000392393 SLC24A3Q9HC58 644 aa11.82□□□□□ -0.52
VNN3-203ENST00000392393 ZMYND15Q9H091 742 aa11.78□□□□□ -0.52
VNN3-203ENST00000392393 SPINK5Q9NQ38 1064 aaPredicted RBP11.77□□□□□ -0.53
VNN3-203ENST00000392393 RIOK3O14730 519 aaKnown RBP11.76□□□□□ -0.53
VNN3-203ENST00000392393 STK25O00506 426 aa11.75□□□□□ -0.53
VNN3-203ENST00000392393 RSPH6AQ9H0K4 717 aa11.73□□□□□ -0.53
VNN3-203ENST00000392393 ARID3AQ99856 593 aa11.72□□□□□ -0.53
VNN3-203ENST00000392393 ZNF692Q9BU19 519 aaPredicted RBP11.72□□□□□ -0.53
VNN3-203ENST00000392393 CADPS2Q86UW7 1296 aa11.71□□□□□ -0.53
VNN3-203ENST00000392393 C1orf115Q9H7X2 142 aa11.71□□□□□ -0.53
VNN3-203ENST00000392393 ZBTB47Q9UFB7 747 aaPredicted RBP11.7□□□□□ -0.54
VNN3-203ENST00000392393 GSE1Q14687 1217 aa11.65□□□□□ -0.54
VNN3-203ENST00000392393 PABPN1Q86U42 306 aaKnown RBP eCLIP11.65□□□□□ -0.54
VNN3-203ENST00000392393 SSUH2Q9Y2M2 353 aa11.65□□□□□ -0.54
VNN3-203ENST00000392393 VGFO15240 615 aaPredicted RBP11.63□□□□□ -0.55
VNN3-203ENST00000392393 WDR70Q9NW82 654 aa11.63□□□□□ -0.55
VNN3-203ENST00000392393 ZBTB12Q9Y330 459 aaPredicted RBP11.63□□□□□ -0.55
VNN3-203ENST00000392393 PLEKHG5O94827 1062 aa11.6□□□□□ -0.55
VNN3-203ENST00000392393 BCL11BQ9C0K0 894 aaPredicted RBP11.6□□□□□ -0.55
VNN3-203ENST00000392393 STK24Q9Y6E0 443 aa11.6□□□□□ -0.55
VNN3-203ENST00000392393 NUBP1P53384 320 aa11.59□□□□□ -0.55
VNN3-203ENST00000392393 RYDENQ9NUL5 291 aaKnown RBP11.59□□□□□ -0.55
VNN3-203ENST00000392393 ZMYND10O75800 440 aa11.58□□□□□ -0.56
VNN3-203ENST00000392393 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.57□□□□□ -0.56
VNN3-203ENST00000392393 ZFP91Q96JP5 570 aaPredicted RBP11.57□□□□□ -0.56
VNN3-203ENST00000392393 GPBP1L1Q9HC44 474 aaPredicted RBP11.57□□□□□ -0.56
VNN3-203ENST00000392393 SEMA3EO15041 775 aa11.56□□□□□ -0.56
VNN3-203ENST00000392393 ARID3CA6NKF2 412 aa11.55□□□□□ -0.56
VNN3-203ENST00000392393 TESPA1A2RU30 521 aaPredicted RBP11.54□□□□□ -0.56
VNN3-203ENST00000392393 NECTIN2Q92692 538 aa11.54□□□□□ -0.56
VNN3-203ENST00000392393 SGIP1Q9BQI5 828 aa11.54□□□□□ -0.56
VNN3-203ENST00000392393 CAPN15O75808 1086 aa11.53□□□□□ -0.56
VNN3-203ENST00000392393 CCDC9Q9Y3X0 531 aaKnown RBP11.53□□□□□ -0.56
VNN3-203ENST00000392393 ABCB7O75027 752 aa11.53□□□□□ -0.56
VNN3-203ENST00000392393 DCAF8Q5TAQ9 597 aa11.53□□□□□ -0.56
VNN3-203ENST00000392393 IL27Q8NEV9 243 aa11.53□□□□□ -0.56
VNN3-203ENST00000392393 SPDYE2BA6NHP3 402 aa11.52□□□□□ -0.57
VNN3-203ENST00000392393 SPDYE6P0CI01 402 aa11.52□□□□□ -0.57
VNN3-203ENST00000392393 SPDYE2Q495Y8 402 aa11.52□□□□□ -0.57
VNN3-203ENST00000392393 OSCARQ8IYS5 282 aa11.51□□□□□ -0.57
VNN3-203ENST00000392393 ARHGEF1Q92888 912 aaKnown RBP11.51□□□□□ -0.57
VNN3-203ENST00000392393 ZBTB7CA1YPR0 619 aa11.48□□□□□ -0.57
VNN3-203ENST00000392393 MKRN3Q13064 507 aaKnown RBP11.47□□□□□ -0.57
VNN3-203ENST00000392393 PDIA4P13667 645 aaKnown RBP11.46□□□□□ -0.57
VNN3-203ENST00000392393 BARGINQ6ZT62 677 aa11.46□□□□□ -0.57
VNN3-203ENST00000392393 APBB1O00213 710 aa11.46□□□□□ -0.58
VNN3-203ENST00000392393 CHRM1P11229 460 aaPredicted RBP11.42□□□□□ -0.58
VNN3-203ENST00000392393 KDM4CQ9H3R0 1056 aa11.42□□□□□ -0.58
VNN3-203ENST00000392393 LOC105371045A0A1W2PR82 267 aa11.39□□□□□ -0.59
VNN3-203ENST00000392393 AK7Q96M32 723 aa11.38□□□□□ -0.59
VNN3-203ENST00000392393 E2F4Q16254 413 aa11.38□□□□□ -0.59
VNN3-203ENST00000392393 FAM212AQ96EL1 285 aa11.34□□□□□ -0.59
VNN3-203ENST00000392393 CCDC82Q8N4S0 544 aa11.31□□□□□ -0.6
VNN3-203ENST00000392393 PDE4DQ08499 809 aa11.28□□□□□ -0.6
VNN3-203ENST00000392393 TRIM66O15016 1216 aa11.27□□□□□ -0.6
VNN3-203ENST00000392393 PYGBP11216 843 aa11.27□□□□□ -0.6
VNN3-203ENST00000392393 RASEFQ8IZ41 740 aa11.27□□□□□ -0.61
VNN3-203ENST00000392393 SMYD5Q6GMV2 418 aa11.26□□□□□ -0.61
VNN3-203ENST00000392393 KCTD17Q8N5Z5 321 aa11.26□□□□□ -0.61
VNN3-203ENST00000392393 FAM117AQ9C073 453 aa11.26□□□□□ -0.61
VNN3-203ENST00000392393 KRI1Q8N9T8 703 aaKnown RBP11.24□□□□□ -0.61
VNN3-203ENST00000392393 PPP1R37O75864 691 aa11.24□□□□□ -0.61
VNN3-203ENST00000392393 RBM26Q5T8P6 1007 aaKnown RBP11.24□□□□□ -0.61
VNN3-203ENST00000392393 MFRPQ9BY79 579 aa11.24□□□□□ -0.61
VNN3-203ENST00000392393 ZNF316A6NFI3 1004 aaPredicted RBP11.22□□□□□ -0.61
VNN3-203ENST00000392393 ONECUT3O60422 494 aaPredicted RBP11.21□□□□□ -0.61
VNN3-203ENST00000392393 MNX1P50219 401 aaPredicted RBP11.21□□□□□ -0.61
VNN3-203ENST00000392393 PLEKHG3A1L390 1219 aa11.2□□□□□ -0.62
VNN3-203ENST00000392393 IGSF3O75054 1194 aa11.2□□□□□ -0.62
VNN3-203ENST00000392393 CLUAP1Q96AJ1 413 aa11.2□□□□□ -0.62
VNN3-203ENST00000392393 FLIIQ13045 1269 aa11.2□□□□□ -0.62
VNN3-203ENST00000392393 RAD21O60216 631 aa11.19□□□□□ -0.62
VNN3-203ENST00000392393 GPIHBP1Q8IV16 184 aa11.19□□□□□ -0.62
VNN3-203ENST00000392393 RGS22Q8NE09 1264 aa11.19□□□□□ -0.62
VNN3-203ENST00000392393 TRAK2O60296 914 aa11.18□□□□□ -0.62
VNN3-203ENST00000392393 TRAIPQ9BWF2 469 aa11.18□□□□□ -0.62
VNN3-203ENST00000392393 A6NJR5 290 aa11.16□□□□□ -0.62
VNN3-203ENST00000392393 RNF39Q9H2S5 420 aa11.16□□□□□ -0.62
VNN3-203ENST00000392393 NCKAP5LQ9HCH0 1330 aa11.15□□□□□ -0.62
VNN3-203ENST00000392393 MLLT3P42568 568 aaPredicted RBP11.14□□□□□ -0.63
VNN3-203ENST00000392393 CREBZFQ9NS37 354 aa11.13□□□□□ -0.63
VNN3-203ENST00000392393 MTMR7Q9Y216 660 aa11.13□□□□□ -0.63
VNN3-203ENST00000392393 ARIH1Q9Y4X5 557 aaPredicted RBP11.12□□□□□ -0.63
VNN3-203ENST00000392393 AEBP1Q8IUX7 1158 aa11.11□□□□□ -0.63
VNN3-203ENST00000392393 ZNF428Q96B54 188 aa11.09□□□□□ -0.63
VNN3-203ENST00000392393 DSG3P32926 999 aa11.09□□□□□ -0.63
VNN3-203ENST00000392393 LARP6Q9BRS8 491 aaKnown RBP11.08□□□□□ -0.64
VNN3-203ENST00000392393 FOXD4L5Q5VV16 416 aaPredicted RBP11.06□□□□□ -0.64
VNN3-203ENST00000392393 FBXO22Q8NEZ5 403 aa11.06□□□□□ -0.64
VNN3-203ENST00000392393 FOXD4L4Q8WXT5 416 aaPredicted RBP11.06□□□□□ -0.64
VNN3-203ENST00000392393 SHROOM4Q9ULL8 1493 aa11.06□□□□□ -0.64
VNN3-203ENST00000392393 MFSD10Q14728 455 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms