RNA–Protein interactions for RNA: ENST00000340994.4

PKHD1-201, Transcript of PKHD1, fibrocystin/polyductin, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PKHD1, Length 11,589 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKHD1-201ENST00000340994 DEKP35659 375 aaKnown RBP10.69□□□□□ -0.7
PKHD1-201ENST00000340994 CFAP44Q96MT7 982 aa10.68□□□□□ -0.7
PKHD1-201ENST00000340994 USP35Q9P2H5 1018 aa10.68□□□□□ -0.7
PKHD1-201ENST00000340994 RSPH6AQ9H0K4 717 aa10.68□□□□□ -0.7
PKHD1-201ENST00000340994 MIER1Q8N108 512 aa10.65□□□□□ -0.7
PKHD1-201ENST00000340994 TNNT3P45378 269 aaPredicted RBP10.65□□□□□ -0.7
PKHD1-201ENST00000340994 PNNQ9H307 717 aaKnown RBP10.63□□□□□ -0.71
PKHD1-201ENST00000340994 MS4A1P11836 297 aa10.63□□□□□ -0.71
PKHD1-201ENST00000340994 KIAA2012Q0VF49 1180 aa10.62□□□□□ -0.71
PKHD1-201ENST00000340994 RTN4Q9NQC3 1192 aaKnown RBP10.62□□□□□ -0.71
PKHD1-201ENST00000340994 HSCBQ8IWL3 235 aa10.61□□□□□ -0.71
PKHD1-201ENST00000340994 CSRNP3Q8WYN3 585 aa10.6□□□□□ -0.71
PKHD1-201ENST00000340994 EEA1Q15075 1411 aa10.6□□□□□ -0.71
PKHD1-201ENST00000340994 EIF4G2P78344 907 aaKnown RBP eCLIP10.6□□□□□ -0.71
PKHD1-201ENST00000340994 FTSJ3Q8IY81 847 aaKnown RBP10.59□□□□□ -0.71
PKHD1-201ENST00000340994 SUPT16HQ9Y5B9 1047 aaKnown RBP10.59□□□□□ -0.71
PKHD1-201ENST00000340994 LAS1LQ9Y4W2 734 aaKnown RBP10.59□□□□□ -0.71
PKHD1-201ENST00000340994 SYAP1Q96A49 352 aaPredicted RBP10.58□□□□□ -0.72
PKHD1-201ENST00000340994 HSP90AB1P08238 724 aaKnown RBP10.58□□□□□ -0.72
PKHD1-201ENST00000340994 GBP4Q96PP9 640 aa10.58□□□□□ -0.72
PKHD1-201ENST00000340994 HSP90AA2PQ14568 343 aaPredicted RBP10.57□□□□□ -0.72
PKHD1-201ENST00000340994 CDCA8Q53HL2 280 aa10.57□□□□□ -0.72
PKHD1-201ENST00000340994 SETQ01105 290 aaPredicted RBP10.56□□□□□ -0.72
PKHD1-201ENST00000340994 GOLGA6L1Q8N7Z2 621 aa10.56□□□□□ -0.72
PKHD1-201ENST00000340994 IRX6P78412 446 aaPredicted RBP10.53□□□□□ -0.72
PKHD1-201ENST00000340994 CLIP1P30622 1438 aa10.53□□□□□ -0.72
PKHD1-201ENST00000340994 GOLGA6L4A6NEF3 574 aa10.53□□□□□ -0.72
PKHD1-201ENST00000340994 CFAP53Q96M91 514 aa10.52□□□□□ -0.72
PKHD1-201ENST00000340994 MCCP23508 829 aa10.52□□□□□ -0.73
PKHD1-201ENST00000340994 PHF14O94880 888 aa10.52□□□□□ -0.73
PKHD1-201ENST00000340994 RSF1Q96T23 1441 aaPredicted RBP10.51□□□□□ -0.73
PKHD1-201ENST00000340994 CALRP27797 417 aaKnown RBP10.51□□□□□ -0.73
PKHD1-201ENST00000340994 DRC7Q8IY82 874 aa10.51□□□□□ -0.73
PKHD1-201ENST00000340994 A0A0U1RQG5 324 aaPredicted RBP10.5□□□□□ -0.73
PKHD1-201ENST00000340994 GOLGA3Q08378 1498 aa10.5□□□□□ -0.73
PKHD1-201ENST00000340994 RBM19Q9Y4C8 960 aaKnown RBP10.5□□□□□ -0.73
PKHD1-201ENST00000340994 GOLGA6L3A6NEY3 463 aa10.49□□□□□ -0.73
PKHD1-201ENST00000340994 CCER2I3L3R5 266 aa10.48□□□□□ -0.73
PKHD1-201ENST00000340994 HTATSF1O43719 755 aaKnown RBP10.48□□□□□ -0.73
PKHD1-201ENST00000340994 SALL2Q9Y467 1007 aaPredicted RBP10.48□□□□□ -0.73
PKHD1-201ENST00000340994 PLCB2Q00722 1185 aa10.46□□□□□ -0.73
PKHD1-201ENST00000340994 MTERF4Q7Z6M4 381 aaKnown RBP10.46□□□□□ -0.73
PKHD1-201ENST00000340994 KNSTRNQ9Y448 316 aa10.46□□□□□ -0.74
PKHD1-201ENST00000340994 TCERG1O14776 1098 aaKnown RBP10.46□□□□□ -0.74
PKHD1-201ENST00000340994 MTUS2Q5JR59 1369 aa10.46□□□□□ -0.74
PKHD1-201ENST00000340994 SCRIBQ14160 1630 aa10.46□□□□□ -0.74
PKHD1-201ENST00000340994 CSPP1Q1MSJ5 1256 aa10.45□□□□□ -0.74
PKHD1-201ENST00000340994 NOC3LQ8WTT2 800 aaKnown RBP10.44□□□□□ -0.74
PKHD1-201ENST00000340994 TPM4P67936 248 aa10.44□□□□□ -0.74
PKHD1-201ENST00000340994 DDX11L8A8MPP1 907 aa10.44□□□□□ -0.74
PKHD1-201ENST00000340994 ESF1Q9H501 851 aaKnown RBP10.44□□□□□ -0.74
PKHD1-201ENST00000340994 IPO9Q96P70 1041 aaKnown RBP10.43□□□□□ -0.74
PKHD1-201ENST00000340994 CCDC34Q96HJ3 373 aa10.43□□□□□ -0.74
PKHD1-201ENST00000340994 HAP1P54257 671 aaPredicted RBP10.42□□□□□ -0.74
PKHD1-201ENST00000340994 TIMELESSQ9UNS1 1208 aa10.42□□□□□ -0.74
PKHD1-201ENST00000340994 CEP162Q5TB80 1403 aa10.42□□□□□ -0.74
PKHD1-201ENST00000340994 RGS3P49796 1198 aa10.42□□□□□ -0.74
PKHD1-201ENST00000340994 FGD1P98174 961 aa10.42□□□□□ -0.74
PKHD1-201ENST00000340994 ZNF777Q9ULD5 760 aaPredicted RBP10.42□□□□□ -0.74
PKHD1-201ENST00000340994 GPS2Q13227 327 aa10.41□□□□□ -0.74
PKHD1-201ENST00000340994 AMER1Q5JTC6 1135 aaPredicted RBP10.41□□□□□ -0.74
PKHD1-201ENST00000340994 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.41□□□□□ -0.74
PKHD1-201ENST00000340994 STAG3Q9UJ98 1225 aa10.41□□□□□ -0.74
PKHD1-201ENST00000340994 MAP7D2Q96T17 732 aa10.4□□□□□ -0.74
PKHD1-201ENST00000340994 ZCCHC6Q5VYS8 1495 aaKnown RBP10.4□□□□□ -0.74
PKHD1-201ENST00000340994 NOM1Q5C9Z4 860 aaKnown RBP10.4□□□□□ -0.74
PKHD1-201ENST00000340994 MAPK8IP3Q9UPT6 1336 aa10.39□□□□□ -0.75
PKHD1-201ENST00000340994 TEX35Q5T0J7 233 aa10.38□□□□□ -0.75
PKHD1-201ENST00000340994 SKOR2Q2VWA4 1001 aaPredicted RBP10.38□□□□□ -0.75
PKHD1-201ENST00000340994 CEP164Q9UPV0 1460 aa10.38□□□□□ -0.75
PKHD1-201ENST00000340994 KCNJ4P48050 445 aa10.38□□□□□ -0.75
PKHD1-201ENST00000340994 NUDCQ9Y266 331 aa10.36□□□□□ -0.75
PKHD1-201ENST00000340994 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.36□□□□□ -0.75
PKHD1-201ENST00000340994 PHLDB1Q86UU1 1377 aa10.36□□□□□ -0.75
PKHD1-201ENST00000340994 TSPY4P0CV99 314 aa10.35□□□□□ -0.75
PKHD1-201ENST00000340994 TSPY10P0CW01 314 aa10.35□□□□□ -0.75
PKHD1-201ENST00000340994 VSIG10Q8N0Z9 540 aa10.35□□□□□ -0.75
PKHD1-201ENST00000340994 B4GALNT3Q6L9W6 998 aa10.35□□□□□ -0.75
PKHD1-201ENST00000340994 CCDC70Q6NSX1 233 aa10.33□□□□□ -0.76
PKHD1-201ENST00000340994 FANCIQ9NVI1 1328 aa10.33□□□□□ -0.76
PKHD1-201ENST00000340994 KIF16BQ96L93 1317 aa10.33□□□□□ -0.76
PKHD1-201ENST00000340994 GNL2Q13823 731 aaKnown RBP10.33□□□□□ -0.76
PKHD1-201ENST00000340994 KIAA1211Q6ZU35 1233 aa10.33□□□□□ -0.76
PKHD1-201ENST00000340994 IPO8O15397 1037 aaKnown RBP10.32□□□□□ -0.76
PKHD1-201ENST00000340994 GSE1Q14687 1217 aa10.32□□□□□ -0.76
PKHD1-201ENST00000340994 CALD1Q05682 793 aaKnown RBP10.32□□□□□ -0.76
PKHD1-201ENST00000340994 CWC15Q9P013 229 aaKnown RBP10.31□□□□□ -0.76
PKHD1-201ENST00000340994 ZNF771Q7L3S4 317 aaPredicted RBP10.31□□□□□ -0.76
PKHD1-201ENST00000340994 FHAD1B1AJZ9 1412 aa10.31□□□□□ -0.76
PKHD1-201ENST00000340994 RWDD1Q9H446 243 aaPredicted RBP10.3□□□□□ -0.76
PKHD1-201ENST00000340994 ATP6V1DQ9Y5K8 247 aa10.3□□□□□ -0.76
PKHD1-201ENST00000340994 KTN1Q86UP2 1357 aaKnown RBP10.3□□□□□ -0.76
PKHD1-201ENST00000340994 TPM3P06753 285 aa10.3□□□□□ -0.76
PKHD1-201ENST00000340994 OS9Q13438 667 aaPredicted RBP10.3□□□□□ -0.76
PKHD1-201ENST00000340994 P3H3Q8IVL6 736 aa10.3□□□□□ -0.76
PKHD1-201ENST00000340994 CCDC66A2RUB6 948 aa10.3□□□□□ -0.76
PKHD1-201ENST00000340994 TAF3Q5VWG9 929 aa10.3□□□□□ -0.76
PKHD1-201ENST00000340994 MYO15BQ96JP2 1530 aa10.29□□□□□ -0.76
PKHD1-201ENST00000340994 TNIKQ9UKE5 1360 aa10.29□□□□□ -0.76
PKHD1-201ENST00000340994 CHGAP10645 457 aaKnown RBP10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms