RNA–Protein interactions for RNA: ENST00000311637.9

ATP9A-201, Transcript of ATPase phospholipid transporting 9A (putative), humanhuman

TSL 1 (best) BASIC

Gene ATP9A, Length 7,437 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP9A-201ENST00000311637 ANP32BQ92688 251 aaKnown RBP13.17□□□□□ -0.3
ATP9A-201ENST00000311637 DCAF8L1A6NGE4 600 aa13.16□□□□□ -0.3
ATP9A-201ENST00000311637 UPF2Q9HAU5 1272 aaKnown RBP13.15□□□□□ -0.3
ATP9A-201ENST00000311637 TMX4Q9H1E5 349 aaPredicted RBP13.14□□□□□ -0.31
ATP9A-201ENST00000311637 PLEKHD1A6NEE1 506 aa13.13□□□□□ -0.31
ATP9A-201ENST00000311637 POGKQ9P215 609 aa13.13□□□□□ -0.31
ATP9A-201ENST00000311637 SOX12O15370 315 aa13.12□□□□□ -0.31
ATP9A-201ENST00000311637 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.11□□□□□ -0.31
ATP9A-201ENST00000311637 TONSLQ96HA7 1378 aa13.11□□□□□ -0.31
ATP9A-201ENST00000311637 RGL3Q3MIN7 710 aa13.1□□□□□ -0.31
ATP9A-201ENST00000311637 SCRIBQ14160 1630 aa13.08□□□□□ -0.31
ATP9A-201ENST00000311637 FAM9BQ8IZU0 186 aa13.07□□□□□ -0.32
ATP9A-201ENST00000311637 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.07□□□□□ -0.32
ATP9A-201ENST00000311637 LAS1LQ9Y4W2 734 aaKnown RBP13.07□□□□□ -0.32
ATP9A-201ENST00000311637 MEX3CQ5U5Q3 659 aaKnown RBP13.06□□□□□ -0.32
ATP9A-201ENST00000311637 CSRNP3Q8WYN3 585 aa13.06□□□□□ -0.32
ATP9A-201ENST00000311637 KRI1Q8N9T8 703 aaKnown RBP13.05□□□□□ -0.32
ATP9A-201ENST00000311637 CSB-PGBD3P0DP91 1061 aa13.05□□□□□ -0.32
ATP9A-201ENST00000311637 ZNF330Q9Y3S2 320 aaPredicted RBP13.05□□□□□ -0.32
ATP9A-201ENST00000311637 KLHL34Q8N239 644 aa13.04□□□□□ -0.32
ATP9A-201ENST00000311637 G3V3G9 751 aa13.04□□□□□ -0.32
ATP9A-201ENST00000311637 DCAF8Q5TAQ9 597 aa13.04□□□□□ -0.32
ATP9A-201ENST00000311637 HDGFP51858 240 aaKnown RBP13.03□□□□□ -0.32
ATP9A-201ENST00000311637 PAK3O75914 559 aaPredicted RBP13.03□□□□□ -0.32
ATP9A-201ENST00000311637 EIF4G2P78344 907 aaKnown RBP eCLIP13.03□□□□□ -0.32
ATP9A-201ENST00000311637 MTUS2Q5JR59 1369 aa13.02□□□□□ -0.32
ATP9A-201ENST00000311637 MSH5O43196 834 aa13.02□□□□□ -0.33
ATP9A-201ENST00000311637 ANP32AP39687 249 aaKnown RBP13.01□□□□□ -0.33
ATP9A-201ENST00000311637 TPRNQ4KMQ1 711 aa13□□□□□ -0.33
ATP9A-201ENST00000311637 OS9Q13438 667 aaPredicted RBP12.99□□□□□ -0.33
ATP9A-201ENST00000311637 PRM3Q9NNZ6 103 aa12.98□□□□□ -0.33
ATP9A-201ENST00000311637 CFAP53Q96M91 514 aa12.97□□□□□ -0.33
ATP9A-201ENST00000311637 RRP7BPQ9NSQ0 103 aa12.97□□□□□ -0.33
ATP9A-201ENST00000311637 NAP1L2Q9ULW6 460 aaPredicted RBP12.96□□□□□ -0.33
ATP9A-201ENST00000311637 ZRSR1Q15695 479 aaKnown RBP12.96□□□□□ -0.33
ATP9A-201ENST00000311637 TNNT2P45379 298 aaPredicted RBP12.94□□□□□ -0.34
ATP9A-201ENST00000311637 SAFB2Q14151 953 aaKnown RBP eCLIP12.91□□□□□ -0.34
ATP9A-201ENST00000311637 FGD1P98174 961 aa12.91□□□□□ -0.34
ATP9A-201ENST00000311637 MAPK8IP3Q9UPT6 1336 aa12.91□□□□□ -0.34
ATP9A-201ENST00000311637 GGT6Q6P531 493 aa12.9□□□□□ -0.34
ATP9A-201ENST00000311637 HNRNPUQ00839 825 aaKnown RBP eCLIP12.9□□□□□ -0.34
ATP9A-201ENST00000311637 CFDP1Q9UEE9 299 aaPredicted RBP12.9□□□□□ -0.34
ATP9A-201ENST00000311637 NEUROD2Q15784 382 aa12.9□□□□□ -0.34
ATP9A-201ENST00000311637 NCLP19338 710 aaKnown RBP12.89□□□□□ -0.35
ATP9A-201ENST00000311637 STK26Q9P289 416 aa12.86□□□□□ -0.35
ATP9A-201ENST00000311637 U2SURPO15042 1029 aaKnown RBP12.86□□□□□ -0.35
ATP9A-201ENST00000311637 SRPK2P78362 688 aaKnown RBP12.86□□□□□ -0.35
ATP9A-201ENST00000311637 CASC1Q6TDU7 716 aa12.85□□□□□ -0.35
ATP9A-201ENST00000311637 KCNJ4P48050 445 aa12.84□□□□□ -0.35
ATP9A-201ENST00000311637 NUDCQ9Y266 331 aa12.84□□□□□ -0.35
ATP9A-201ENST00000311637 KNSTRNQ9Y448 316 aa12.84□□□□□ -0.35
ATP9A-201ENST00000311637 DDX10Q13206 875 aaKnown RBP12.84□□□□□ -0.35
ATP9A-201ENST00000311637 GTF2E1P29083 439 aaPredicted RBP12.83□□□□□ -0.35
ATP9A-201ENST00000311637 FTSJ3Q8IY81 847 aaKnown RBP12.83□□□□□ -0.36
ATP9A-201ENST00000311637 AMER1Q5JTC6 1135 aaPredicted RBP12.82□□□□□ -0.36
ATP9A-201ENST00000311637 KANK1Q14678 1352 aa12.82□□□□□ -0.36
ATP9A-201ENST00000311637 CDCA8Q53HL2 280 aa12.81□□□□□ -0.36
ATP9A-201ENST00000311637 EID1Q9Y6B2 187 aa12.81□□□□□ -0.36
ATP9A-201ENST00000311637 SENP3-EIF4A1A0A087X0R7 540 aa12.8□□□□□ -0.36
ATP9A-201ENST00000311637 EVA1CP58658 441 aa12.8□□□□□ -0.36
ATP9A-201ENST00000311637 MRS2Q9HD23 443 aa12.8□□□□□ -0.36
ATP9A-201ENST00000311637 RTF1Q92541 710 aaKnown RBP12.79□□□□□ -0.36
ATP9A-201ENST00000311637 EIF5BO60841 1220 aaKnown RBP12.79□□□□□ -0.36
ATP9A-201ENST00000311637 CCDC136Q96JN2 1154 aa12.78□□□□□ -0.36
ATP9A-201ENST00000311637 CWC22Q9HCG8 908 aaKnown RBP12.77□□□□□ -0.36
ATP9A-201ENST00000311637 HIRIP3Q9BW71 556 aaPredicted RBP12.77□□□□□ -0.37
ATP9A-201ENST00000311637 CYB5RLQ6IPT4 315 aa12.75□□□□□ -0.37
ATP9A-201ENST00000311637 CHMP3Q9Y3E7 222 aa12.75□□□□□ -0.37
ATP9A-201ENST00000311637 TAF7LQ5H9L4 462 aa12.75□□□□□ -0.37
ATP9A-201ENST00000311637 PPP1R1BQ9UD71 204 aaPredicted RBP12.75□□□□□ -0.37
ATP9A-201ENST00000311637 FRAT2O75474 233 aaPredicted RBP12.74□□□□□ -0.37
ATP9A-201ENST00000311637 CNKSR2Q8WXI2 1034 aa12.74□□□□□ -0.37
ATP9A-201ENST00000311637 SF3B2Q13435 895 aaKnown RBP12.73□□□□□ -0.37
ATP9A-201ENST00000311637 FKBP8Q14318 412 aa12.72□□□□□ -0.37
ATP9A-201ENST00000311637 FOXD1Q16676 465 aa12.72□□□□□ -0.37
ATP9A-201ENST00000311637 CARD11Q9BXL7 1154 aa12.72□□□□□ -0.37
ATP9A-201ENST00000311637 EIF4G1Q04637 1599 aaKnown RBP12.71□□□□□ -0.37
ATP9A-201ENST00000311637 RSF1Q96T23 1441 aaPredicted RBP12.71□□□□□ -0.37
ATP9A-201ENST00000311637 VPS53Q5VIR6 699 aa12.71□□□□□ -0.37
ATP9A-201ENST00000311637 NUTM2FA1L443 756 aa12.71□□□□□ -0.37
ATP9A-201ENST00000311637 PNNQ9H307 717 aaKnown RBP12.71□□□□□ -0.38
ATP9A-201ENST00000311637 NBR1Q14596 966 aa12.7□□□□□ -0.38
ATP9A-201ENST00000311637 GNL2Q13823 731 aaKnown RBP12.7□□□□□ -0.38
ATP9A-201ENST00000311637 GORABQ5T7V8 394 aa12.7□□□□□ -0.38
ATP9A-201ENST00000311637 NGDNQ8NEJ9 315 aaKnown RBP12.7□□□□□ -0.38
ATP9A-201ENST00000311637 FRAT1Q92837 279 aaPredicted RBP12.68□□□□□ -0.38
ATP9A-201ENST00000311637 LTV1Q96GA3 475 aaPredicted RBP12.68□□□□□ -0.38
ATP9A-201ENST00000311637 SYTL4Q96C24 671 aaPredicted RBP12.67□□□□□ -0.38
ATP9A-201ENST00000311637 ANO8Q9HCE9 1232 aaPredicted RBP12.67□□□□□ -0.38
ATP9A-201ENST00000311637 PDE4CQ08493 712 aa12.67□□□□□ -0.38
ATP9A-201ENST00000311637 FBXW7Q969H0 707 aa12.67□□□□□ -0.38
ATP9A-201ENST00000311637 CTDP1Q9Y5B0 961 aaPredicted RBP12.67□□□□□ -0.38
ATP9A-201ENST00000311637 HDGFL2Q7Z4V5 671 aaPredicted RBP12.67□□□□□ -0.38
ATP9A-201ENST00000311637 CC2D1BQ5T0F9 858 aaKnown RBP12.66□□□□□ -0.38
ATP9A-201ENST00000311637 PLCB2Q00722 1185 aa12.65□□□□□ -0.38
ATP9A-201ENST00000311637 GOLGA6L22H0YM25 854 aa12.65□□□□□ -0.39
ATP9A-201ENST00000311637 NUTM2DQ5VT03 806 aaPredicted RBP12.65□□□□□ -0.39
ATP9A-201ENST00000311637 RAD21O60216 631 aa12.64□□□□□ -0.39
ATP9A-201ENST00000311637 TRIM44Q96DX7 344 aaPredicted RBP12.64□□□□□ -0.39
ATP9A-201ENST00000311637 RB1CC1Q8TDY2 1594 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms