RNA–Protein interactions for RNA: ENST00000303391.10

MECP2-201, Transcript of methyl-CpG binding protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MECP2, Length 10,505 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-201ENST00000303391 CHMP4BQ9H444 224 aaKnown RBP14.22□□□□□ -0.13
MECP2-201ENST00000303391 MSNP26038 577 aaKnown RBP14.21□□□□□ -0.13
MECP2-201ENST00000303391 EEA1Q15075 1411 aa14.21□□□□□ -0.13
MECP2-201ENST00000303391 CFAP44Q96MT7 982 aa14.2□□□□□ -0.14
MECP2-201ENST00000303391 DEKP35659 375 aaKnown RBP14.19□□□□□ -0.14
MECP2-201ENST00000303391 EIF4G2P78344 907 aaKnown RBP eCLIP14.15□□□□□ -0.14
MECP2-201ENST00000303391 MS4A1P11836 297 aa14.14□□□□□ -0.15
MECP2-201ENST00000303391 RSPH6AQ9H0K4 717 aa14.14□□□□□ -0.15
MECP2-201ENST00000303391 USP35Q9P2H5 1018 aa14.12□□□□□ -0.15
MECP2-201ENST00000303391 SUPT16HQ9Y5B9 1047 aaKnown RBP14.11□□□□□ -0.15
MECP2-201ENST00000303391 PNNQ9H307 717 aaKnown RBP14.08□□□□□ -0.16
MECP2-201ENST00000303391 CDCA8Q53HL2 280 aa14.08□□□□□ -0.16
MECP2-201ENST00000303391 HSCBQ8IWL3 235 aa14.06□□□□□ -0.16
MECP2-201ENST00000303391 CLIP1P30622 1438 aa14.05□□□□□ -0.16
MECP2-201ENST00000303391 KIAA2012Q0VF49 1180 aa14.05□□□□□ -0.16
MECP2-201ENST00000303391 GOLGA3Q08378 1498 aa14.04□□□□□ -0.16
MECP2-201ENST00000303391 HSP90AB1P08238 724 aaKnown RBP14.04□□□□□ -0.16
MECP2-201ENST00000303391 RSF1Q96T23 1441 aaPredicted RBP14.04□□□□□ -0.16
MECP2-201ENST00000303391 FTSJ3Q8IY81 847 aaKnown RBP14.03□□□□□ -0.16
MECP2-201ENST00000303391 GBP4Q96PP9 640 aa14.03□□□□□ -0.16
MECP2-201ENST00000303391 RTN4Q9NQC3 1192 aaKnown RBP14.03□□□□□ -0.16
MECP2-201ENST00000303391 LAS1LQ9Y4W2 734 aaKnown RBP14.03□□□□□ -0.16
MECP2-201ENST00000303391 CCER2I3L3R5 266 aa14.03□□□□□ -0.16
MECP2-201ENST00000303391 TNNT3P45378 269 aaPredicted RBP14.02□□□□□ -0.17
MECP2-201ENST00000303391 IRX6P78412 446 aaPredicted RBP14.01□□□□□ -0.17
MECP2-201ENST00000303391 SYAP1Q96A49 352 aaPredicted RBP14.01□□□□□ -0.17
MECP2-201ENST00000303391 ZCCHC6Q5VYS8 1495 aaKnown RBP14□□□□□ -0.17
MECP2-201ENST00000303391 CFAP53Q96M91 514 aa14□□□□□ -0.17
MECP2-201ENST00000303391 RBM19Q9Y4C8 960 aaKnown RBP13.99□□□□□ -0.17
MECP2-201ENST00000303391 TIMELESSQ9UNS1 1208 aa13.97□□□□□ -0.17
MECP2-201ENST00000303391 HSP90AA2PQ14568 343 aaPredicted RBP13.97□□□□□ -0.17
MECP2-201ENST00000303391 SCRIBQ14160 1630 aa13.97□□□□□ -0.17
MECP2-201ENST00000303391 MTUS2Q5JR59 1369 aa13.95□□□□□ -0.18
MECP2-201ENST00000303391 MCCP23508 829 aa13.95□□□□□ -0.18
MECP2-201ENST00000303391 TCERG1O14776 1098 aaKnown RBP13.94□□□□□ -0.18
MECP2-201ENST00000303391 SALL2Q9Y467 1007 aaPredicted RBP13.93□□□□□ -0.18
MECP2-201ENST00000303391 CEP162Q5TB80 1403 aa13.93□□□□□ -0.18
MECP2-201ENST00000303391 GOLGA6L4A6NEF3 574 aa13.93□□□□□ -0.18
MECP2-201ENST00000303391 GOLGA6L1Q8N7Z2 621 aa13.92□□□□□ -0.18
MECP2-201ENST00000303391 PHF14O94880 888 aa13.92□□□□□ -0.18
MECP2-201ENST00000303391 SETQ01105 290 aaPredicted RBP13.9□□□□□ -0.18
MECP2-201ENST00000303391 KNSTRNQ9Y448 316 aa13.9□□□□□ -0.18
MECP2-201ENST00000303391 GOLGA6L3A6NEY3 463 aa13.89□□□□□ -0.19
MECP2-201ENST00000303391 HTATSF1O43719 755 aaKnown RBP13.89□□□□□ -0.19
MECP2-201ENST00000303391 DRC7Q8IY82 874 aa13.88□□□□□ -0.19
MECP2-201ENST00000303391 CEP164Q9UPV0 1460 aa13.88□□□□□ -0.19
MECP2-201ENST00000303391 IPO9Q96P70 1041 aaKnown RBP13.88□□□□□ -0.19
MECP2-201ENST00000303391 ZNF777Q9ULD5 760 aaPredicted RBP13.87□□□□□ -0.19
MECP2-201ENST00000303391 CSPP1Q1MSJ5 1256 aa13.86□□□□□ -0.19
MECP2-201ENST00000303391 HAP1P54257 671 aaPredicted RBP13.85□□□□□ -0.19
MECP2-201ENST00000303391 MTERF4Q7Z6M4 381 aaKnown RBP13.85□□□□□ -0.19
MECP2-201ENST00000303391 ESF1Q9H501 851 aaKnown RBP13.85□□□□□ -0.19
MECP2-201ENST00000303391 DDX11L8A8MPP1 907 aa13.84□□□□□ -0.19
MECP2-201ENST00000303391 PLCB2Q00722 1185 aa13.84□□□□□ -0.19
MECP2-201ENST00000303391 A0A0U1RQG5 324 aaPredicted RBP13.83□□□□□ -0.2
MECP2-201ENST00000303391 STAG3Q9UJ98 1225 aa13.83□□□□□ -0.2
MECP2-201ENST00000303391 TSPY4P0CV99 314 aa13.83□□□□□ -0.2
MECP2-201ENST00000303391 TSPY10P0CW01 314 aa13.83□□□□□ -0.2
MECP2-201ENST00000303391 RGS3P49796 1198 aa13.82□□□□□ -0.2
MECP2-201ENST00000303391 TNIKQ9UKE5 1360 aa13.82□□□□□ -0.2
MECP2-201ENST00000303391 TPM4P67936 248 aa13.82□□□□□ -0.2
MECP2-201ENST00000303391 MYO15BQ96JP2 1530 aa13.81□□□□□ -0.2
MECP2-201ENST00000303391 MAP7D2Q96T17 732 aa13.81□□□□□ -0.2
MECP2-201ENST00000303391 CALRP27797 417 aaKnown RBP13.8□□□□□ -0.2
MECP2-201ENST00000303391 CCDC34Q96HJ3 373 aa13.8□□□□□ -0.2
MECP2-201ENST00000303391 NUDCQ9Y266 331 aa13.8□□□□□ -0.2
MECP2-201ENST00000303391 PHLDB1Q86UU1 1377 aa13.79□□□□□ -0.2
MECP2-201ENST00000303391 B4GALNT3Q6L9W6 998 aa13.79□□□□□ -0.2
MECP2-201ENST00000303391 MAPK8IP3Q9UPT6 1336 aa13.79□□□□□ -0.2
MECP2-201ENST00000303391 SKOR2Q2VWA4 1001 aaPredicted RBP13.78□□□□□ -0.2
MECP2-201ENST00000303391 FANCIQ9NVI1 1328 aa13.78□□□□□ -0.2
MECP2-201ENST00000303391 FGD1P98174 961 aa13.78□□□□□ -0.2
MECP2-201ENST00000303391 P3H3Q8IVL6 736 aa13.78□□□□□ -0.2
MECP2-201ENST00000303391 FHAD1B1AJZ9 1412 aa13.77□□□□□ -0.2
MECP2-201ENST00000303391 RB1CC1Q8TDY2 1594 aa13.76□□□□□ -0.21
MECP2-201ENST00000303391 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.76□□□□□ -0.21
MECP2-201ENST00000303391 GPS2Q13227 327 aa13.76□□□□□ -0.21
MECP2-201ENST00000303391 KCNJ4P48050 445 aa13.74□□□□□ -0.21
MECP2-201ENST00000303391 TSHZ2Q9NRE2 1034 aa13.74□□□□□ -0.21
MECP2-201ENST00000303391 IPO8O15397 1037 aaKnown RBP13.73□□□□□ -0.21
MECP2-201ENST00000303391 NOC3LQ8WTT2 800 aaKnown RBP13.73□□□□□ -0.21
MECP2-201ENST00000303391 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.73□□□□□ -0.21
MECP2-201ENST00000303391 TEX35Q5T0J7 233 aa13.72□□□□□ -0.21
MECP2-201ENST00000303391 NOM1Q5C9Z4 860 aaKnown RBP13.72□□□□□ -0.21
MECP2-201ENST00000303391 KDM2AQ9Y2K7 1162 aa13.71□□□□□ -0.21
MECP2-201ENST00000303391 RWDD1Q9H446 243 aaPredicted RBP13.71□□□□□ -0.21
MECP2-201ENST00000303391 CHGAP10645 457 aaKnown RBP13.71□□□□□ -0.22
MECP2-201ENST00000303391 PMFBP1Q8TBY8 1022 aa13.71□□□□□ -0.22
MECP2-201ENST00000303391 GSE1Q14687 1217 aa13.7□□□□□ -0.22
MECP2-201ENST00000303391 CCNB3Q8WWL7 1395 aa13.7□□□□□ -0.22
MECP2-201ENST00000303391 CALD1Q05682 793 aaKnown RBP13.7□□□□□ -0.22
MECP2-201ENST00000303391 KTN1Q86UP2 1357 aaKnown RBP13.7□□□□□ -0.22
MECP2-201ENST00000303391 KIAA1211Q6ZU35 1233 aa13.69□□□□□ -0.22
MECP2-201ENST00000303391 PDE3BQ13370 1112 aa13.69□□□□□ -0.22
MECP2-201ENST00000303391 VSIG10Q8N0Z9 540 aa13.69□□□□□ -0.22
MECP2-201ENST00000303391 ROCK2O75116 1388 aaKnown RBP13.68□□□□□ -0.22
MECP2-201ENST00000303391 CHMP4AQ9BY43 222 aa13.68□□□□□ -0.22
MECP2-201ENST00000303391 RALBP1Q15311 655 aa13.68□□□□□ -0.22
MECP2-201ENST00000303391 FBLN2P98095 1184 aa13.68□□□□□ -0.22
MECP2-201ENST00000303391 CARD11Q9BXL7 1154 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 96.7 ms