RNA–Protein interactions for RNA: ENST00000262795.5

SHANK3-201, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

APPRIS P5 TSL 5 BASIC

Gene SHANK3, Length 7,091 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-201ENST00000262795 SENP3-EIF4A1A0A087X0R7 540 aa21.36■■□□□ 1.01
SHANK3-201ENST00000262795 WDR43Q15061 677 aaKnown RBP eCLIP21.34■■□□□ 1.01
SHANK3-201ENST00000262795 TPRNQ4KMQ1 711 aa21.34■■□□□ 1.01
SHANK3-201ENST00000262795 GLIPR1L2Q4G1C9 344 aa21.32■■□□□ 1
SHANK3-201ENST00000262795 CCDC9Q9Y3X0 531 aaKnown RBP21.32■■□□□ 1
SHANK3-201ENST00000262795 TONSLQ96HA7 1378 aa21.3■■□□□ 1
SHANK3-201ENST00000262795 CSRNP3Q8WYN3 585 aa21.29■■□□□ 1
SHANK3-201ENST00000262795 LAS1LQ9Y4W2 734 aaKnown RBP21.27■■□□□ 1
SHANK3-201ENST00000262795 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.26■□□□□ 0.99
SHANK3-201ENST00000262795 NBR1Q14596 966 aa21.26■□□□□ 0.99
SHANK3-201ENST00000262795 RRP7BPQ9NSQ0 103 aa21.24■□□□□ 0.99
SHANK3-201ENST00000262795 HIRIP3Q9BW71 556 aaPredicted RBP21.21■□□□□ 0.99
SHANK3-201ENST00000262795 MYH16Q9H6N6 1097 aa21.19■□□□□ 0.98
SHANK3-201ENST00000262795 ISY1Q9ULR0 285 aaKnown RBP21.18■□□□□ 0.98
SHANK3-201ENST00000262795 POGKQ9P215 609 aa21.17■□□□□ 0.98
SHANK3-201ENST00000262795 TNNT2P45379 298 aaPredicted RBP21.16■□□□□ 0.98
SHANK3-201ENST00000262795 UPF2Q9HAU5 1272 aaKnown RBP21.16■□□□□ 0.98
SHANK3-201ENST00000262795 PLEKHD1A6NEE1 506 aa21.15■□□□□ 0.98
SHANK3-201ENST00000262795 CLSTN1O94985 981 aa21.15■□□□□ 0.98
SHANK3-201ENST00000262795 FKBP8Q14318 412 aa21.14■□□□□ 0.98
SHANK3-201ENST00000262795 ANP32BQ92688 251 aaKnown RBP21.13■□□□□ 0.97
SHANK3-201ENST00000262795 ANP32AP39687 249 aaKnown RBP21.12■□□□□ 0.97
SHANK3-201ENST00000262795 MTUS2Q5JR59 1369 aa21.12■□□□□ 0.97
SHANK3-201ENST00000262795 GOLGA2Q08379 1002 aa21.12■□□□□ 0.97
SHANK3-201ENST00000262795 DDX10Q13206 875 aaKnown RBP21.12■□□□□ 0.97
SHANK3-201ENST00000262795 HNRNPUQ00839 825 aaKnown RBP eCLIP21.12■□□□□ 0.97
SHANK3-201ENST00000262795 PHF23Q9BUL5 403 aaPredicted RBP21.1■□□□□ 0.97
SHANK3-201ENST00000262795 ZNF330Q9Y3S2 320 aaPredicted RBP21.09■□□□□ 0.97
SHANK3-201ENST00000262795 SAFB2Q14151 953 aaKnown RBP eCLIP21.08■□□□□ 0.97
SHANK3-201ENST00000262795 PAK3O75914 559 aaPredicted RBP21.07■□□□□ 0.96
SHANK3-201ENST00000262795 NEUROD2Q15784 382 aa21.06■□□□□ 0.96
SHANK3-201ENST00000262795 AMER1Q5JTC6 1135 aaPredicted RBP21.04■□□□□ 0.96
SHANK3-201ENST00000262795 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.03■□□□□ 0.96
SHANK3-201ENST00000262795 NAP1L2Q9ULW6 460 aaPredicted RBP20.99■□□□□ 0.95
SHANK3-201ENST00000262795 CSB-PGBD3P0DP91 1061 aa20.97■□□□□ 0.95
SHANK3-201ENST00000262795 IRX6P78412 446 aaPredicted RBP20.95■□□□□ 0.94
SHANK3-201ENST00000262795 OS9Q13438 667 aaPredicted RBP20.94■□□□□ 0.94
SHANK3-201ENST00000262795 STK26Q9P289 416 aa20.94■□□□□ 0.94
SHANK3-201ENST00000262795 KLHL34Q8N239 644 aa20.93■□□□□ 0.94
SHANK3-201ENST00000262795 GGT6Q6P531 493 aa20.9■□□□□ 0.94
SHANK3-201ENST00000262795 CFDP1Q9UEE9 299 aaPredicted RBP20.9■□□□□ 0.94
SHANK3-201ENST00000262795 MSH5O43196 834 aa20.88■□□□□ 0.93
SHANK3-201ENST00000262795 MRS2Q9HD23 443 aa20.88■□□□□ 0.93
SHANK3-201ENST00000262795 U2SURPO15042 1029 aaKnown RBP20.88■□□□□ 0.93
SHANK3-201ENST00000262795 MEX3CQ5U5Q3 659 aaKnown RBP20.88■□□□□ 0.93
SHANK3-201ENST00000262795 CFAP53Q96M91 514 aa20.85■□□□□ 0.93
SHANK3-201ENST00000262795 TMX4Q9H1E5 349 aaPredicted RBP20.84■□□□□ 0.93
SHANK3-201ENST00000262795 EIF4G1Q04637 1599 aaKnown RBP20.82■□□□□ 0.92
SHANK3-201ENST00000262795 CCDC136Q96JN2 1154 aa20.82■□□□□ 0.92
SHANK3-201ENST00000262795 G3V3G9 751 aa20.82■□□□□ 0.92
SHANK3-201ENST00000262795 DCAF8Q5TAQ9 597 aa20.82■□□□□ 0.92
SHANK3-201ENST00000262795 SRPK2P78362 688 aaKnown RBP20.82■□□□□ 0.92
SHANK3-201ENST00000262795 MAPK8IP3Q9UPT6 1336 aa20.8■□□□□ 0.92
SHANK3-201ENST00000262795 RTN4Q9NQC3 1192 aaKnown RBP20.8■□□□□ 0.92
SHANK3-201ENST00000262795 KNSTRNQ9Y448 316 aa20.78■□□□□ 0.92
SHANK3-201ENST00000262795 FTSJ3Q8IY81 847 aaKnown RBP20.77■□□□□ 0.92
SHANK3-201ENST00000262795 NCLP19338 710 aaKnown RBP20.77■□□□□ 0.92
SHANK3-201ENST00000262795 FGD1P98174 961 aa20.76■□□□□ 0.91
SHANK3-201ENST00000262795 ZRSR1Q15695 479 aaKnown RBP20.75■□□□□ 0.91
SHANK3-201ENST00000262795 CC2D1BQ5T0F9 858 aaKnown RBP20.75■□□□□ 0.91
SHANK3-201ENST00000262795 NUTM2DQ5VT03 806 aaPredicted RBP20.75■□□□□ 0.91
SHANK3-201ENST00000262795 NUTM2FA1L443 756 aa20.74■□□□□ 0.91
SHANK3-201ENST00000262795 PRM3Q9NNZ6 103 aa20.72■□□□□ 0.91
SHANK3-201ENST00000262795 HDGFP51858 240 aaKnown RBP20.72■□□□□ 0.91
SHANK3-201ENST00000262795 KCNJ4P48050 445 aa20.7■□□□□ 0.9
SHANK3-201ENST00000262795 ANO8Q9HCE9 1232 aaPredicted RBP20.7■□□□□ 0.9
SHANK3-201ENST00000262795 CARD11Q9BXL7 1154 aa20.69■□□□□ 0.9
SHANK3-201ENST00000262795 FRAT1Q92837 279 aaPredicted RBP20.68■□□□□ 0.9
SHANK3-201ENST00000262795 ZCCHC6Q5VYS8 1495 aaKnown RBP20.65■□□□□ 0.9
SHANK3-201ENST00000262795 CASC1Q6TDU7 716 aa20.65■□□□□ 0.9
SHANK3-201ENST00000262795 NUDCQ9Y266 331 aa20.63■□□□□ 0.89
SHANK3-201ENST00000262795 ANP32EQ9BTT0 268 aa20.63■□□□□ 0.89
SHANK3-201ENST00000262795 CHMP3Q9Y3E7 222 aa20.63■□□□□ 0.89
SHANK3-201ENST00000262795 EIF4G2P78344 907 aaKnown RBP eCLIP20.62■□□□□ 0.89
SHANK3-201ENST00000262795 MIER1Q8N108 512 aa20.62■□□□□ 0.89
SHANK3-201ENST00000262795 CYB5RLQ6IPT4 315 aa20.61■□□□□ 0.89
SHANK3-201ENST00000262795 KANK1Q14678 1352 aa20.6■□□□□ 0.89
SHANK3-201ENST00000262795 LTV1Q96GA3 475 aaPredicted RBP20.6■□□□□ 0.89
SHANK3-201ENST00000262795 RTF1Q92541 710 aaKnown RBP20.59■□□□□ 0.89
SHANK3-201ENST00000262795 APBB1O00213 710 aa20.59■□□□□ 0.89
SHANK3-201ENST00000262795 RB1CC1Q8TDY2 1594 aa20.57■□□□□ 0.88
SHANK3-201ENST00000262795 DCAF8L1A6NGE4 600 aa20.57■□□□□ 0.88
SHANK3-201ENST00000262795 PLCB2Q00722 1185 aa20.57■□□□□ 0.88
SHANK3-201ENST00000262795 EVA1CP58658 441 aa20.55■□□□□ 0.88
SHANK3-201ENST00000262795 PDE4CQ08493 712 aa20.55■□□□□ 0.88
SHANK3-201ENST00000262795 KRI1Q8N9T8 703 aaKnown RBP20.54■□□□□ 0.88
SHANK3-201ENST00000262795 GTF2E1P29083 439 aaPredicted RBP20.54■□□□□ 0.88
SHANK3-201ENST00000262795 CDCA8Q53HL2 280 aa20.53■□□□□ 0.88
SHANK3-201ENST00000262795 RSF1Q96T23 1441 aaPredicted RBP20.53■□□□□ 0.88
SHANK3-201ENST00000262795 BAZ1BQ9UIG0 1483 aaKnown RBP20.52■□□□□ 0.88
SHANK3-201ENST00000262795 DCAF11Q8TEB1 546 aa20.5■□□□□ 0.87
SHANK3-201ENST00000262795 EID1Q9Y6B2 187 aa20.5■□□□□ 0.87
SHANK3-201ENST00000262795 TAF7LQ5H9L4 462 aa20.49■□□□□ 0.87
SHANK3-201ENST00000262795 PPP1R1BQ9UD71 204 aaPredicted RBP20.48■□□□□ 0.87
SHANK3-201ENST00000262795 SYTL4Q96C24 671 aaPredicted RBP20.46■□□□□ 0.87
SHANK3-201ENST00000262795 FRAT2O75474 233 aaPredicted RBP20.46■□□□□ 0.87
SHANK3-201ENST00000262795 NGDNQ8NEJ9 315 aaKnown RBP20.45■□□□□ 0.86
SHANK3-201ENST00000262795 FBXW7Q969H0 707 aa20.45■□□□□ 0.86
SHANK3-201ENST00000262795 VPS53Q5VIR6 699 aa20.45■□□□□ 0.86
SHANK3-201ENST00000262795 GNL2Q13823 731 aaKnown RBP20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms