RNA–Protein interactions for RNA: ENST00000244815.9

LRRFIP1-201, Transcript of LRR binding FLII interacting protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LRRFIP1, Length 4,370 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRFIP1-201ENST00000244815 CHGAP10645 457 aaKnown RBP21.39■■□□□ 1.01
LRRFIP1-201ENST00000244815 ANP32EQ9BTT0 268 aa21.38■■□□□ 1.01
LRRFIP1-201ENST00000244815 UPF2Q9HAU5 1272 aaKnown RBP21.37■■□□□ 1.01
LRRFIP1-201ENST00000244815 SOGA1O94964 1423 aa21.37■■□□□ 1.01
LRRFIP1-201ENST00000244815 SLC24A1O60721 1099 aa21.36■■□□□ 1.01
LRRFIP1-201ENST00000244815 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.34■■□□□ 1.01
LRRFIP1-201ENST00000244815 WDR43Q15061 677 aaKnown RBP eCLIP21.33■■□□□ 1.01
LRRFIP1-201ENST00000244815 KIF27Q86VH2 1401 aa21.33■■□□□ 1.01
LRRFIP1-201ENST00000244815 SENP3-EIF4A1A0A087X0R7 540 aa21.33■■□□□ 1
LRRFIP1-201ENST00000244815 HSP90AA1P07900 732 aaKnown RBP21.3■■□□□ 1
LRRFIP1-201ENST00000244815 NACADO15069 1562 aa21.28■■□□□ 1
LRRFIP1-201ENST00000244815 CCNB3Q8WWL7 1395 aa21.27■■□□□ 1
LRRFIP1-201ENST00000244815 BAZ1AQ9NRL2 1556 aaPredicted RBP21.24■□□□□ 0.99
LRRFIP1-201ENST00000244815 BAZ1BQ9UIG0 1483 aaKnown RBP21.24■□□□□ 0.99
LRRFIP1-201ENST00000244815 ANP32BQ92688 251 aaKnown RBP21.19■□□□□ 0.98
LRRFIP1-201ENST00000244815 PPP4R2Q9NY27 417 aa21.19■□□□□ 0.98
LRRFIP1-201ENST00000244815 RGL3Q3MIN7 710 aa21.19■□□□□ 0.98
LRRFIP1-201ENST00000244815 CHMP7Q8WUX9 453 aaPredicted RBP21.19■□□□□ 0.98
LRRFIP1-201ENST00000244815 VPS8Q8N3P4 1428 aa21.17■□□□□ 0.98
LRRFIP1-201ENST00000244815 ARXQ96QS3 562 aa21.15■□□□□ 0.98
LRRFIP1-201ENST00000244815 TIMELESSQ9UNS1 1208 aa21.15■□□□□ 0.98
LRRFIP1-201ENST00000244815 KANK4Q5T7N3 995 aaPredicted RBP21.15■□□□□ 0.98
LRRFIP1-201ENST00000244815 CFDP1Q9UEE9 299 aaPredicted RBP21.13■□□□□ 0.97
LRRFIP1-201ENST00000244815 CCDC88BA6NC98 1476 aa21.12■□□□□ 0.97
LRRFIP1-201ENST00000244815 STAG3Q9UJ98 1225 aa21.12■□□□□ 0.97
LRRFIP1-201ENST00000244815 MROH2BQ7Z745 1585 aa21.12■□□□□ 0.97
LRRFIP1-201ENST00000244815 PLEKHD1A6NEE1 506 aa21.11■□□□□ 0.97
LRRFIP1-201ENST00000244815 CARD11Q9BXL7 1154 aa21.11■□□□□ 0.97
LRRFIP1-201ENST00000244815 B4GALNT3Q6L9W6 998 aa21.11■□□□□ 0.97
LRRFIP1-201ENST00000244815 CCER2I3L3R5 266 aa21.09■□□□□ 0.97
LRRFIP1-201ENST00000244815 ABCC8Q09428 1581 aa21.07■□□□□ 0.96
LRRFIP1-201ENST00000244815 DDRGK1Q96HY6 314 aa21.06■□□□□ 0.96
LRRFIP1-201ENST00000244815 RBM19Q9Y4C8 960 aaKnown RBP21.04■□□□□ 0.96
LRRFIP1-201ENST00000244815 FHAD1B1AJZ9 1412 aa21.04■□□□□ 0.96
LRRFIP1-201ENST00000244815 NPM1P06748 294 aaKnown RBP eCLIP21.04■□□□□ 0.96
LRRFIP1-201ENST00000244815 CARMIL1Q5VZK9 1371 aa21.02■□□□□ 0.96
LRRFIP1-201ENST00000244815 SETD5Q9C0A6 1442 aa21.02■□□□□ 0.96
LRRFIP1-201ENST00000244815 ESF1Q9H501 851 aaKnown RBP21.01■□□□□ 0.95
LRRFIP1-201ENST00000244815 KCNH8Q96L42 1107 aa21■□□□□ 0.95
LRRFIP1-201ENST00000244815 KNSTRNQ9Y448 316 aa21■□□□□ 0.95
LRRFIP1-201ENST00000244815 NOP58Q9Y2X3 529 aaKnown RBP20.97■□□□□ 0.95
LRRFIP1-201ENST00000244815 BECN1Q14457 450 aa20.97■□□□□ 0.95
LRRFIP1-201ENST00000244815 RAB3GAP2Q9H2M9 1393 aa20.95■□□□□ 0.94
LRRFIP1-201ENST00000244815 CUX2O14529 1486 aa20.95■□□□□ 0.94
LRRFIP1-201ENST00000244815 PPM1GO15355 546 aaPredicted RBP20.95■□□□□ 0.94
LRRFIP1-201ENST00000244815 HSPA5P11021 654 aaKnown RBP20.95■□□□□ 0.94
LRRFIP1-201ENST00000244815 LAS1LQ9Y4W2 734 aaKnown RBP20.94■□□□□ 0.94
LRRFIP1-201ENST00000244815 CDCA8Q53HL2 280 aa20.93■□□□□ 0.94
LRRFIP1-201ENST00000244815 TSHZ2Q9NRE2 1034 aa20.92■□□□□ 0.94
LRRFIP1-201ENST00000244815 PPP1R15AO75807 674 aaPredicted RBP20.9■□□□□ 0.94
LRRFIP1-201ENST00000244815 RGS3P49796 1198 aa20.9■□□□□ 0.94
LRRFIP1-201ENST00000244815 GLIPR1L2Q4G1C9 344 aa20.89■□□□□ 0.93
LRRFIP1-201ENST00000244815 SENP3Q9H4L4 574 aaPredicted RBP20.89■□□□□ 0.93
LRRFIP1-201ENST00000244815 NEUROD2Q15784 382 aa20.88■□□□□ 0.93
LRRFIP1-201ENST00000244815 CC2D1BQ5T0F9 858 aaKnown RBP20.86■□□□□ 0.93
LRRFIP1-201ENST00000244815 MYH16Q9H6N6 1097 aa20.86■□□□□ 0.93
LRRFIP1-201ENST00000244815 DCAF11Q8TEB1 546 aa20.85■□□□□ 0.93
LRRFIP1-201ENST00000244815 FOXD1Q16676 465 aa20.84■□□□□ 0.93
LRRFIP1-201ENST00000244815 CFAP53Q96M91 514 aa20.84■□□□□ 0.93
LRRFIP1-201ENST00000244815 ARHGAP35Q9NRY4 1499 aa20.81■□□□□ 0.92
LRRFIP1-201ENST00000244815 ERICH6BQ5W0A0 696 aa20.8■□□□□ 0.92
LRRFIP1-201ENST00000244815 PLPPR3Q6T4P5 718 aa20.79■□□□□ 0.92
LRRFIP1-201ENST00000244815 RTN4Q9NQC3 1192 aaKnown RBP20.79■□□□□ 0.92
LRRFIP1-201ENST00000244815 FRAT1Q92837 279 aaPredicted RBP20.78■□□□□ 0.92
LRRFIP1-201ENST00000244815 FTSJ3Q8IY81 847 aaKnown RBP20.76■□□□□ 0.91
LRRFIP1-201ENST00000244815 TRIM44Q96DX7 344 aaPredicted RBP20.76■□□□□ 0.91
LRRFIP1-201ENST00000244815 DEKP35659 375 aaKnown RBP20.75■□□□□ 0.91
LRRFIP1-201ENST00000244815 WIZO95785 1651 aa20.75■□□□□ 0.91
LRRFIP1-201ENST00000244815 DHX57Q6P158 1386 aaKnown RBP20.75■□□□□ 0.91
LRRFIP1-201ENST00000244815 MPHOSPH9Q99550 1183 aa20.74■□□□□ 0.91
LRRFIP1-201ENST00000244815 PKD2Q13563 968 aa20.74■□□□□ 0.91
LRRFIP1-201ENST00000244815 TMF1P82094 1093 aa20.73■□□□□ 0.91
LRRFIP1-201ENST00000244815 TNNT2P45379 298 aaPredicted RBP20.73■□□□□ 0.91
LRRFIP1-201ENST00000244815 GOLGA6L22H0YM25 854 aa20.72■□□□□ 0.91
LRRFIP1-201ENST00000244815 RAPGEF2Q9Y4G8 1499 aa20.71■□□□□ 0.91
LRRFIP1-201ENST00000244815 RUSC2Q8N2Y8 1516 aa20.71■□□□□ 0.91
LRRFIP1-201ENST00000244815 L3MBTL2Q969R5 705 aa20.69■□□□□ 0.9
LRRFIP1-201ENST00000244815 TOP2AP11388 1531 aaKnown RBP20.67■□□□□ 0.9
LRRFIP1-201ENST00000244815 NUDCQ9Y266 331 aa20.65■□□□□ 0.9
LRRFIP1-201ENST00000244815 MAPK8IP3Q9UPT6 1336 aa20.65■□□□□ 0.9
LRRFIP1-201ENST00000244815 RCAN3Q9UKA8 241 aa20.65■□□□□ 0.9
LRRFIP1-201ENST00000244815 EIF4G1Q04637 1599 aaKnown RBP20.64■□□□□ 0.9
LRRFIP1-201ENST00000244815 NCLP19338 710 aaKnown RBP20.64■□□□□ 0.89
LRRFIP1-201ENST00000244815 FMN1Q68DA7 1419 aa20.63■□□□□ 0.89
LRRFIP1-201ENST00000244815 U2SURPO15042 1029 aaKnown RBP20.59■□□□□ 0.89
LRRFIP1-201ENST00000244815 TDRD9Q8NDG6 1382 aaKnown RBP20.59■□□□□ 0.89
LRRFIP1-201ENST00000244815 KTN1Q86UP2 1357 aaKnown RBP20.59■□□□□ 0.89
LRRFIP1-201ENST00000244815 TCERG1O14776 1098 aaKnown RBP20.57■□□□□ 0.88
LRRFIP1-201ENST00000244815 RALBP1Q15311 655 aa20.57■□□□□ 0.88
LRRFIP1-201ENST00000244815 MS4A1P11836 297 aa20.56■□□□□ 0.88
LRRFIP1-201ENST00000244815 SMARCA2P51531 1590 aa20.55■□□□□ 0.88
LRRFIP1-201ENST00000244815 FHOD3Q2V2M9 1422 aa20.55■□□□□ 0.88
LRRFIP1-201ENST00000244815 NUP155O75694 1391 aa20.55■□□□□ 0.88
LRRFIP1-201ENST00000244815 POGKQ9P215 609 aa20.53■□□□□ 0.88
LRRFIP1-201ENST00000244815 PLEKHG5O94827 1062 aa20.5■□□□□ 0.87
LRRFIP1-201ENST00000244815 CASC1Q6TDU7 716 aa20.5■□□□□ 0.87
LRRFIP1-201ENST00000244815 IPO9Q96P70 1041 aaKnown RBP20.5■□□□□ 0.87
LRRFIP1-201ENST00000244815 MORC1Q86VD1 984 aa20.5■□□□□ 0.87
LRRFIP1-201ENST00000244815 C14orf37Q86TY3 774 aa20.5■□□□□ 0.87
LRRFIP1-201ENST00000244815 NAP1L5Q96NT1 182 aaPredicted RBP20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms