RNA–Protein interactions for RNA: ENST00000641375.1

PHGDH-216, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,196 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-216ENST00000641375 GTSF1LQ9H1H1 148 aa11.84□□□□□ -0.51
PHGDH-216ENST00000641375 SPCS1Q9Y6A9 102 aa11.84□□□□□ -0.51
PHGDH-216ENST00000641375 PRSS1P07477 247 aa11.84□□□□□ -0.51
PHGDH-216ENST00000641375 SMAGPQ0VAQ4 97 aa11.84□□□□□ -0.51
PHGDH-216ENST00000641375 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.83□□□□□ -0.52
PHGDH-216ENST00000641375 IGHV3-53P01767 116 aa11.83□□□□□ -0.52
PHGDH-216ENST00000641375 C2orf66Q6UXQ4 117 aa11.83□□□□□ -0.52
PHGDH-216ENST00000641375 I3L3M4 83 aa11.82□□□□□ -0.52
PHGDH-216ENST00000641375 NOP10Q9NPE3 64 aaKnown RBP11.82□□□□□ -0.52
PHGDH-216ENST00000641375 TRRAPQ9Y4A5 3859 aa11.82□□□□□ -0.52
PHGDH-216ENST00000641375 PLAC8L1A1L4L8 177 aa11.82□□□□□ -0.52
PHGDH-216ENST00000641375 SIVA1O15304 175 aa11.82□□□□□ -0.52
PHGDH-216ENST00000641375 FGF6P10767 208 aa11.82□□□□□ -0.52
PHGDH-216ENST00000641375 CKS1BP61024 79 aa11.82□□□□□ -0.52
PHGDH-216ENST00000641375 PRIMA1Q86XR5 153 aa11.82□□□□□ -0.52
PHGDH-216ENST00000641375 KIR2DL5BQ8NHK3 375 aa11.82□□□□□ -0.52
PHGDH-216ENST00000641375 SCGB3A1Q96QR1 104 aa11.82□□□□□ -0.52
PHGDH-216ENST00000641375 SPATA25Q9BR10 227 aa11.82□□□□□ -0.52
PHGDH-216ENST00000641375 CYSLTR1Q9Y271 337 aa11.82□□□□□ -0.52
PHGDH-216ENST00000641375 TNFRSF18Q9Y5U5 241 aa11.82□□□□□ -0.52
PHGDH-216ENST00000641375 GAGE12HA6NDE8 117 aa11.81□□□□□ -0.52
PHGDH-216ENST00000641375 J3QR89 54 aa11.81□□□□□ -0.52
PHGDH-216ENST00000641375 Q6ZTI0 123 aa11.81□□□□□ -0.52
PHGDH-216ENST00000641375 MTURNQ8N3F0 131 aa11.81□□□□□ -0.52
PHGDH-216ENST00000641375 OVOL2Q9BRP0 275 aa11.81□□□□□ -0.52
PHGDH-216ENST00000641375 TRAV4A0A0B4J268 109 aa11.81□□□□□ -0.52
PHGDH-216ENST00000641375 TEX48A0A1B0GUV7 120 aa11.81□□□□□ -0.52
PHGDH-216ENST00000641375 FABP2P12104 132 aa11.81□□□□□ -0.52
PHGDH-216ENST00000641375 RHOHQ15669 191 aa11.81□□□□□ -0.52
PHGDH-216ENST00000641375 DNAJC30Q96LL9 226 aa11.81□□□□□ -0.52
PHGDH-216ENST00000641375 APOC4P55056 127 aa11.8□□□□□ -0.52
PHGDH-216ENST00000641375 RPL24P83731 157 aaKnown RBP11.8□□□□□ -0.52
PHGDH-216ENST00000641375 FBN1P35555 2871 aaKnown RBP11.8□□□□□ -0.52
PHGDH-216ENST00000641375 SMIM9A6NGZ8 99 aa11.79□□□□□ -0.52
PHGDH-216ENST00000641375 Q6ZSN1 163 aa11.79□□□□□ -0.52
PHGDH-216ENST00000641375 P0DMU3 169 aa11.79□□□□□ -0.52
PHGDH-216ENST00000641375 FAM231AP0DMU4 169 aa11.79□□□□□ -0.52
PHGDH-216ENST00000641375 FAM231CP0DMU5 169 aa11.79□□□□□ -0.52
PHGDH-216ENST00000641375 CRYBA4P53673 196 aa11.79□□□□□ -0.52
PHGDH-216ENST00000641375 ODF1Q14990 250 aa11.79□□□□□ -0.52
PHGDH-216ENST00000641375 TRAV26-1A0A087WT03 109 aa11.78□□□□□ -0.52
PHGDH-216ENST00000641375 BOD1L2Q8IYS8 172 aa11.78□□□□□ -0.52
PHGDH-216ENST00000641375 TP53TG1Q9Y2A0 90 aa11.78□□□□□ -0.52
PHGDH-216ENST00000641375 NEXN-AS1Q8NBZ9 246 aa11.78□□□□□ -0.52
PHGDH-216ENST00000641375 ZNF479Q96JC4 524 aa11.78□□□□□ -0.52
PHGDH-216ENST00000641375 TRAV12-1A0A0B4J245 112 aa11.77□□□□□ -0.53
PHGDH-216ENST00000641375 TSHBP01222 138 aa11.77□□□□□ -0.53
PHGDH-216ENST00000641375 ZMAT4Q9H898 229 aa11.77□□□□□ -0.53
PHGDH-216ENST00000641375 DKK2Q9UBU2 259 aa11.77□□□□□ -0.53
PHGDH-216ENST00000641375 TRGV2A0A075B6R0 118 aa11.77□□□□□ -0.53
PHGDH-216ENST00000641375 A0A087WX48 190 aa11.77□□□□□ -0.53
PHGDH-216ENST00000641375 TMEM141Q96I45 108 aa11.76□□□□□ -0.53
PHGDH-216ENST00000641375 TRBV10-1A0A0K0K1A3 114 aa11.75□□□□□ -0.53
PHGDH-216ENST00000641375 GAGE7O76087 117 aa11.75□□□□□ -0.53
PHGDH-216ENST00000641375 GAGE12FP0CL80 117 aa11.75□□□□□ -0.53
PHGDH-216ENST00000641375 GAGE12GP0CL81 117 aa11.75□□□□□ -0.53
PHGDH-216ENST00000641375 GAGE12IP0CL82 117 aa11.75□□□□□ -0.53
PHGDH-216ENST00000641375 SAMD5Q5TGI4 173 aa11.75□□□□□ -0.53
PHGDH-216ENST00000641375 DEFB104AQ8WTQ1 72 aa11.75□□□□□ -0.53
PHGDH-216ENST00000641375 TIMM17AQ99595 171 aa11.75□□□□□ -0.53
PHGDH-216ENST00000641375 IGIPA6NJ69 53 aa11.75□□□□□ -0.53
PHGDH-216ENST00000641375 DPM2O94777 84 aa11.75□□□□□ -0.53
PHGDH-216ENST00000641375 IGKCP01834 107 aa11.75□□□□□ -0.53
PHGDH-216ENST00000641375 X6R8D5 127 aa11.75□□□□□ -0.53
PHGDH-216ENST00000641375 K7EQD1 137 aa11.74□□□□□ -0.53
PHGDH-216ENST00000641375 RPL39P62891 51 aaKnown RBP11.74□□□□□ -0.53
PHGDH-216ENST00000641375 C20orf203Q8NBC4 194 aa11.74□□□□□ -0.53
PHGDH-216ENST00000641375 BAALCQ8WXS3 180 aa11.74□□□□□ -0.53
PHGDH-216ENST00000641375 NAA38Q9BRA0 125 aaKnown RBP11.74□□□□□ -0.53
PHGDH-216ENST00000641375 STAB1Q9NY15 2570 aa11.74□□□□□ -0.53
PHGDH-216ENST00000641375 Q9UF83 564 aa11.74□□□□□ -0.53
PHGDH-216ENST00000641375 F8W1H4 67 aa11.73□□□□□ -0.53
PHGDH-216ENST00000641375 PLNP26678 52 aa11.73□□□□□ -0.53
PHGDH-216ENST00000641375 EMP1P54849 157 aa11.73□□□□□ -0.53
PHGDH-216ENST00000641375 OXLD1Q5BKU9 147 aa11.73□□□□□ -0.53
PHGDH-216ENST00000641375 SPANXB1Q9NS25 103 aaPredicted RBP11.73□□□□□ -0.53
PHGDH-216ENST00000641375 MRPL35Q9NZE8 188 aaKnown RBP11.73□□□□□ -0.53
PHGDH-216ENST00000641375 TRBV7-3A0A075B6L6 115 aa11.72□□□□□ -0.53
PHGDH-216ENST00000641375 F8VRH5 84 aa11.72□□□□□ -0.53
PHGDH-216ENST00000641375 SMIM13P0DJ93 91 aa11.72□□□□□ -0.53
PHGDH-216ENST00000641375 IGHV4-30-4P0DP06 118 aa11.72□□□□□ -0.53
PHGDH-216ENST00000641375 RPL36AP83881 106 aaKnown RBP11.72□□□□□ -0.53
PHGDH-216ENST00000641375 RPL36ALQ969Q0 106 aaKnown RBP11.72□□□□□ -0.53
PHGDH-216ENST00000641375 RAB37Q96AX2 223 aa11.72□□□□□ -0.53
PHGDH-216ENST00000641375 MAST4O15021 2626 aa11.72□□□□□ -0.53
PHGDH-216ENST00000641375 DEFB135Q30KP9 77 aa11.72□□□□□ -0.53
PHGDH-216ENST00000641375 SLC25A29Q8N8R3 303 aa11.72□□□□□ -0.53
PHGDH-216ENST00000641375 EGFEM1PQ0D2K5 195 aa11.71□□□□□ -0.53
PHGDH-216ENST00000641375 GEMIN7Q9H840 131 aaKnown RBP11.71□□□□□ -0.53
PHGDH-216ENST00000641375 ZNRF2Q8NHG8 242 aa11.71□□□□□ -0.54
PHGDH-216ENST00000641375 HHLA3Q9XRX5 114 aa11.71□□□□□ -0.54
PHGDH-216ENST00000641375 TRBV6-4A0A1B0GX49 114 aa11.7□□□□□ -0.54
PHGDH-216ENST00000641375 LINC00612Q8N6U2 182 aa11.7□□□□□ -0.54
PHGDH-216ENST00000641375 TRGV4A0A0C4DH28 118 aa11.69□□□□□ -0.54
PHGDH-216ENST00000641375 TSPAN13O95857 204 aa11.69□□□□□ -0.54
PHGDH-216ENST00000641375 PMVKQ15126 192 aa11.69□□□□□ -0.54
PHGDH-216ENST00000641375 PRSS29PA6NIE9 313 aa11.69□□□□□ -0.54
PHGDH-216ENST00000641375 DAZ4Q86SG3 579 aaKnown RBP11.69□□□□□ -0.54
PHGDH-216ENST00000641375 OR11H2Q8NH07 326 aa11.69□□□□□ -0.54
PHGDH-216ENST00000641375 DAZ3Q9NR90 486 aaKnown RBP11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms