RNA–Protein interactions for RNA: ENST00000640219.1

HLA-C-210, Transcript of major histocompatibility complex, class I, C, humanhuman

BASIC

Gene HLA-C, Length 976 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-210ENST00000640219 PTTG1IPP53801 180 aa9.63□□□□□ -0.87
HLA-C-210ENST00000640219 KRTAP10-2P60368 255 aa9.63□□□□□ -0.87
HLA-C-210ENST00000640219 FAM222AQ5U5X8 452 aa9.63□□□□□ -0.87
HLA-C-210ENST00000640219 MSRB1Q9NZV6 116 aa9.63□□□□□ -0.87
HLA-C-210ENST00000640219 PRSS47A8MTI9 375 aa9.62□□□□□ -0.87
HLA-C-210ENST00000640219 SNAI2O43623 268 aa9.62□□□□□ -0.87
HLA-C-210ENST00000640219 INSP01308 110 aa9.62□□□□□ -0.87
HLA-C-210ENST00000640219 PRSS1P07477 247 aa9.62□□□□□ -0.87
HLA-C-210ENST00000640219 HTN1P15515 57 aa9.62□□□□□ -0.87
HLA-C-210ENST00000640219 HTN3P15516 51 aa9.62□□□□□ -0.87
HLA-C-210ENST00000640219 S100A4P26447 101 aaKnown RBP9.62□□□□□ -0.87
HLA-C-210ENST00000640219 ASIPP42127 132 aa9.62□□□□□ -0.87
HLA-C-210ENST00000640219 MPV17L2Q567V2 206 aa9.62□□□□□ -0.87
HLA-C-210ENST00000640219 Q5VSD8 79 aa9.62□□□□□ -0.87
HLA-C-210ENST00000640219 A0A096LNJ9 63 aa9.61□□□□□ -0.87
HLA-C-210ENST00000640219 PPP1R17O96001 155 aa9.61□□□□□ -0.87
HLA-C-210ENST00000640219 NPSP0C0P6 89 aa9.61□□□□□ -0.87
HLA-C-210ENST00000640219 SEC11AP67812 179 aa9.61□□□□□ -0.87
HLA-C-210ENST00000640219 UBE2V1Q13404 147 aa9.61□□□□□ -0.87
HLA-C-210ENST00000640219 LAGE3Q14657 143 aa9.61□□□□□ -0.87
HLA-C-210ENST00000640219 BVES-AS1Q5T3Y7 98 aa9.61□□□□□ -0.87
HLA-C-210ENST00000640219 A6NDN8 102 aa9.6□□□□□ -0.87
HLA-C-210ENST00000640219 VAMP3Q15836 100 aa9.6□□□□□ -0.87
HLA-C-210ENST00000640219 RRN3P1Q2M238 152 aa9.6□□□□□ -0.87
HLA-C-210ENST00000640219 TMEM97Q5BJF2 176 aa9.6□□□□□ -0.87
HLA-C-210ENST00000640219 Q6ZQT7 251 aa9.6□□□□□ -0.87
HLA-C-210ENST00000640219 DKK2Q9UBU2 259 aa9.6□□□□□ -0.87
HLA-C-210ENST00000640219 FLG2Q5D862 2391 aaPredicted RBP9.59□□□□□ -0.87
HLA-C-210ENST00000640219 PLAC8L1A1L4L8 177 aa9.59□□□□□ -0.87
HLA-C-210ENST00000640219 J3QL48 77 aa9.59□□□□□ -0.87
HLA-C-210ENST00000640219 EVI2AP22794 236 aa9.59□□□□□ -0.87
HLA-C-210ENST00000640219 AP1S3Q96PC3 154 aa9.59□□□□□ -0.87
HLA-C-210ENST00000640219 LINC01587Q99440 93 aa9.59□□□□□ -0.87
HLA-C-210ENST00000640219 C11orf21Q9P2W6 132 aa9.59□□□□□ -0.87
HLA-C-210ENST00000640219 H3BVH4 76 aa9.58□□□□□ -0.88
HLA-C-210ENST00000640219 K7EMI3 77 aa9.58□□□□□ -0.88
HLA-C-210ENST00000640219 CDKN1BP46527 198 aa9.58□□□□□ -0.88
HLA-C-210ENST00000640219 ORMDL2Q53FV1 153 aa9.58□□□□□ -0.88
HLA-C-210ENST00000640219 PRR9Q5T870 116 aa9.58□□□□□ -0.88
HLA-C-210ENST00000640219 ZNRF2Q8NHG8 242 aa9.58□□□□□ -0.88
HLA-C-210ENST00000640219 DPH3P1Q9H4G8 78 aa9.58□□□□□ -0.88
HLA-C-210ENST00000640219 PHLDA3Q9Y5J5 127 aa9.58□□□□□ -0.88
HLA-C-210ENST00000640219 FAT1Q14517 4588 aa9.57□□□□□ -0.88
HLA-C-210ENST00000640219 TRAV12-3A0A0B4J271 114 aa9.57□□□□□ -0.88
HLA-C-210ENST00000640219 TEX48A0A1B0GUV7 120 aa9.57□□□□□ -0.88
HLA-C-210ENST00000640219 SMIM9A6NGZ8 99 aa9.57□□□□□ -0.88
HLA-C-210ENST00000640219 DPM2O94777 84 aa9.57□□□□□ -0.88
HLA-C-210ENST00000640219 IGKCP01834 107 aa9.57□□□□□ -0.88
HLA-C-210ENST00000640219 RNASE4P34096 147 aaKnown RBP9.57□□□□□ -0.88
HLA-C-210ENST00000640219 HSD52Q0P140 79 aa9.57□□□□□ -0.88
HLA-C-210ENST00000640219 ANKRD39Q53RE8 183 aa9.57□□□□□ -0.88
HLA-C-210ENST00000640219 BOD1L2Q8IYS8 172 aa9.57□□□□□ -0.88
HLA-C-210ENST00000640219 C15orf53Q8NAA6 179 aa9.57□□□□□ -0.88
HLA-C-210ENST00000640219 C20orf78Q9BR46 151 aa9.57□□□□□ -0.88
HLA-C-210ENST00000640219 SMIM17P0DL12 118 aa9.56□□□□□ -0.88
HLA-C-210ENST00000640219 XGP55808 180 aa9.56□□□□□ -0.88
HLA-C-210ENST00000640219 ZFAND2AQ8N6M9 145 aa9.56□□□□□ -0.88
HLA-C-210ENST00000640219 OR4C5Q8NGB2 326 aa9.56□□□□□ -0.88
HLA-C-210ENST00000640219 CBY3A6NI87 242 aa9.55□□□□□ -0.88
HLA-C-210ENST00000640219 LINC01549A6NIU2 74 aa9.55□□□□□ -0.88
HLA-C-210ENST00000640219 M0R381 172 aa9.55□□□□□ -0.88
HLA-C-210ENST00000640219 TAX1BP3O14907 124 aa9.55□□□□□ -0.88
HLA-C-210ENST00000640219 DEFB130BP0DP73 79 aa9.55□□□□□ -0.88
HLA-C-210ENST00000640219 DEFB130AP0DP74 79 aa9.55□□□□□ -0.88
HLA-C-210ENST00000640219 GATA1P15976 413 aaPredicted RBP9.55□□□□□ -0.88
HLA-C-210ENST00000640219 NMUP48645 174 aa9.55□□□□□ -0.88
HLA-C-210ENST00000640219 ANXA2RQ3ZCQ2 193 aa9.55□□□□□ -0.88
HLA-C-210ENST00000640219 NRACQ8N912 160 aa9.55□□□□□ -0.88
HLA-C-210ENST00000640219 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.54□□□□□ -0.88
HLA-C-210ENST00000640219 DAD1P61803 113 aa9.54□□□□□ -0.88
HLA-C-210ENST00000640219 ODF1Q14990 250 aa9.54□□□□□ -0.88
HLA-C-210ENST00000640219 FAM159AQ6UWV7 190 aa9.54□□□□□ -0.88
HLA-C-210ENST00000640219 C2orf91Q6ZV80 131 aa9.54□□□□□ -0.88
HLA-C-210ENST00000640219 FAM19A4Q96LR4 140 aa9.54□□□□□ -0.88
HLA-C-210ENST00000640219 SMIM2Q9BVW6 85 aa9.54□□□□□ -0.88
HLA-C-210ENST00000640219 CBY1Q9Y3M2 126 aa9.54□□□□□ -0.88
HLA-C-210ENST00000640219 H3BRM9 83 aa9.53□□□□□ -0.88
HLA-C-210ENST00000640219 MGPP08493 103 aa9.53□□□□□ -0.88
HLA-C-210ENST00000640219 FGF6P10767 208 aa9.53□□□□□ -0.88
HLA-C-210ENST00000640219 PLNP26678 52 aa9.53□□□□□ -0.88
HLA-C-210ENST00000640219 RNASE8Q8TDE3 154 aaKnown RBP9.53□□□□□ -0.88
HLA-C-210ENST00000640219 NOP10Q9NPE3 64 aaKnown RBP9.53□□□□□ -0.88
HLA-C-210ENST00000640219 MDFICQ9P1T7 246 aa9.53□□□□□ -0.88
HLA-C-210ENST00000640219 HIGD1BQ9P298 99 aa9.53□□□□□ -0.88
HLA-C-210ENST00000640219 VPS13BQ7Z7G8 4022 aa9.53□□□□□ -0.88
HLA-C-210ENST00000640219 A0A087WX48 190 aa9.52□□□□□ -0.89
HLA-C-210ENST00000640219 C7orf71A4D174 169 aa9.52□□□□□ -0.89
HLA-C-210ENST00000640219 CCL25O15444 150 aa9.52□□□□□ -0.89
HLA-C-210ENST00000640219 SUMO2P61956 95 aaKnown RBP9.52□□□□□ -0.89
HLA-C-210ENST00000640219 ODF3Q96PU9 254 aa9.52□□□□□ -0.89
HLA-C-210ENST00000640219 SCGB3A1Q96QR1 104 aa9.52□□□□□ -0.89
HLA-C-210ENST00000640219 TRAV12-1A0A0B4J245 112 aa9.51□□□□□ -0.89
HLA-C-210ENST00000640219 H7C1H1 209 aa9.51□□□□□ -0.89
HLA-C-210ENST00000640219 GAS8-AS1O95177 125 aa9.51□□□□□ -0.89
HLA-C-210ENST00000640219 CCL18P55774 89 aa9.51□□□□□ -0.89
HLA-C-210ENST00000640219 GTF2H5Q6ZYL4 71 aa9.51□□□□□ -0.89
HLA-C-210ENST00000640219 TRAV26-2A0A0B4J265 109 aa9.5□□□□□ -0.89
HLA-C-210ENST00000640219 KLLNB2CW77 178 aa9.5□□□□□ -0.89
HLA-C-210ENST00000640219 C14orf178Q8N769 122 aaPredicted RBP9.5□□□□□ -0.89
HLA-C-210ENST00000640219 SYT8Q8NBV8 401 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms