RNA–Protein interactions for RNA: ENST00000639715.1

SCARB2-218, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,355 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-218ENST00000639715 MED14OSP0DP75 135 aa4.29□□□□□ -1.72
SCARB2-218ENST00000639715 DAD1P61803 113 aa4.29□□□□□ -1.72
SCARB2-218ENST00000639715 SDHAF1A6NFY7 115 aa4.28□□□□□ -1.72
SCARB2-218ENST00000639715 LST1O00453 97 aa4.28□□□□□ -1.72
SCARB2-218ENST00000639715 IGLV2-11P01706 119 aa4.28□□□□□ -1.72
SCARB2-218ENST00000639715 PSMB8P28062 276 aa4.28□□□□□ -1.72
SCARB2-218ENST00000639715 POM121L12Q8N7R1 296 aa4.28□□□□□ -1.72
SCARB2-218ENST00000639715 C5orf56Q8N8D9 126 aa4.28□□□□□ -1.72
SCARB2-218ENST00000639715 RPL39LQ96EH5 51 aaKnown RBP4.28□□□□□ -1.72
SCARB2-218ENST00000639715 SORL1Q92673 2214 aa4.28□□□□□ -1.72
SCARB2-218ENST00000639715 IGHV1OR15-1A0A075B7D0 117 aa4.28□□□□□ -1.72
SCARB2-218ENST00000639715 A0A087WWL8 130 aa4.28□□□□□ -1.72
SCARB2-218ENST00000639715 ZFP36P26651 326 aaKnown RBP4.28□□□□□ -1.72
SCARB2-218ENST00000639715 PRAC2D3DTV9 90 aa4.28□□□□□ -1.72
SCARB2-218ENST00000639715 HOXD3P31249 432 aaPredicted RBP4.28□□□□□ -1.72
SCARB2-218ENST00000639715 PRIMA1Q86XR5 153 aa4.28□□□□□ -1.72
SCARB2-218ENST00000639715 TIRAPP58753 221 aa4.28□□□□□ -1.73
SCARB2-218ENST00000639715 STHQ8IWL8 128 aa4.28□□□□□ -1.73
SCARB2-218ENST00000639715 ELANEP08246 267 aa4.27□□□□□ -1.73
SCARB2-218ENST00000639715 C2orf48Q96LS8 159 aa4.27□□□□□ -1.73
SCARB2-218ENST00000639715 UBL5Q9BZL1 73 aa4.27□□□□□ -1.73
SCARB2-218ENST00000639715 HTTP42858 3142 aa4.27□□□□□ -1.73
SCARB2-218ENST00000639715 K7EMT4 169 aa4.27□□□□□ -1.73
SCARB2-218ENST00000639715 C14orf132Q9NPU4 83 aa4.27□□□□□ -1.73
SCARB2-218ENST00000639715 RPL39P62891 51 aaKnown RBP4.27□□□□□ -1.73
SCARB2-218ENST00000639715 HAMPP81172 84 aa4.27□□□□□ -1.73
SCARB2-218ENST00000639715 SOSTDC1Q6X4U4 206 aa4.27□□□□□ -1.73
SCARB2-218ENST00000639715 CHD7Q9P2D1 2997 aa4.27□□□□□ -1.73
SCARB2-218ENST00000639715 PIEZO2Q9H5I5 2752 aa4.26□□□□□ -1.73
SCARB2-218ENST00000639715 A0A0J9YXV3 536 aa4.26□□□□□ -1.73
SCARB2-218ENST00000639715 ZNF80P51504 273 aaPredicted RBP4.26□□□□□ -1.73
SCARB2-218ENST00000639715 C6orf226Q5I0X4 101 aa4.26□□□□□ -1.73
SCARB2-218ENST00000639715 DAND5Q8N907 189 aa4.26□□□□□ -1.73
SCARB2-218ENST00000639715 SNURFQ9Y675 71 aa4.26□□□□□ -1.73
SCARB2-218ENST00000639715 TMEM223A0PJW6 202 aa4.26□□□□□ -1.73
SCARB2-218ENST00000639715 NXPH4O95158 308 aa4.26□□□□□ -1.73
SCARB2-218ENST00000639715 INSP01308 110 aa4.26□□□□□ -1.73
SCARB2-218ENST00000639715 PRB1P04280 392 aa4.26□□□□□ -1.73
SCARB2-218ENST00000639715 Q9HAA7 133 aa4.26□□□□□ -1.73
SCARB2-218ENST00000639715 A0A0J9YXY3 114 aa4.26□□□□□ -1.73
SCARB2-218ENST00000639715 TMEM89A2RUT3 159 aa4.26□□□□□ -1.73
SCARB2-218ENST00000639715 LMO4P61968 165 aa4.26□□□□□ -1.73
SCARB2-218ENST00000639715 Q8N6K4 173 aa4.26□□□□□ -1.73
SCARB2-218ENST00000639715 BAHCC1Q9P281 2608 aa4.26□□□□□ -1.73
SCARB2-218ENST00000639715 GNRH2O43555 120 aa4.25□□□□□ -1.73
SCARB2-218ENST00000639715 CRPP02741 224 aa4.25□□□□□ -1.73
SCARB2-218ENST00000639715 RPL36AP83881 106 aaKnown RBP4.25□□□□□ -1.73
SCARB2-218ENST00000639715 SPINK13Q1W4C9 94 aa4.25□□□□□ -1.73
SCARB2-218ENST00000639715 Q5XG85 94 aa4.25□□□□□ -1.73
SCARB2-218ENST00000639715 LINC01561Q8N1V8 128 aa4.25□□□□□ -1.73
SCARB2-218ENST00000639715 RPL36ALQ969Q0 106 aaKnown RBP4.25□□□□□ -1.73
SCARB2-218ENST00000639715 VSIG2Q96IQ7 327 aa4.25□□□□□ -1.73
SCARB2-218ENST00000639715 IGHV4-61A0A0C4DH41 118 aa4.25□□□□□ -1.73
SCARB2-218ENST00000639715 XCL1P47992 114 aa4.25□□□□□ -1.73
SCARB2-218ENST00000639715 DEFB131AP59861 70 aa4.25□□□□□ -1.73
SCARB2-218ENST00000639715 C11orf71Q6IPW1 123 aa4.25□□□□□ -1.73
SCARB2-218ENST00000639715 CCDC140Q96MF4 163 aa4.25□□□□□ -1.73
SCARB2-218ENST00000639715 XCL2Q9UBD3 114 aa4.25□□□□□ -1.73
SCARB2-218ENST00000639715 LAMTOR3Q9UHA4 124 aa4.25□□□□□ -1.73
SCARB2-218ENST00000639715 TRGV2A0A075B6R0 118 aa4.25□□□□□ -1.73
SCARB2-218ENST00000639715 GPHB5Q86YW7 130 aa4.25□□□□□ -1.73
SCARB2-218ENST00000639715 OVOL2Q9BRP0 275 aa4.25□□□□□ -1.73
SCARB2-218ENST00000639715 ARHGAP32A7KAX9 2087 aa4.25□□□□□ -1.73
SCARB2-218ENST00000639715 F6UB75 175 aa4.25□□□□□ -1.73
SCARB2-218ENST00000639715 COX7A2LO14548 114 aa4.25□□□□□ -1.73
SCARB2-218ENST00000639715 ZFAND3Q9H8U3 227 aa4.25□□□□□ -1.73
SCARB2-218ENST00000639715 NCOR2Q9Y618 2525 aa4.25□□□□□ -1.73
SCARB2-218ENST00000639715 PTPRBP23467 1997 aa4.24□□□□□ -1.73
SCARB2-218ENST00000639715 TET2Q6N021 2002 aaPredicted RBP4.24□□□□□ -1.73
SCARB2-218ENST00000639715 CHD9Q3L8U1 2897 aa4.24□□□□□ -1.73
SCARB2-218ENST00000639715 IGF1P05019 195 aa4.24□□□□□ -1.73
SCARB2-218ENST00000639715 Q6ZSV7 163 aa4.24□□□□□ -1.73
SCARB2-218ENST00000639715 F8WEM9 126 aa4.24□□□□□ -1.73
SCARB2-218ENST00000639715 TSPEAR-AS2P59090 65 aa4.24□□□□□ -1.73
SCARB2-218ENST00000639715 MRPS36P82909 103 aaKnown RBP4.24□□□□□ -1.73
SCARB2-218ENST00000639715 Q6JHZ5 121 aa4.24□□□□□ -1.73
SCARB2-218ENST00000639715 ENHOQ6UWT2 76 aa4.24□□□□□ -1.73
SCARB2-218ENST00000639715 NRACQ8N912 160 aa4.24□□□□□ -1.73
SCARB2-218ENST00000639715 CNFNQ9BYD5 112 aa4.24□□□□□ -1.73
SCARB2-218ENST00000639715 IGHV4-38-2P0DP08 117 aa4.23□□□□□ -1.73
SCARB2-218ENST00000639715 BLCAPP62952 87 aa4.23□□□□□ -1.73
SCARB2-218ENST00000639715 COX8CQ7Z4L0 72 aa4.23□□□□□ -1.73
SCARB2-218ENST00000639715 C5orf38Q86SI9 138 aa4.23□□□□□ -1.73
SCARB2-218ENST00000639715 TIMM17AQ99595 171 aa4.23□□□□□ -1.73
SCARB2-218ENST00000639715 OPRPNQ99935 248 aaPredicted RBP4.23□□□□□ -1.73
SCARB2-218ENST00000639715 KLK9Q9UKQ9 250 aa4.23□□□□□ -1.73
SCARB2-218ENST00000639715 SMAD5-AS1Q9Y6J3 95 aa4.23□□□□□ -1.73
SCARB2-218ENST00000639715 CSPG4Q6UVK1 2322 aa4.23□□□□□ -1.73
SCARB2-218ENST00000639715 IGHV3-73A0A0B4J1V6 119 aa4.23□□□□□ -1.73
SCARB2-218ENST00000639715 A6NDX4 124 aa4.23□□□□□ -1.73
SCARB2-218ENST00000639715 WFDC9Q8NEX5 89 aa4.23□□□□□ -1.73
SCARB2-218ENST00000639715 IGHV3-30-3P0DP02 117 aa4.23□□□□□ -1.73
SCARB2-218ENST00000639715 FHL2Q14192 279 aa4.23□□□□□ -1.73
SCARB2-218ENST00000639715 SMCR5Q8TEV8 140 aa4.23□□□□□ -1.73
SCARB2-218ENST00000639715 TRGV1A0A0A0MS02 117 aa4.23□□□□□ -1.73
SCARB2-218ENST00000639715 DEFB112Q30KQ8 113 aa4.23□□□□□ -1.73
SCARB2-218ENST00000639715 SUMO4Q6EEV6 95 aa4.23□□□□□ -1.73
SCARB2-218ENST00000639715 TRGV4A0A0C4DH28 118 aa4.22□□□□□ -1.73
SCARB2-218ENST00000639715 TRBV7-6A0A0J9YX20 115 aa4.22□□□□□ -1.73
SCARB2-218ENST00000639715 IGHV4-59P01825 116 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 133.3 ms