RNA–Protein interactions for RNA: ENST00000638142.2

SYNGAP1-227, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 2,499 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-227ENST00000638142 H7C2G1 150 aa14.68□□□□□ -0.06
SYNGAP1-227ENST00000638142 Q1RN00 199 aa14.68□□□□□ -0.06
SYNGAP1-227ENST00000638142 DUX3Q96PT4 197 aa14.68□□□□□ -0.06
SYNGAP1-227ENST00000638142 IGSF10Q6WRI0 2623 aa14.68□□□□□ -0.06
SYNGAP1-227ENST00000638142 A0A096LNT2 108 aa14.68□□□□□ -0.06
SYNGAP1-227ENST00000638142 ZNF415Q09FC8 603 aa14.68□□□□□ -0.06
SYNGAP1-227ENST00000638142 ATXN8Q156A1 80 aa14.68□□□□□ -0.06
SYNGAP1-227ENST00000638142 ZFAND6Q6FIF0 208 aa14.68□□□□□ -0.06
SYNGAP1-227ENST00000638142 CITED1Q99966 193 aa14.68□□□□□ -0.06
SYNGAP1-227ENST00000638142 SORL1Q92673 2214 aa14.67□□□□□ -0.06
SYNGAP1-227ENST00000638142 TINCRA0A1B0GVN0 87 aa14.67□□□□□ -0.06
SYNGAP1-227ENST00000638142 CEMP1Q6PRD7 247 aaPredicted RBP14.67□□□□□ -0.06
SYNGAP1-227ENST00000638142 NRGNQ92686 78 aa14.67□□□□□ -0.06
SYNGAP1-227ENST00000638142 SPANXDQ9BXN6 97 aa14.67□□□□□ -0.06
SYNGAP1-227ENST00000638142 SPANXCQ9NY87 97 aa14.67□□□□□ -0.06
SYNGAP1-227ENST00000638142 TRAV8-3A0A0A6YYJ7 113 aa14.66□□□□□ -0.06
SYNGAP1-227ENST00000638142 TRBV30A0A0K0K1B3 111 aa14.66□□□□□ -0.06
SYNGAP1-227ENST00000638142 Q6YL49 198 aa14.66□□□□□ -0.06
SYNGAP1-227ENST00000638142 CHCHD7Q9BUK0 85 aa14.66□□□□□ -0.06
SYNGAP1-227ENST00000638142 DOPEY1Q5JWR5 2465 aa14.66□□□□□ -0.06
SYNGAP1-227ENST00000638142 ADARB2-AS1A8MUL3 147 aa14.66□□□□□ -0.06
SYNGAP1-227ENST00000638142 LINC01620Q4KN68 170 aa14.66□□□□□ -0.06
SYNGAP1-227ENST00000638142 RNF183Q96D59 192 aa14.66□□□□□ -0.06
SYNGAP1-227ENST00000638142 NDUFA12Q9UI09 145 aa14.66□□□□□ -0.06
SYNGAP1-227ENST00000638142 UBE2D4Q9Y2X8 147 aa14.66□□□□□ -0.06
SYNGAP1-227ENST00000638142 RBMY1BA6NDE4 496 aaKnown RBP14.65□□□□□ -0.06
SYNGAP1-227ENST00000638142 RBMY1EA6NEQ0 496 aaKnown RBP14.65□□□□□ -0.06
SYNGAP1-227ENST00000638142 RBMY1DP0C7P1 496 aaKnown RBP14.65□□□□□ -0.06
SYNGAP1-227ENST00000638142 TEX29Q8N6K0 151 aa14.65□□□□□ -0.06
SYNGAP1-227ENST00000638142 VSIG2Q96IQ7 327 aa14.65□□□□□ -0.06
SYNGAP1-227ENST00000638142 FAM208BQ5VWN6 2430 aa14.64□□□□□ -0.07
SYNGAP1-227ENST00000638142 CELSR2Q9HCU4 2923 aa14.64□□□□□ -0.07
SYNGAP1-227ENST00000638142 SLURP1P55000 103 aa14.64□□□□□ -0.07
SYNGAP1-227ENST00000638142 MAP1AP78559 2803 aaPredicted RBP14.64□□□□□ -0.07
SYNGAP1-227ENST00000638142 RNASE13Q5GAN3 156 aaKnown RBP14.64□□□□□ -0.07
SYNGAP1-227ENST00000638142 FSHBP01225 129 aa14.63□□□□□ -0.07
SYNGAP1-227ENST00000638142 PRSS2P07478 247 aa14.63□□□□□ -0.07
SYNGAP1-227ENST00000638142 RPL13AP40429 203 aaKnown RBP14.63□□□□□ -0.07
SYNGAP1-227ENST00000638142 Q6ZSN1 163 aa14.63□□□□□ -0.07
SYNGAP1-227ENST00000638142 NTN5Q8WTR8 489 aaPredicted RBP14.63□□□□□ -0.07
SYNGAP1-227ENST00000638142 DNAJC30Q96LL9 226 aa14.63□□□□□ -0.07
SYNGAP1-227ENST00000638142 ANAPC13Q9BS18 74 aa14.63□□□□□ -0.07
SYNGAP1-227ENST00000638142 MIAQ16674 131 aa14.63□□□□□ -0.07
SYNGAP1-227ENST00000638142 LINC00467Q9BRT7 94 aa14.62□□□□□ -0.07
SYNGAP1-227ENST00000638142 TRBV10-2A0A0K0K1G8 114 aa14.61□□□□□ -0.07
SYNGAP1-227ENST00000638142 TRIAP1O43715 76 aa14.61□□□□□ -0.07
SYNGAP1-227ENST00000638142 DEFB136Q30KP8 78 aa14.61□□□□□ -0.07
SYNGAP1-227ENST00000638142 PEMTQ9UBM1 199 aa14.61□□□□□ -0.07
SYNGAP1-227ENST00000638142 Q9UF83 564 aa14.61□□□□□ -0.07
SYNGAP1-227ENST00000638142 NACAE9PAV3 2078 aa14.61□□□□□ -0.07
SYNGAP1-227ENST00000638142 PRRC2AP48634 2157 aaKnown RBP14.61□□□□□ -0.07
SYNGAP1-227ENST00000638142 IGHV3-53P01767 116 aa14.61□□□□□ -0.07
SYNGAP1-227ENST00000638142 PRM2P04554 102 aa14.61□□□□□ -0.07
SYNGAP1-227ENST00000638142 ADAMTSL4-AS1Q5T5F5 129 aa14.61□□□□□ -0.07
SYNGAP1-227ENST00000638142 TMEM61Q8N0U2 210 aa14.6□□□□□ -0.07
SYNGAP1-227ENST00000638142 IGKV2D-29A0A075B6S2 120 aaPredicted RBP14.6□□□□□ -0.07
SYNGAP1-227ENST00000638142 IGKV2-29A2NJV5 120 aaPredicted RBP14.6□□□□□ -0.07
SYNGAP1-227ENST00000638142 CRYBG3Q68DQ2 2970 aa14.6□□□□□ -0.07
SYNGAP1-227ENST00000638142 C18orf65Q6ZTR6 163 aa14.59□□□□□ -0.07
SYNGAP1-227ENST00000638142 C11orf72Q8NBR9 251 aa14.59□□□□□ -0.07
SYNGAP1-227ENST00000638142 MAPK1IP1LQ8NDC0 245 aa14.59□□□□□ -0.07
SYNGAP1-227ENST00000638142 CREBBPQ92793 2442 aa14.59□□□□□ -0.07
SYNGAP1-227ENST00000638142 BEAN1Q3B7T3 259 aa14.59□□□□□ -0.07
SYNGAP1-227ENST00000638142 YAE1D1Q9NRH1 226 aa14.59□□□□□ -0.07
SYNGAP1-227ENST00000638142 BEX4Q9NWD9 120 aaPredicted RBP14.59□□□□□ -0.07
SYNGAP1-227ENST00000638142 TIMM17BO60830 172 aa14.58□□□□□ -0.07
SYNGAP1-227ENST00000638142 SVIPQ8NHG7 77 aa14.58□□□□□ -0.07
SYNGAP1-227ENST00000638142 LINC01587Q99440 93 aa14.58□□□□□ -0.07
SYNGAP1-227ENST00000638142 MAP6D1Q9H9H5 199 aa14.58□□□□□ -0.07
SYNGAP1-227ENST00000638142 ICOSQ9Y6W8 199 aa14.58□□□□□ -0.07
SYNGAP1-227ENST00000638142 SNCGO76070 127 aa14.58□□□□□ -0.08
SYNGAP1-227ENST00000638142 GAGE2BQ13066 116 aa14.57□□□□□ -0.08
SYNGAP1-227ENST00000638142 GAGE2EQ4V326 116 aa14.57□□□□□ -0.08
SYNGAP1-227ENST00000638142 GAGE2DQ9UEU5 116 aa14.57□□□□□ -0.08
SYNGAP1-227ENST00000638142 CFAP46Q8IYW2 2715 aa14.57□□□□□ -0.08
SYNGAP1-227ENST00000638142 INSP01308 110 aa14.56□□□□□ -0.08
SYNGAP1-227ENST00000638142 COX6CP09669 75 aa14.56□□□□□ -0.08
SYNGAP1-227ENST00000638142 Q8N2B8 174 aa14.56□□□□□ -0.08
SYNGAP1-227ENST00000638142 TEX49A0A1B0GTD5 131 aa14.56□□□□□ -0.08
SYNGAP1-227ENST00000638142 RS1O15537 224 aa14.56□□□□□ -0.08
SYNGAP1-227ENST00000638142 IFITM1P13164 125 aa14.56□□□□□ -0.08
SYNGAP1-227ENST00000638142 TIRAPP58753 221 aa14.56□□□□□ -0.08
SYNGAP1-227ENST00000638142 IGLV5-45A0A087WSX0 123 aa14.55□□□□□ -0.08
SYNGAP1-227ENST00000638142 A8MZ25 164 aa14.55□□□□□ -0.08
SYNGAP1-227ENST00000638142 Q6Q795 121 aa14.55□□□□□ -0.08
SYNGAP1-227ENST00000638142 C4orf3Q8WVX3 66 aa14.55□□□□□ -0.08
SYNGAP1-227ENST00000638142 USP9XQ93008 2570 aaPredicted RBP14.55□□□□□ -0.08
SYNGAP1-227ENST00000638142 TRAV8-4A0A0B4J246 113 aa14.55□□□□□ -0.08
SYNGAP1-227ENST00000638142 IGHV3-38A0A0C4DH36 116 aa14.55□□□□□ -0.08
SYNGAP1-227ENST00000638142 NHLRC4P0CG21 123 aaPredicted RBP14.55□□□□□ -0.08
SYNGAP1-227ENST00000638142 DYNLRB2Q8TF09 96 aa14.55□□□□□ -0.08
SYNGAP1-227ENST00000638142 UBE2WQ96B02 151 aa14.55□□□□□ -0.08
SYNGAP1-227ENST00000638142 GAGE5Q13069 117 aa14.54□□□□□ -0.08
SYNGAP1-227ENST00000638142 GAGE6Q13070 117 aa14.54□□□□□ -0.08
SYNGAP1-227ENST00000638142 TRAV4A0A0B4J268 109 aa14.54□□□□□ -0.08
SYNGAP1-227ENST00000638142 IGHV4-31P0DP07 118 aa14.54□□□□□ -0.08
SYNGAP1-227ENST00000638142 CDKN2A-AS1Q9UH64 79 aa14.54□□□□□ -0.08
SYNGAP1-227ENST00000638142 NDUFA1O15239 70 aa14.53□□□□□ -0.08
SYNGAP1-227ENST00000638142 FLNCQ14315 2725 aa14.53□□□□□ -0.08
SYNGAP1-227ENST00000638142 H3BT86 120 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms