RNA–Protein interactions for RNA: ENST00000635273.1

SMARCA2-238, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, human

TSL 5

Gene SMARCA2, Length 672 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMARCA2-238	ENST00000635273	SPINK13	Q1W4C9	94 aa		3.36	□□□□□ -1.87
SMARCA2-238	ENST00000635273	PYDC2	Q56P42	97 aa		3.36	□□□□□ -1.87
SMARCA2-238	ENST00000635273	TMEM229B	Q8NBD8	167 aa		3.36	□□□□□ -1.87
SMARCA2-238	ENST00000635273	EIF5A2	Q9GZV4	153 aa	Known RBP	3.36	□□□□□ -1.87
SMARCA2-238	ENST00000635273	NAA60	Q9H7X0	242 aa		3.36	□□□□□ -1.87
SMARCA2-238	ENST00000635273	RPRM	Q9NS64	109 aa		3.36	□□□□□ -1.87
SMARCA2-238	ENST00000635273	MRPS16	Q9Y3D3	137 aa	Known RBP	3.36	□□□□□ -1.87
SMARCA2-238	ENST00000635273		U3KQ87	197 aa		3.36	□□□□□ -1.87
SMARCA2-238	ENST00000635273	DISC1	C4P0D8	188 aa		3.35	□□□□□ -1.87
SMARCA2-238	ENST00000635273	GABARAP	H6UMI1	98 aa		3.35	□□□□□ -1.87
SMARCA2-238	ENST00000635273	SYNGR2	O43760	224 aa		3.35	□□□□□ -1.87
SMARCA2-238	ENST00000635273	CCL18	P55774	89 aa		3.35	□□□□□ -1.87
SMARCA2-238	ENST00000635273	LINC00313	P59037	77 aa		3.35	□□□□□ -1.87
SMARCA2-238	ENST00000635273	SUPT4H1	P63272	117 aa	Known RBP	3.35	□□□□□ -1.87
SMARCA2-238	ENST00000635273	NMS	Q5H8A3	153 aa		3.35	□□□□□ -1.87
SMARCA2-238	ENST00000635273	LCE1C	Q5T751	118 aa		3.35	□□□□□ -1.87
SMARCA2-238	ENST00000635273	LCE1B	Q5T7P3	118 aa		3.35	□□□□□ -1.87
SMARCA2-238	ENST00000635273	SCX	Q7RTU7	201 aa		3.35	□□□□□ -1.87
SMARCA2-238	ENST00000635273	ATP5L2	Q7Z4Y8	100 aa		3.35	□□□□□ -1.87
SMARCA2-238	ENST00000635273	SPATA12	Q7Z6I5	190 aa		3.35	□□□□□ -1.87
SMARCA2-238	ENST00000635273	CLVS1	Q8IUQ0	354 aa	Predicted RBP	3.35	□□□□□ -1.87
SMARCA2-238	ENST00000635273	TVP23C	Q96ET8	276 aa		3.35	□□□□□ -1.87
SMARCA2-238	ENST00000635273	DOK5	Q9P104	306 aa		3.35	□□□□□ -1.87
SMARCA2-238	ENST00000635273	TMEM56-RWDD3	S4R434	201 aa		3.35	□□□□□ -1.87
SMARCA2-238	ENST00000635273	CRYM-AS1	A6NIL9	109 aa		3.34	□□□□□ -1.87
SMARCA2-238	ENST00000635273	IGLV6-57	P01721	117 aa		3.34	□□□□□ -1.87
SMARCA2-238	ENST00000635273	FABP1	P07148	127 aa		3.34	□□□□□ -1.87
SMARCA2-238	ENST00000635273	AKAIN1	P0CW23	69 aa		3.34	□□□□□ -1.87
SMARCA2-238	ENST00000635273	IAPP	P10997	89 aa		3.34	□□□□□ -1.87
SMARCA2-238	ENST00000635273	FUS	P35637	526 aa	Known RBP eCLIP	3.34	□□□□□ -1.87
SMARCA2-238	ENST00000635273	KRTAP10-10	P60014	251 aa		3.34	□□□□□ -1.87
SMARCA2-238	ENST00000635273	RHOB	P62745	196 aa		3.34	□□□□□ -1.87
SMARCA2-238	ENST00000635273	SMCO1	Q147U7	214 aa		3.34	□□□□□ -1.87
SMARCA2-238	ENST00000635273	C1orf194	Q5T5A4	169 aa		3.34	□□□□□ -1.87
SMARCA2-238	ENST00000635273	AMTN	Q6UX39	209 aa		3.34	□□□□□ -1.87
SMARCA2-238	ENST00000635273	UNQ5830/PRO19650/PRO19816	Q6UY13	95 aa		3.34	□□□□□ -1.87
SMARCA2-238	ENST00000635273	BAP18	Q8IXM2	172 aa		3.34	□□□□□ -1.87
SMARCA2-238	ENST00000635273	ZFAND2A	Q8N6M9	145 aa		3.34	□□□□□ -1.87
SMARCA2-238	ENST00000635273	C15orf53	Q8NAA6	179 aa		3.34	□□□□□ -1.87
SMARCA2-238	ENST00000635273	OR4C16	Q8NGL9	310 aa		3.34	□□□□□ -1.87
SMARCA2-238	ENST00000635273	MIXL1	Q9H2W2	232 aa		3.34	□□□□□ -1.87
SMARCA2-238	ENST00000635273	HSPG2	P98160	4391 aa		3.34	□□□□□ -1.87
SMARCA2-238	ENST00000635273	DNAH11	Q96DT5	4516 aa		3.34	□□□□□ -1.88
SMARCA2-238	ENST00000635273		A0A0J9YY99	117 aa		3.33	□□□□□ -1.88
SMARCA2-238	ENST00000635273	ATP5G3	P48201	142 aa		3.33	□□□□□ -1.88
SMARCA2-238	ENST00000635273	HIST1H1A	Q02539	215 aa	Predicted RBP	3.33	□□□□□ -1.88
SMARCA2-238	ENST00000635273	SURF2	Q15527	256 aa	Predicted RBP	3.33	□□□□□ -1.88
SMARCA2-238	ENST00000635273	AP3S1	Q92572	193 aa		3.33	□□□□□ -1.88
SMARCA2-238	ENST00000635273	DIRAS2	Q96HU8	199 aa		3.33	□□□□□ -1.88
SMARCA2-238	ENST00000635273	TRGV9	Q99603	122 aa		3.33	□□□□□ -1.88
SMARCA2-238	ENST00000635273	PRRT1	Q99946	306 aa		3.33	□□□□□ -1.88
SMARCA2-238	ENST00000635273	MAP1LC3A	Q9H492	121 aa		3.33	□□□□□ -1.88
SMARCA2-238	ENST00000635273	NOP10	Q9NPE3	64 aa	Known RBP	3.33	□□□□□ -1.88
SMARCA2-238	ENST00000635273	CACFD1	Q9UGQ2	172 aa		3.33	□□□□□ -1.88
SMARCA2-238	ENST00000635273	CARHSP1	Q9Y2V2	147 aa	Known RBP	3.33	□□□□□ -1.88
SMARCA2-238	ENST00000635273	ABCA13	Q86UQ4	5058 aa		3.33	□□□□□ -1.88
SMARCA2-238	ENST00000635273	LINC00862	A6NCI5	91 aa		3.32	□□□□□ -1.88
SMARCA2-238	ENST00000635273	IL5	P05113	134 aa		3.32	□□□□□ -1.88
SMARCA2-238	ENST00000635273	OR5G3	P0C626	314 aa		3.32	□□□□□ -1.88
SMARCA2-238	ENST00000635273	ZNF22	P17026	224 aa	Predicted RBP	3.32	□□□□□ -1.88
SMARCA2-238	ENST00000635273	HERVK_113	P63121	156 aa		3.32	□□□□□ -1.88
SMARCA2-238	ENST00000635273	AKR1C1	Q04828	323 aa		3.32	□□□□□ -1.88
SMARCA2-238	ENST00000635273	SSBP1	Q04837	148 aa	Known RBP	3.32	□□□□□ -1.88
SMARCA2-238	ENST00000635273	PPP1R1A	Q13522	171 aa		3.32	□□□□□ -1.88
SMARCA2-238	ENST00000635273	ESRG	Q1W209	222 aa		3.32	□□□□□ -1.88
SMARCA2-238	ENST00000635273	SPANXN5	Q5MJ07	72 aa		3.32	□□□□□ -1.88
SMARCA2-238	ENST00000635273	TMED4	Q7Z7H5	227 aa		3.32	□□□□□ -1.88
SMARCA2-238	ENST00000635273	CMTM2	Q8TAZ6	248 aa		3.32	□□□□□ -1.88
SMARCA2-238	ENST00000635273	SMIM4	Q8WVI0	70 aa		3.32	□□□□□ -1.88
SMARCA2-238	ENST00000635273	GNPNAT1	Q96EK6	184 aa	Predicted RBP	3.32	□□□□□ -1.88
SMARCA2-238	ENST00000635273	TMEM147	Q9BVK8	224 aa		3.32	□□□□□ -1.88
SMARCA2-238	ENST00000635273	PARD6G	Q9BYG4	376 aa	Predicted RBP	3.32	□□□□□ -1.88
SMARCA2-238	ENST00000635273	SCP2D1	Q9UJQ7	156 aa		3.32	□□□□□ -1.88
SMARCA2-238	ENST00000635273	PSCA	O43653	123 aa		3.31	□□□□□ -1.88
SMARCA2-238	ENST00000635273	PITX3	O75364	302 aa		3.31	□□□□□ -1.88
SMARCA2-238	ENST00000635273	CFD	P00746	253 aa	Predicted RBP	3.31	□□□□□ -1.88
SMARCA2-238	ENST00000635273	KRTAP10-1	P60331	282 aa		3.31	□□□□□ -1.88
SMARCA2-238	ENST00000635273	SPCS2	Q15005	226 aa		3.31	□□□□□ -1.88
SMARCA2-238	ENST00000635273	SAMD13	Q5VXD3	122 aa		3.31	□□□□□ -1.88
SMARCA2-238	ENST00000635273	HIGD1A	Q9Y241	93 aa		3.31	□□□□□ -1.88
SMARCA2-238	ENST00000635273	TIMM8B	Q9Y5J9	83 aa	Predicted RBP	3.31	□□□□□ -1.88
SMARCA2-238	ENST00000635273	TRAV12-3	A0A0B4J271	114 aa		3.3	□□□□□ -1.88
SMARCA2-238	ENST00000635273	IGSF23	A1L1A6	192 aa		3.3	□□□□□ -1.88
SMARCA2-238	ENST00000635273		A8MTW9	85 aa		3.3	□□□□□ -1.88
SMARCA2-238	ENST00000635273	HYPM	O75409	117 aa		3.3	□□□□□ -1.88
SMARCA2-238	ENST00000635273	SMR3B	P02814	79 aa	Predicted RBP	3.3	□□□□□ -1.88
SMARCA2-238	ENST00000635273		P0C880	135 aa		3.3	□□□□□ -1.88
SMARCA2-238	ENST00000635273	RPL7	P18124	248 aa	Known RBP	3.3	□□□□□ -1.88
SMARCA2-238	ENST00000635273	RRAS2	P62070	204 aa	Predicted RBP	3.3	□□□□□ -1.88
SMARCA2-238	ENST00000635273	MRPS10	P82664	201 aa	Known RBP	3.3	□□□□□ -1.88
SMARCA2-238	ENST00000635273	TMEM128	Q5BJH2	165 aa		3.3	□□□□□ -1.88
SMARCA2-238	ENST00000635273	PATE2	Q6UY27	113 aa		3.3	□□□□□ -1.88
SMARCA2-238	ENST00000635273	CYP2G1P	Q6ZSU1	146 aa		3.3	□□□□□ -1.88
SMARCA2-238	ENST00000635273	HIGD2A	Q9BW72	106 aa		3.3	□□□□□ -1.88
SMARCA2-238	ENST00000635273		A0A096LPF7	62 aa		3.29	□□□□□ -1.88
SMARCA2-238	ENST00000635273	TRAV8-1	A0A0A6YYK1	113 aa		3.29	□□□□□ -1.88
SMARCA2-238	ENST00000635273		H3BRN7	92 aa		3.29	□□□□□ -1.88
SMARCA2-238	ENST00000635273		H7BYZ3	331 aa		3.29	□□□□□ -1.88
SMARCA2-238	ENST00000635273	CRYGD	P07320	174 aa		3.29	□□□□□ -1.88
SMARCA2-238	ENST00000635273	RPL12	P30050	165 aa	Known RBP	3.29	□□□□□ -1.88

Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms