RNA–Protein interactions for RNA: ENST00000634433.1

BRCA1-230, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 2,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-230ENST00000634433 SORL1Q92673 2214 aa5.24□□□□□ -1.57
BRCA1-230ENST00000634433 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.24□□□□□ -1.57
BRCA1-230ENST00000634433 H7C1H1 209 aa5.24□□□□□ -1.57
BRCA1-230ENST00000634433 TRIAP1O43715 76 aa5.24□□□□□ -1.57
BRCA1-230ENST00000634433 SUMO4Q6EEV6 95 aa5.24□□□□□ -1.57
BRCA1-230ENST00000634433 TRPT1Q86TN4 253 aaKnown RBP5.24□□□□□ -1.57
BRCA1-230ENST00000634433 NDUFA11Q86Y39 141 aa5.24□□□□□ -1.57
BRCA1-230ENST00000634433 TOMM6Q96B49 74 aa5.24□□□□□ -1.57
BRCA1-230ENST00000634433 RPL39LQ96EH5 51 aaKnown RBP5.24□□□□□ -1.57
BRCA1-230ENST00000634433 C18orf15Q96N68 181 aa5.24□□□□□ -1.57
BRCA1-230ENST00000634433 LINC01587Q99440 93 aa5.24□□□□□ -1.57
BRCA1-230ENST00000634433 KIR2DL4Q99706 377 aa5.24□□□□□ -1.57
BRCA1-230ENST00000634433 A8MWV9 139 aa5.23□□□□□ -1.57
BRCA1-230ENST00000634433 M0R2P5 195 aa5.23□□□□□ -1.57
BRCA1-230ENST00000634433 SCGB3A1Q96QR1 104 aa5.23□□□□□ -1.57
BRCA1-230ENST00000634433 TM2D2Q9BX73 214 aa5.23□□□□□ -1.57
BRCA1-230ENST00000634433 NIPBLQ6KC79 2804 aaeCLIP5.23□□□□□ -1.57
BRCA1-230ENST00000634433 TRAV12-1A0A0B4J245 112 aa5.23□□□□□ -1.57
BRCA1-230ENST00000634433 RBMY1BA6NDE4 496 aaKnown RBP5.23□□□□□ -1.57
BRCA1-230ENST00000634433 RBMY1EA6NEQ0 496 aaKnown RBP5.23□□□□□ -1.57
BRCA1-230ENST00000634433 DPM2O94777 84 aa5.23□□□□□ -1.57
BRCA1-230ENST00000634433 CRYGDP07320 174 aa5.23□□□□□ -1.57
BRCA1-230ENST00000634433 RBMY1DP0C7P1 496 aaKnown RBP5.23□□□□□ -1.57
BRCA1-230ENST00000634433 COX8AP10176 69 aa5.23□□□□□ -1.57
BRCA1-230ENST00000634433 POLR2KP53803 58 aaKnown RBP5.23□□□□□ -1.57
BRCA1-230ENST00000634433 ZNF56Q15929 161 aa5.23□□□□□ -1.57
BRCA1-230ENST00000634433 NSUN5P1Q3KNT7 163 aa5.23□□□□□ -1.57
BRCA1-230ENST00000634433 ODF3L2Q3SX64 289 aa5.23□□□□□ -1.57
BRCA1-230ENST00000634433 COL5A1-AS1Q5SY13 56 aa5.23□□□□□ -1.57
BRCA1-230ENST00000634433 JPT2Q9H910 190 aa5.23□□□□□ -1.57
BRCA1-230ENST00000634433 MUC4Q99102 2169 aa5.22□□□□□ -1.57
BRCA1-230ENST00000634433 AGRNO00468 2067 aa5.22□□□□□ -1.57
BRCA1-230ENST00000634433 IGKCP01834 107 aa5.22□□□□□ -1.57
BRCA1-230ENST00000634433 HTN1P15515 57 aa5.22□□□□□ -1.57
BRCA1-230ENST00000634433 AZU1P20160 251 aa5.22□□□□□ -1.57
BRCA1-230ENST00000634433 FAM74A4Q5TZK3 123 aa5.22□□□□□ -1.57
BRCA1-230ENST00000634433 OVOL2Q9BRP0 275 aa5.22□□□□□ -1.57
BRCA1-230ENST00000634433 EDA2RQ9HAV5 297 aa5.22□□□□□ -1.57
BRCA1-230ENST00000634433 RBMY1A1P0DJD3 496 aaKnown RBP5.22□□□□□ -1.57
BRCA1-230ENST00000634433 RBMY1CP0DJD4 496 aa5.22□□□□□ -1.57
BRCA1-230ENST00000634433 RBMY1FQ15415 496 aaKnown RBP5.22□□□□□ -1.57
BRCA1-230ENST00000634433 FAM19A5Q7Z5A7 132 aaPredicted RBP5.22□□□□□ -1.57
BRCA1-230ENST00000634433 DKK2Q9UBU2 259 aa5.22□□□□□ -1.57
BRCA1-230ENST00000634433 CYSLTR1Q9Y271 337 aa5.22□□□□□ -1.57
BRCA1-230ENST00000634433 TRBV27A0A0K0K1C4 114 aa5.21□□□□□ -1.58
BRCA1-230ENST00000634433 SDHAF1A6NFY7 115 aa5.21□□□□□ -1.58
BRCA1-230ENST00000634433 M0QY20 66 aa5.21□□□□□ -1.58
BRCA1-230ENST00000634433 IGLV1-51P01701 117 aa5.21□□□□□ -1.58
BRCA1-230ENST00000634433 PLNP26678 52 aa5.21□□□□□ -1.58
BRCA1-230ENST00000634433 BATFQ16520 125 aa5.21□□□□□ -1.58
BRCA1-230ENST00000634433 TMEM97Q5BJF2 176 aa5.21□□□□□ -1.58
BRCA1-230ENST00000634433 C2orf66Q6UXQ4 117 aa5.21□□□□□ -1.58
BRCA1-230ENST00000634433 RHOHQ15669 191 aa5.21□□□□□ -1.58
BRCA1-230ENST00000634433 TMEM141Q96I45 108 aa5.21□□□□□ -1.58
BRCA1-230ENST00000634433 K7ERU9 68 aa5.2□□□□□ -1.58
BRCA1-230ENST00000634433 APOC4P55056 127 aa5.2□□□□□ -1.58
BRCA1-230ENST00000634433 BEAN1Q3B7T3 259 aa5.2□□□□□ -1.58
BRCA1-230ENST00000634433 Q75L30 129 aa5.2□□□□□ -1.58
BRCA1-230ENST00000634433 OR13C6PQ8NH95 151 aa5.2□□□□□ -1.58
BRCA1-230ENST00000634433 XCL2Q9UBD3 114 aa5.2□□□□□ -1.58
BRCA1-230ENST00000634433 I3L3M4 83 aa5.2□□□□□ -1.58
BRCA1-230ENST00000634433 MORN3Q6PF18 240 aaPredicted RBP5.2□□□□□ -1.58
BRCA1-230ENST00000634433 ZFP2Q6ZN57 461 aa5.2□□□□□ -1.58
BRCA1-230ENST00000634433 STPG4Q8N801 248 aa5.2□□□□□ -1.58
BRCA1-230ENST00000634433 C1QTNF4Q9BXJ3 329 aa5.2□□□□□ -1.58
BRCA1-230ENST00000634433 CST9LQ9H4G1 147 aa5.2□□□□□ -1.58
BRCA1-230ENST00000634433 F8VRH5 84 aa5.19□□□□□ -1.58
BRCA1-230ENST00000634433 TIMM17AQ99595 171 aa5.19□□□□□ -1.58
BRCA1-230ENST00000634433 HINT1P49773 126 aaPredicted RBP5.19□□□□□ -1.58
BRCA1-230ENST00000634433 INSL3P51460 131 aa5.19□□□□□ -1.58
BRCA1-230ENST00000634433 C11orf72Q8NBR9 251 aa5.19□□□□□ -1.58
BRCA1-230ENST00000634433 NEXN-AS1Q8NBZ9 246 aa5.19□□□□□ -1.58
BRCA1-230ENST00000634433 DNAJC30Q96LL9 226 aa5.19□□□□□ -1.58
BRCA1-230ENST00000634433 MRPL35Q9NZE8 188 aaKnown RBP5.19□□□□□ -1.58
BRCA1-230ENST00000634433 CFAP126Q5VTH2 177 aa5.18□□□□□ -1.58
BRCA1-230ENST00000634433 C1orf158Q8N1D5 194 aa5.18□□□□□ -1.58
BRCA1-230ENST00000634433 SPATA25Q9BR10 227 aa5.18□□□□□ -1.58
BRCA1-230ENST00000634433 HHLA3Q9XRX5 114 aa5.18□□□□□ -1.58
BRCA1-230ENST00000634433 WNK1Q9H4A3 2382 aa5.18□□□□□ -1.58
BRCA1-230ENST00000634433 FAM240AA0A1B0GVK7 77 aa5.18□□□□□ -1.58
BRCA1-230ENST00000634433 NMUP48645 174 aa5.18□□□□□ -1.58
BRCA1-230ENST00000634433 ZC2HC1BQ5TFG8 222 aa5.18□□□□□ -1.58
BRCA1-230ENST00000634433 UFSP1Q6NVU6 142 aa5.18□□□□□ -1.58
BRCA1-230ENST00000634433 NEGR1Q7Z3B1 354 aa5.18□□□□□ -1.58
BRCA1-230ENST00000634433 LINC00482Q8N8I6 264 aa5.18□□□□□ -1.58
BRCA1-230ENST00000634433 FGF6P10767 208 aa5.17□□□□□ -1.58
BRCA1-230ENST00000634433 PMVKQ15126 192 aa5.17□□□□□ -1.58
BRCA1-230ENST00000634433 TMEM263Q8WUH6 116 aaKnown RBP5.17□□□□□ -1.58
BRCA1-230ENST00000634433 IGHV3OR16-12A0A075B7B8 117 aa5.17□□□□□ -1.58
BRCA1-230ENST00000634433 IGIPA6NJ69 53 aa5.17□□□□□ -1.58
BRCA1-230ENST00000634433 IGHV3-53P01767 116 aa5.17□□□□□ -1.58
BRCA1-230ENST00000634433 TCTAP57738 103 aa5.17□□□□□ -1.58
BRCA1-230ENST00000634433 KRTAP10-3P60369 221 aa5.17□□□□□ -1.58
BRCA1-230ENST00000634433 C9orf66Q5T8R8 295 aa5.17□□□□□ -1.58
BRCA1-230ENST00000634433 C19orf73Q9NVV2 129 aa5.17□□□□□ -1.58
BRCA1-230ENST00000634433 COL6A5A8TX70 2615 aa5.17□□□□□ -1.58
BRCA1-230ENST00000634433 LOC107984640A0A0U1RRK4 108 aa5.16□□□□□ -1.58
BRCA1-230ENST00000634433 TSHBP01222 138 aa5.16□□□□□ -1.58
BRCA1-230ENST00000634433 MPV17L2Q567V2 206 aa5.16□□□□□ -1.58
BRCA1-230ENST00000634433 GTSCR1Q86UQ5 136 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms