RNA–Protein interactions for RNA: ENST00000623342.1

SND1-IT1-201, SND1 intronic transcript 1, humanhuman

BASIC

Gene SND1-IT1, Length 2,481 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1-201ENST00000623342 CFAP126Q5VTH2 177 aa6.06□□□□□ -1.44
SND1-IT1-201ENST00000623342 C11orf44Q8N8P7 122 aa6.06□□□□□ -1.44
SND1-IT1-201ENST00000623342 C11orf72Q8NBR9 251 aa6.06□□□□□ -1.44
SND1-IT1-201ENST00000623342 ZNF479Q96JC4 524 aa6.06□□□□□ -1.44
SND1-IT1-201ENST00000623342 VCX2Q9H322 139 aa6.06□□□□□ -1.44
SND1-IT1-201ENST00000623342 IGLV4-3A0A075B6K6 122 aa6.05□□□□□ -1.44
SND1-IT1-201ENST00000623342 TMEM238LA0A1B0GVL6 79 aa6.05□□□□□ -1.44
SND1-IT1-201ENST00000623342 A0A1W2PRX2 142 aa6.05□□□□□ -1.44
SND1-IT1-201ENST00000623342 A6NJY4 79 aa6.05□□□□□ -1.44
SND1-IT1-201ENST00000623342 K7ERU9 68 aa6.05□□□□□ -1.44
SND1-IT1-201ENST00000623342 RHODO00212 210 aa6.05□□□□□ -1.44
SND1-IT1-201ENST00000623342 CD28P10747 220 aa6.05□□□□□ -1.44
SND1-IT1-201ENST00000623342 RNF151Q2KHN1 245 aa6.05□□□□□ -1.44
SND1-IT1-201ENST00000623342 ODF3L2Q3SX64 289 aa6.05□□□□□ -1.44
SND1-IT1-201ENST00000623342 PYGO1Q9Y3Y4 419 aa6.05□□□□□ -1.44
SND1-IT1-201ENST00000623342 A0A0J9YY99 117 aa6.05□□□□□ -1.44
SND1-IT1-201ENST00000623342 TSPEAR-AS2P59090 65 aa6.05□□□□□ -1.44
SND1-IT1-201ENST00000623342 RRN3P1Q2M238 152 aa6.05□□□□□ -1.44
SND1-IT1-201ENST00000623342 BEAN1Q3B7T3 259 aa6.05□□□□□ -1.44
SND1-IT1-201ENST00000623342 Q6ZSN1 163 aa6.05□□□□□ -1.44
SND1-IT1-201ENST00000623342 TMEM223A0PJW6 202 aa6.04□□□□□ -1.44
SND1-IT1-201ENST00000623342 J3QQQ9 107 aa6.04□□□□□ -1.44
SND1-IT1-201ENST00000623342 LGALS3P17931 250 aaKnown RBP6.04□□□□□ -1.44
SND1-IT1-201ENST00000623342 STHQ8IWL8 128 aa6.04□□□□□ -1.44
SND1-IT1-201ENST00000623342 MRPL16Q9NX20 251 aaKnown RBP6.04□□□□□ -1.44
SND1-IT1-201ENST00000623342 HIVEP2P31629 2446 aa6.04□□□□□ -1.44
SND1-IT1-201ENST00000623342 LEPROTO15243 131 aa6.04□□□□□ -1.44
SND1-IT1-201ENST00000623342 CRYBA4P53673 196 aa6.04□□□□□ -1.44
SND1-IT1-201ENST00000623342 DNAJC30Q96LL9 226 aa6.04□□□□□ -1.44
SND1-IT1-201ENST00000623342 SMR3AQ99954 134 aa6.04□□□□□ -1.44
SND1-IT1-201ENST00000623342 SPANXB1Q9NS25 103 aaPredicted RBP6.04□□□□□ -1.44
SND1-IT1-201ENST00000623342 XCL2Q9UBD3 114 aa6.04□□□□□ -1.44
SND1-IT1-201ENST00000623342 A0A0J9YXV3 536 aa6.03□□□□□ -1.44
SND1-IT1-201ENST00000623342 RS1O15537 224 aa6.03□□□□□ -1.44
SND1-IT1-201ENST00000623342 IGHV3-53P01767 116 aa6.03□□□□□ -1.44
SND1-IT1-201ENST00000623342 ZNF22P17026 224 aaPredicted RBP6.03□□□□□ -1.44
SND1-IT1-201ENST00000623342 KRTAP1-1Q07627 177 aa6.03□□□□□ -1.44
SND1-IT1-201ENST00000623342 SLC25A29Q8N8R3 303 aa6.03□□□□□ -1.44
SND1-IT1-201ENST00000623342 AMELXQ99217 191 aa6.03□□□□□ -1.44
SND1-IT1-201ENST00000623342 CITED2Q99967 270 aaPredicted RBP6.03□□□□□ -1.44
SND1-IT1-201ENST00000623342 YAE1D1Q9NRH1 226 aa6.03□□□□□ -1.44
SND1-IT1-201ENST00000623342 TSSC4Q9Y5U2 329 aaPredicted RBP6.03□□□□□ -1.44
SND1-IT1-201ENST00000623342 ATRQ13535 2644 aa6.03□□□□□ -1.44
SND1-IT1-201ENST00000623342 J3QKU1 62 aa6.03□□□□□ -1.44
SND1-IT1-201ENST00000623342 UBE2D1P51668 147 aa6.03□□□□□ -1.44
SND1-IT1-201ENST00000623342 C16orf95Q9H693 158 aa6.03□□□□□ -1.44
SND1-IT1-201ENST00000623342 Q9UF83 564 aa6.03□□□□□ -1.44
SND1-IT1-201ENST00000623342 NACAE9PAV3 2078 aa6.02□□□□□ -1.45
SND1-IT1-201ENST00000623342 SAP30O75446 220 aa6.02□□□□□ -1.45
SND1-IT1-201ENST00000623342 RNASE1P07998 156 aaKnown RBP6.02□□□□□ -1.45
SND1-IT1-201ENST00000623342 AZU1P20160 251 aa6.02□□□□□ -1.45
SND1-IT1-201ENST00000623342 C1orf158Q8N1D5 194 aa6.02□□□□□ -1.45
SND1-IT1-201ENST00000623342 LINC01006Q8NI28 216 aa6.02□□□□□ -1.45
SND1-IT1-201ENST00000623342 FAM104AQ969W3 186 aa6.02□□□□□ -1.45
SND1-IT1-201ENST00000623342 VPS25Q9BRG1 176 aa6.02□□□□□ -1.45
SND1-IT1-201ENST00000623342 CHCHD7Q9BUK0 85 aa6.02□□□□□ -1.45
SND1-IT1-201ENST00000623342 C2CD3Q4AC94 2353 aa6.02□□□□□ -1.45
SND1-IT1-201ENST00000623342 IGHV3-30P01768 117 aa6.02□□□□□ -1.45
SND1-IT1-201ENST00000623342 IGHV3-30-5P0DP03 117 aa6.02□□□□□ -1.45
SND1-IT1-201ENST00000623342 SPANXA1Q9NS26 97 aa6.02□□□□□ -1.45
SND1-IT1-201ENST00000623342 PGPEP1Q9NXJ5 209 aa6.02□□□□□ -1.45
SND1-IT1-201ENST00000623342 NBEAL2Q6ZNJ1 2754 aa6.01□□□□□ -1.45
SND1-IT1-201ENST00000623342 IGHV3OR16-12A0A075B7B8 117 aa6.01□□□□□ -1.45
SND1-IT1-201ENST00000623342 MRPS36P82909 103 aaKnown RBP6.01□□□□□ -1.45
SND1-IT1-201ENST00000623342 CEMP1Q6PRD7 247 aaPredicted RBP6.01□□□□□ -1.45
SND1-IT1-201ENST00000623342 IL17DQ8TAD2 202 aa6.01□□□□□ -1.45
SND1-IT1-201ENST00000623342 UBE2D4Q9Y2X8 147 aa6.01□□□□□ -1.45
SND1-IT1-201ENST00000623342 IGHV3-64A0A075B6Q5 118 aa6.01□□□□□ -1.45
SND1-IT1-201ENST00000623342 F8W1H4 67 aa6.01□□□□□ -1.45
SND1-IT1-201ENST00000623342 CMC4P56277 68 aaPredicted RBP6.01□□□□□ -1.45
SND1-IT1-201ENST00000623342 COTL1Q14019 142 aa6.01□□□□□ -1.45
SND1-IT1-201ENST00000623342 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6□□□□□ -1.45
SND1-IT1-201ENST00000623342 IGHV3-38A0A0C4DH36 116 aa6□□□□□ -1.45
SND1-IT1-201ENST00000623342 IGKV2-29A2NJV5 120 aaPredicted RBP6□□□□□ -1.45
SND1-IT1-201ENST00000623342 G3V4G9 280 aa6□□□□□ -1.45
SND1-IT1-201ENST00000623342 H3BMG7 143 aa6□□□□□ -1.45
SND1-IT1-201ENST00000623342 PKD1L1Q8TDX9 2849 aa6□□□□□ -1.45
SND1-IT1-201ENST00000623342 TRGV1A0A0A0MS02 117 aa6□□□□□ -1.45
SND1-IT1-201ENST00000623342 APOMO95445 188 aa6□□□□□ -1.45
SND1-IT1-201ENST00000623342 NDUFA11Q86Y39 141 aa6□□□□□ -1.45
SND1-IT1-201ENST00000623342 TINCRA0A1B0GVN0 87 aa5.99□□□□□ -1.45
SND1-IT1-201ENST00000623342 TSPAN13O95857 204 aa5.99□□□□□ -1.45
SND1-IT1-201ENST00000623342 PCP4P48539 62 aa5.99□□□□□ -1.45
SND1-IT1-201ENST00000623342 RNASE13Q5GAN3 156 aaKnown RBP5.99□□□□□ -1.45
SND1-IT1-201ENST00000623342 TMEM263Q8WUH6 116 aaKnown RBP5.99□□□□□ -1.45
SND1-IT1-201ENST00000623342 TIMM21Q9BVV7 248 aa5.99□□□□□ -1.45
SND1-IT1-201ENST00000623342 IGHV3-30-3P0DP02 117 aa5.99□□□□□ -1.45
SND1-IT1-201ENST00000623342 RPL24P83731 157 aaKnown RBP5.99□□□□□ -1.45
SND1-IT1-201ENST00000623342 KRTAP3-3Q9BYR6 98 aa5.99□□□□□ -1.45
SND1-IT1-201ENST00000623342 KRTAP3-2Q9BYR7 98 aa5.99□□□□□ -1.45
SND1-IT1-201ENST00000623342 TMEM238C9JI98 176 aa5.98□□□□□ -1.45
SND1-IT1-201ENST00000623342 CFC1BP0CG36 223 aa5.98□□□□□ -1.45
SND1-IT1-201ENST00000623342 CFC1P0CG37 223 aa5.98□□□□□ -1.45
SND1-IT1-201ENST00000623342 GAGE13Q4V321 117 aa5.98□□□□□ -1.45
SND1-IT1-201ENST00000623342 Q6ZUT4 128 aa5.98□□□□□ -1.45
SND1-IT1-201ENST00000623342 C10orf126Q8N4M7 172 aa5.98□□□□□ -1.45
SND1-IT1-201ENST00000623342 ZNF418Q8TF45 676 aaPredicted RBP5.98□□□□□ -1.45
SND1-IT1-201ENST00000623342 IGHV1-58A0A0C4DH39 117 aa5.98□□□□□ -1.45
SND1-IT1-201ENST00000623342 IGLV1-51P01701 117 aa5.98□□□□□ -1.45
SND1-IT1-201ENST00000623342 WFDC2Q14508 124 aa5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms