RNA–Protein interactions for RNA: ENST00000619300.4

PSPC1-206, Transcript of paraspeckle component 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PSPC1, Length 2,013 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-206ENST00000619300 TEP1Q99973 2627 aaKnown RBP13.65□□□□□ -0.22
PSPC1-206ENST00000619300 SIVA1O15304 175 aa13.64□□□□□ -0.23
PSPC1-206ENST00000619300 C12orf54Q6X4T0 127 aa13.64□□□□□ -0.23
PSPC1-206ENST00000619300 COX11Q9Y6N1 276 aa13.63□□□□□ -0.23
PSPC1-206ENST00000619300 PAPPA-AS1Q5QFB9 102 aa13.62□□□□□ -0.23
PSPC1-206ENST00000619300 OPRPNQ99935 248 aaPredicted RBP13.62□□□□□ -0.23
PSPC1-206ENST00000619300 IGLV4-69A0A075B6H9 119 aa13.61□□□□□ -0.23
PSPC1-206ENST00000619300 GAGE12BA1L429 117 aa13.61□□□□□ -0.23
PSPC1-206ENST00000619300 GAGE7O76087 117 aa13.61□□□□□ -0.23
PSPC1-206ENST00000619300 GAGE12FP0CL80 117 aa13.61□□□□□ -0.23
PSPC1-206ENST00000619300 GAGE12GP0CL81 117 aa13.61□□□□□ -0.23
PSPC1-206ENST00000619300 GAGE12IP0CL82 117 aa13.61□□□□□ -0.23
PSPC1-206ENST00000619300 TRGV2A0A075B6R0 118 aa13.61□□□□□ -0.23
PSPC1-206ENST00000619300 TRBV10-1A0A0K0K1A3 114 aa13.61□□□□□ -0.23
PSPC1-206ENST00000619300 BVES-AS1Q5T3Y7 98 aa13.61□□□□□ -0.23
PSPC1-206ENST00000619300 ZNRF2Q8NHG8 242 aa13.61□□□□□ -0.23
PSPC1-206ENST00000619300 PYGO1Q9Y3Y4 419 aa13.61□□□□□ -0.23
PSPC1-206ENST00000619300 TRBV7-3A0A075B6L6 115 aa13.6□□□□□ -0.23
PSPC1-206ENST00000619300 K7EQD1 137 aa13.6□□□□□ -0.23
PSPC1-206ENST00000619300 PHLDA1Q8WV24 401 aaPredicted RBP13.6□□□□□ -0.23
PSPC1-206ENST00000619300 CHCHD7Q9BUK0 85 aa13.6□□□□□ -0.23
PSPC1-206ENST00000619300 TTTY13Q9BZ97 58 aa13.6□□□□□ -0.23
PSPC1-206ENST00000619300 IGHV3-38A0A0C4DH36 116 aa13.59□□□□□ -0.23
PSPC1-206ENST00000619300 CIDEAO60543 219 aa13.59□□□□□ -0.23
PSPC1-206ENST00000619300 UBE2V1Q13404 147 aa13.59□□□□□ -0.23
PSPC1-206ENST00000619300 COTL1Q14019 142 aa13.59□□□□□ -0.23
PSPC1-206ENST00000619300 TMEM97Q5BJF2 176 aa13.59□□□□□ -0.23
PSPC1-206ENST00000619300 IGLV4-3A0A075B6K6 122 aa13.59□□□□□ -0.23
PSPC1-206ENST00000619300 C11orf86A6NJI1 115 aa13.59□□□□□ -0.23
PSPC1-206ENST00000619300 SLC25A29Q8N8R3 303 aa13.59□□□□□ -0.23
PSPC1-206ENST00000619300 EMP1P54849 157 aa13.58□□□□□ -0.24
PSPC1-206ENST00000619300 RPL36AP83881 106 aaKnown RBP13.58□□□□□ -0.24
PSPC1-206ENST00000619300 RPL36ALQ969Q0 106 aaKnown RBP13.58□□□□□ -0.24
PSPC1-206ENST00000619300 VCX2Q9H322 139 aa13.58□□□□□ -0.24
PSPC1-206ENST00000619300 TRAV8-6A0A0B4J262 113 aa13.57□□□□□ -0.24
PSPC1-206ENST00000619300 WIPF1O43516 503 aa13.57□□□□□ -0.24
PSPC1-206ENST00000619300 K7EP13 123 aa13.57□□□□□ -0.24
PSPC1-206ENST00000619300 PTTG1IPP53801 180 aa13.57□□□□□ -0.24
PSPC1-206ENST00000619300 MAPKAPK5-AS1Q8N8E1 139 aa13.57□□□□□ -0.24
PSPC1-206ENST00000619300 E9PLD3 99 aa13.56□□□□□ -0.24
PSPC1-206ENST00000619300 KRTAP24-1Q3LI83 254 aa13.56□□□□□ -0.24
PSPC1-206ENST00000619300 SMIM9A6NGZ8 99 aa13.56□□□□□ -0.24
PSPC1-206ENST00000619300 CCL25O15444 150 aa13.56□□□□□ -0.24
PSPC1-206ENST00000619300 KIR2DL5BQ8NHK3 375 aa13.56□□□□□ -0.24
PSPC1-206ENST00000619300 FAM104AQ969W3 186 aa13.56□□□□□ -0.24
PSPC1-206ENST00000619300 HIGD1BQ9P298 99 aa13.56□□□□□ -0.24
PSPC1-206ENST00000619300 X6R8D5 127 aa13.56□□□□□ -0.24
PSPC1-206ENST00000619300 CRYBA4P53673 196 aa13.55□□□□□ -0.24
PSPC1-206ENST00000619300 OR11H2Q8NH07 326 aa13.55□□□□□ -0.24
PSPC1-206ENST00000619300 TRBV25-1A0A075B6N4 114 aa13.54□□□□□ -0.24
PSPC1-206ENST00000619300 HSD52Q0P140 79 aa13.54□□□□□ -0.24
PSPC1-206ENST00000619300 DAZ4Q86SG3 579 aaKnown RBP13.54□□□□□ -0.24
PSPC1-206ENST00000619300 NFE4Q86UQ8 179 aa13.54□□□□□ -0.24
PSPC1-206ENST00000619300 DAZ3Q9NR90 486 aaKnown RBP13.54□□□□□ -0.24
PSPC1-206ENST00000619300 SPANXA1Q9NS26 97 aa13.54□□□□□ -0.24
PSPC1-206ENST00000619300 UBE2D4Q9Y2X8 147 aa13.54□□□□□ -0.24
PSPC1-206ENST00000619300 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.54□□□□□ -0.24
PSPC1-206ENST00000619300 TRBV6-4A0A1B0GX49 114 aa13.54□□□□□ -0.24
PSPC1-206ENST00000619300 IGKV2-29A2NJV5 120 aaPredicted RBP13.54□□□□□ -0.24
PSPC1-206ENST00000619300 UBE2D3P61077 147 aa13.54□□□□□ -0.24
PSPC1-206ENST00000619300 UBE2D2P62837 147 aa13.54□□□□□ -0.24
PSPC1-206ENST00000619300 CEMP1Q6PRD7 247 aaPredicted RBP13.54□□□□□ -0.24
PSPC1-206ENST00000619300 AMELXQ99217 191 aa13.54□□□□□ -0.24
PSPC1-206ENST00000619300 PRADC1Q9BSG0 188 aa13.54□□□□□ -0.24
PSPC1-206ENST00000619300 GAGE12JA6NER3 117 aa13.53□□□□□ -0.24
PSPC1-206ENST00000619300 APOC4P55056 127 aa13.53□□□□□ -0.24
PSPC1-206ENST00000619300 GAGE4Q13068 117 aa13.53□□□□□ -0.24
PSPC1-206ENST00000619300 GAGE5Q13069 117 aa13.53□□□□□ -0.24
PSPC1-206ENST00000619300 GAGE13Q4V321 117 aa13.53□□□□□ -0.24
PSPC1-206ENST00000619300 TRGV4A0A0C4DH28 118 aa13.52□□□□□ -0.24
PSPC1-206ENST00000619300 HERVK_113P61574 105 aa13.52□□□□□ -0.24
PSPC1-206ENST00000619300 TMEM170BQ5T4T1 132 aa13.52□□□□□ -0.24
PSPC1-206ENST00000619300 FHL2Q14192 279 aa13.51□□□□□ -0.25
PSPC1-206ENST00000619300 LINC00612Q8N6U2 182 aa13.51□□□□□ -0.25
PSPC1-206ENST00000619300 MYMXA0A1B0GTQ4 84 aa13.51□□□□□ -0.25
PSPC1-206ENST00000619300 CHAC1Q9BUX1 264 aa13.51□□□□□ -0.25
PSPC1-206ENST00000619300 DEFB130BP0DP73 79 aa13.5□□□□□ -0.25
PSPC1-206ENST00000619300 DEFB130AP0DP74 79 aa13.5□□□□□ -0.25
PSPC1-206ENST00000619300 SEC11AP67812 179 aa13.5□□□□□ -0.25
PSPC1-206ENST00000619300 A0A0J9YXV3 536 aa13.49□□□□□ -0.25
PSPC1-206ENST00000619300 NTM-AS1Q6ZSK4 140 aa13.49□□□□□ -0.25
PSPC1-206ENST00000619300 DEFB135Q30KP9 77 aa13.49□□□□□ -0.25
PSPC1-206ENST00000619300 TIMM21Q9BVV7 248 aa13.49□□□□□ -0.25
PSPC1-206ENST00000619300 TRRAPQ9Y4A5 3859 aa13.48□□□□□ -0.25
PSPC1-206ENST00000619300 C3orf56Q8N813 242 aa13.48□□□□□ -0.25
PSPC1-206ENST00000619300 LOC100131303A0A0U1RQF7 123 aa13.47□□□□□ -0.25
PSPC1-206ENST00000619300 CYSRT1A8MQ03 144 aa13.47□□□□□ -0.25
PSPC1-206ENST00000619300 RNASE13Q5GAN3 156 aaKnown RBP13.47□□□□□ -0.25
PSPC1-206ENST00000619300 MRPS36P82909 103 aaKnown RBP13.47□□□□□ -0.25
PSPC1-206ENST00000619300 GTSF1LQ9H1H1 148 aa13.47□□□□□ -0.25
PSPC1-206ENST00000619300 TAX1BP3O14907 124 aa13.46□□□□□ -0.25
PSPC1-206ENST00000619300 ZNF22P17026 224 aaPredicted RBP13.46□□□□□ -0.25
PSPC1-206ENST00000619300 RBX1P62877 108 aa13.46□□□□□ -0.25
PSPC1-206ENST00000619300 DGAT2L7PQ6IED9 249 aa13.46□□□□□ -0.25
PSPC1-206ENST00000619300 Q6ZUT4 128 aa13.46□□□□□ -0.25
PSPC1-206ENST00000619300 Q6ZVH6 145 aa13.46□□□□□ -0.25
PSPC1-206ENST00000619300 TMEM223A0PJW6 202 aa13.46□□□□□ -0.26
PSPC1-206ENST00000619300 IGHV4-30-4P0DP06 118 aa13.46□□□□□ -0.26
PSPC1-206ENST00000619300 ZNF815PA8K554 130 aa13.45□□□□□ -0.26
PSPC1-206ENST00000619300 SHISA2Q6UWI4 295 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms