RNA–Protein interactions for RNA: ENST00000616179.4

SYNRG-223, Transcript of synergin gamma, human

APPRIS ALT2 TSL 5 BASIC

Gene SYNRG, Length 4,050 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SYNRG-223	ENST00000616179	DNAJC30	Q96LL9	226 aa		11.67	□□□□□ -0.54
SYNRG-223	ENST00000616179	ZNF575	Q86XF7	245 aa		11.67	□□□□□ -0.54
SYNRG-223	ENST00000616179	SMIM9	A6NGZ8	99 aa		11.66	□□□□□ -0.54
SYNRG-223	ENST00000616179	ZFP36	P26651	326 aa	Known RBP	11.66	□□□□□ -0.54
SYNRG-223	ENST00000616179	C14orf132	Q9NPU4	83 aa		11.66	□□□□□ -0.54
SYNRG-223	ENST00000616179	MOB4	Q9Y3A3	225 aa		11.66	□□□□□ -0.54
SYNRG-223	ENST00000616179	UBE2L6	O14933	153 aa		11.66	□□□□□ -0.54
SYNRG-223	ENST00000616179	PAX4	O43316	350 aa		11.66	□□□□□ -0.54
SYNRG-223	ENST00000616179	POM121L12	Q8N7R1	296 aa		11.65	□□□□□ -0.54
SYNRG-223	ENST00000616179	MAP1A	P78559	2803 aa	Predicted RBP	11.65	□□□□□ -0.54
SYNRG-223	ENST00000616179	TMEM61	Q8N0U2	210 aa		11.65	□□□□□ -0.54
SYNRG-223	ENST00000616179	DSCR8	Q96T75	97 aa		11.65	□□□□□ -0.54
SYNRG-223	ENST00000616179	CDKN2A-AS1	Q9UH64	79 aa		11.65	□□□□□ -0.54
SYNRG-223	ENST00000616179	IGHV1-69	P01742	117 aa		11.65	□□□□□ -0.54
SYNRG-223	ENST00000616179		H3BUX3	64 aa		11.65	□□□□□ -0.55
SYNRG-223	ENST00000616179	ATOX1	O00244	68 aa		11.65	□□□□□ -0.55
SYNRG-223	ENST00000616179	NDUFA4	O00483	81 aa		11.65	□□□□□ -0.55
SYNRG-223	ENST00000616179	TRBV27	A0A0K0K1C4	114 aa		11.64	□□□□□ -0.55
SYNRG-223	ENST00000616179	PFN2	P35080	140 aa		11.64	□□□□□ -0.55
SYNRG-223	ENST00000616179		M0QY20	66 aa		11.64	□□□□□ -0.55
SYNRG-223	ENST00000616179	PRM2	P04554	102 aa		11.64	□□□□□ -0.55
SYNRG-223	ENST00000616179	RNF152	Q8N8N0	203 aa		11.64	□□□□□ -0.55
SYNRG-223	ENST00000616179	FAM223B	A6NKX1	122 aa		11.63	□□□□□ -0.55
SYNRG-223	ENST00000616179	FAM223A	Q8IWN6	122 aa		11.63	□□□□□ -0.55
SYNRG-223	ENST00000616179	ATM	Q13315	3056 aa		11.63	□□□□□ -0.55
SYNRG-223	ENST00000616179	BRI3	O95415	125 aa		11.63	□□□□□ -0.55
SYNRG-223	ENST00000616179	ATP5G1	P05496	136 aa		11.63	□□□□□ -0.55
SYNRG-223	ENST00000616179	ITLN2	Q8WWU7	325 aa	Predicted RBP	11.62	□□□□□ -0.55
SYNRG-223	ENST00000616179	BPESC1	Q9GZL8	116 aa		11.62	□□□□□ -0.55
SYNRG-223	ENST00000616179	IGHV4OR15-8	A0A075B7B6	117 aa		11.62	□□□□□ -0.55
SYNRG-223	ENST00000616179		A0A087WW49	117 aa		11.62	□□□□□ -0.55
SYNRG-223	ENST00000616179		A0A087WVE0	104 aa		11.62	□□□□□ -0.55
SYNRG-223	ENST00000616179	TIRAP	P58753	221 aa		11.61	□□□□□ -0.55
SYNRG-223	ENST00000616179	PIK3CD-AS1	Q5SR53	167 aa		11.61	□□□□□ -0.55
SYNRG-223	ENST00000616179	HRCT1	Q6UXD1	115 aa		11.61	□□□□□ -0.55
SYNRG-223	ENST00000616179	VSIG2	Q96IQ7	327 aa		11.61	□□□□□ -0.55
SYNRG-223	ENST00000616179	COX7C	P15954	63 aa		11.61	□□□□□ -0.55
SYNRG-223	ENST00000616179	NRGN	Q92686	78 aa		11.61	□□□□□ -0.55
SYNRG-223	ENST00000616179	COX7A2L	O14548	114 aa		11.6	□□□□□ -0.55
SYNRG-223	ENST00000616179	EIF4EBP3	O60516	100 aa	Predicted RBP	11.6	□□□□□ -0.55
SYNRG-223	ENST00000616179	BLCAP	P62952	87 aa		11.6	□□□□□ -0.55
SYNRG-223	ENST00000616179	MED14OS	P0DP75	135 aa		11.6	□□□□□ -0.55
SYNRG-223	ENST00000616179	IGF2R	P11717	2491 aa		11.6	□□□□□ -0.55
SYNRG-223	ENST00000616179	ODF3B	A8MYP8	253 aa		11.6	□□□□□ -0.55
SYNRG-223	ENST00000616179	EDN2	P20800	178 aa		11.6	□□□□□ -0.55
SYNRG-223	ENST00000616179	SOCS3	O14543	225 aa		11.59	□□□□□ -0.55
SYNRG-223	ENST00000616179	PRB1	P04280	392 aa		11.59	□□□□□ -0.55
SYNRG-223	ENST00000616179	C10orf105	Q8TEF2	133 aa		11.59	□□□□□ -0.55
SYNRG-223	ENST00000616179	C1orf43	Q9BWL3	253 aa		11.59	□□□□□ -0.55
SYNRG-223	ENST00000616179	IGFL3	Q6UXB1	125 aa		11.58	□□□□□ -0.56
SYNRG-223	ENST00000616179	LINC00308	Q8TCZ7	52 aa		11.58	□□□□□ -0.56
SYNRG-223	ENST00000616179	DEFB131A	P59861	70 aa		11.58	□□□□□ -0.56
SYNRG-223	ENST00000616179	LINC00526	Q96FQ7	95 aa		11.58	□□□□□ -0.56
SYNRG-223	ENST00000616179	ZZEF1	O43149	2961 aa		11.58	□□□□□ -0.56
SYNRG-223	ENST00000616179	FAM240A	A0A1B0GVK7	77 aa		11.57	□□□□□ -0.56
SYNRG-223	ENST00000616179	TRAV23DV6	A0A075B6W5	121 aa		11.57	□□□□□ -0.56
SYNRG-223	ENST00000616179	SLPI	P03973	132 aa		11.57	□□□□□ -0.56
SYNRG-223	ENST00000616179	RPL36A	P83881	106 aa	Known RBP	11.57	□□□□□ -0.56
SYNRG-223	ENST00000616179	RPL36AL	Q969Q0	106 aa	Known RBP	11.57	□□□□□ -0.56
SYNRG-223	ENST00000616179	UBE2E2	Q96LR5	201 aa		11.57	□□□□□ -0.56
SYNRG-223	ENST00000616179	AMELX	Q99217	191 aa		11.57	□□□□□ -0.56
SYNRG-223	ENST00000616179	IMUP	Q9GZP8	106 aa		11.56	□□□□□ -0.56
SYNRG-223	ENST00000616179	USP9Y	O00507	2555 aa	Predicted RBP	11.56	□□□□□ -0.56
SYNRG-223	ENST00000616179	TRGV1	A0A0A0MS02	117 aa		11.56	□□□□□ -0.56
SYNRG-223	ENST00000616179	LECT2	O14960	151 aa		11.56	□□□□□ -0.56
SYNRG-223	ENST00000616179	C5orf56	Q8N8D9	126 aa		11.56	□□□□□ -0.56
SYNRG-223	ENST00000616179	USMG5	Q96IX5	58 aa		11.56	□□□□□ -0.56
SYNRG-223	ENST00000616179	CUL9	Q8IWT3	2517 aa		11.56	□□□□□ -0.56
SYNRG-223	ENST00000616179	MAL	P21145	153 aa		11.56	□□□□□ -0.56
SYNRG-223	ENST00000616179	PLA2G2C	Q5R387	149 aa		11.56	□□□□□ -0.56
SYNRG-223	ENST00000616179	DYNLRB2	Q8TF09	96 aa		11.56	□□□□□ -0.56
SYNRG-223	ENST00000616179	DMD	P11532	3685 aa		11.56	□□□□□ -0.56
SYNRG-223	ENST00000616179	RNF223	E7ERA6	249 aa		11.55	□□□□□ -0.56
SYNRG-223	ENST00000616179	KIR2DL5B	Q8NHK3	375 aa		11.55	□□□□□ -0.56
SYNRG-223	ENST00000616179	LINC00467	Q9BRT7	94 aa		11.55	□□□□□ -0.56
SYNRG-223	ENST00000616179	TRBV7-7	A0A0K0K1E9	115 aa		11.55	□□□□□ -0.56
SYNRG-223	ENST00000616179	RBMY1B	A6NDE4	496 aa	Known RBP	11.55	□□□□□ -0.56
SYNRG-223	ENST00000616179	RBMY1E	A6NEQ0	496 aa	Known RBP	11.55	□□□□□ -0.56
SYNRG-223	ENST00000616179	RBMY1D	P0C7P1	496 aa	Known RBP	11.55	□□□□□ -0.56
SYNRG-223	ENST00000616179	RBMY1A1	P0DJD3	496 aa	Known RBP	11.55	□□□□□ -0.56
SYNRG-223	ENST00000616179	RBMY1C	P0DJD4	496 aa		11.55	□□□□□ -0.56
SYNRG-223	ENST00000616179	LINC00315	P59091	139 aa		11.55	□□□□□ -0.56
SYNRG-223	ENST00000616179	WFDC9	Q8NEX5	89 aa		11.55	□□□□□ -0.56
SYNRG-223	ENST00000616179	MUC4	Q99102	2169 aa		11.54	□□□□□ -0.56
SYNRG-223	ENST00000616179	TLN2	Q9Y4G6	2542 aa		11.54	□□□□□ -0.56
SYNRG-223	ENST00000616179	KIF25-AS1	Q9Y6Z4	181 aa		11.54	□□□□□ -0.56
SYNRG-223	ENST00000616179		Q8N6K4	173 aa		11.54	□□□□□ -0.56
SYNRG-223	ENST00000616179	LRRC75A-AS1	Q8N1F1	130 aa		11.53	□□□□□ -0.56
SYNRG-223	ENST00000616179	C20orf197	Q8N268	126 aa		11.53	□□□□□ -0.56
SYNRG-223	ENST00000616179	TMEM243	Q9BU79	118 aa		11.53	□□□□□ -0.56
SYNRG-223	ENST00000616179	NCR3	O14931	201 aa		11.53	□□□□□ -0.56
SYNRG-223	ENST00000616179	SPANXD	Q9BXN6	97 aa		11.53	□□□□□ -0.56
SYNRG-223	ENST00000616179	SND1-IT1	Q9HBX3	110 aa		11.53	□□□□□ -0.56
SYNRG-223	ENST00000616179	SPANXC	Q9NY87	97 aa		11.53	□□□□□ -0.56
SYNRG-223	ENST00000616179	TRBV6-5	A0A0K0K1A5	114 aa		11.52	□□□□□ -0.56
SYNRG-223	ENST00000616179		F5H768	121 aa		11.52	□□□□□ -0.57
SYNRG-223	ENST00000616179	RBMY1F	Q15415	496 aa	Known RBP	11.52	□□□□□ -0.57
SYNRG-223	ENST00000616179	HAMP	P81172	84 aa		11.52	□□□□□ -0.57
SYNRG-223	ENST00000616179	SMCR5	Q8TEV8	140 aa		11.52	□□□□□ -0.57
SYNRG-223	ENST00000616179	XCL2	Q9UBD3	114 aa		11.52	□□□□□ -0.57

Retrieved 100 of 20,778 RNA–protein pairs in 162.9 ms