RNA–Protein interactions for RNA: ENST00000616033.4

MSH6-214, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 3,429 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-214ENST00000616033 MINOS1-NBL1R4GNA1 71 aa9.8□□□□□ -0.84
MSH6-214ENST00000616033 IGHV3-30-3P0DP02 117 aa9.79□□□□□ -0.84
MSH6-214ENST00000616033 LINC00315P59091 139 aa9.79□□□□□ -0.84
MSH6-214ENST00000616033 NRGNQ92686 78 aa9.79□□□□□ -0.84
MSH6-214ENST00000616033 CFAP46Q8IYW2 2715 aa9.79□□□□□ -0.84
MSH6-214ENST00000616033 M0R2P5 195 aa9.79□□□□□ -0.84
MSH6-214ENST00000616033 TMEM141Q96I45 108 aa9.79□□□□□ -0.84
MSH6-214ENST00000616033 AMELXQ99217 191 aa9.79□□□□□ -0.84
MSH6-214ENST00000616033 Q9UF83 564 aa9.79□□□□□ -0.84
MSH6-214ENST00000616033 GAGE2AQ6NT46 116 aa9.79□□□□□ -0.84
MSH6-214ENST00000616033 PKIGQ9Y2B9 76 aa9.78□□□□□ -0.84
MSH6-214ENST00000616033 TRAV13-1A0A0B4J241 112 aa9.78□□□□□ -0.84
MSH6-214ENST00000616033 TMEM223A0PJW6 202 aa9.78□□□□□ -0.84
MSH6-214ENST00000616033 LEPROTO15243 131 aa9.78□□□□□ -0.84
MSH6-214ENST00000616033 COX6CP09669 75 aa9.78□□□□□ -0.84
MSH6-214ENST00000616033 C5orf56Q8N8D9 126 aa9.78□□□□□ -0.84
MSH6-214ENST00000616033 RNF152Q8N8N0 203 aa9.78□□□□□ -0.84
MSH6-214ENST00000616033 NDUFA12Q9UI09 145 aa9.78□□□□□ -0.84
MSH6-214ENST00000616033 CELSR2Q9HCU4 2923 aa9.78□□□□□ -0.84
MSH6-214ENST00000616033 IGHV1-69DA0A0B4J2H0 117 aa9.78□□□□□ -0.84
MSH6-214ENST00000616033 F5H768 121 aa9.78□□□□□ -0.84
MSH6-214ENST00000616033 MRPL53Q96EL3 112 aaKnown RBP9.78□□□□□ -0.84
MSH6-214ENST00000616033 ICOSQ9Y6W8 199 aa9.78□□□□□ -0.84
MSH6-214ENST00000616033 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.77□□□□□ -0.85
MSH6-214ENST00000616033 IGKV2-29A2NJV5 120 aaPredicted RBP9.77□□□□□ -0.85
MSH6-214ENST00000616033 SIRPDQ9H106 197 aa9.77□□□□□ -0.85
MSH6-214ENST00000616033 IGHV3-16A0A0C4DH30 117 aa9.77□□□□□ -0.85
MSH6-214ENST00000616033 A0A1W2PPR1 153 aa9.77□□□□□ -0.85
MSH6-214ENST00000616033 RPL13AP40429 203 aaKnown RBP9.77□□□□□ -0.85
MSH6-214ENST00000616033 ADORA2A-AS1P86434 159 aa9.77□□□□□ -0.85
MSH6-214ENST00000616033 TIMM17AQ99595 171 aa9.77□□□□□ -0.85
MSH6-214ENST00000616033 KIF25-AS1Q9Y6Z4 181 aa9.77□□□□□ -0.85
MSH6-214ENST00000616033 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.76□□□□□ -0.85
MSH6-214ENST00000616033 H7C423 109 aa9.76□□□□□ -0.85
MSH6-214ENST00000616033 EBI3Q14213 229 aa9.76□□□□□ -0.85
MSH6-214ENST00000616033 ZANQ9Y493 2812 aa9.76□□□□□ -0.85
MSH6-214ENST00000616033 TRBV10-2A0A0K0K1G8 114 aa9.76□□□□□ -0.85
MSH6-214ENST00000616033 SBSPONQ8IVN8 264 aa9.76□□□□□ -0.85
MSH6-214ENST00000616033 LRRK2Q5S007 2527 aa9.76□□□□□ -0.85
MSH6-214ENST00000616033 NDUFA7O95182 113 aa9.76□□□□□ -0.85
MSH6-214ENST00000616033 U3KQE9 123 aa9.76□□□□□ -0.85
MSH6-214ENST00000616033 H3BUX3 64 aa9.75□□□□□ -0.85
MSH6-214ENST00000616033 IGLV4-3A0A075B6K6 122 aa9.75□□□□□ -0.85
MSH6-214ENST00000616033 C10orf99Q6UWK7 81 aa9.75□□□□□ -0.85
MSH6-214ENST00000616033 C1orf43Q9BWL3 253 aa9.75□□□□□ -0.85
MSH6-214ENST00000616033 SYNJ2BPP57105 145 aa9.75□□□□□ -0.85
MSH6-214ENST00000616033 CIRBPQ14011 172 aaKnown RBP9.75□□□□□ -0.85
MSH6-214ENST00000616033 TMEM101Q96IK0 257 aa9.75□□□□□ -0.85
MSH6-214ENST00000616033 TMEM126AQ9H061 195 aa9.75□□□□□ -0.85
MSH6-214ENST00000616033 LENEPQ9Y5L5 61 aa9.75□□□□□ -0.85
MSH6-214ENST00000616033 M0QY20 66 aa9.74□□□□□ -0.85
MSH6-214ENST00000616033 HIST2H2BDQ6DRA6 164 aa9.74□□□□□ -0.85
MSH6-214ENST00000616033 DNAJC30Q96LL9 226 aa9.74□□□□□ -0.85
MSH6-214ENST00000616033 J3KT08 172 aa9.74□□□□□ -0.85
MSH6-214ENST00000616033 C20orf203Q8NBC4 194 aa9.74□□□□□ -0.85
MSH6-214ENST00000616033 LGALS9O00182 355 aa9.73□□□□□ -0.85
MSH6-214ENST00000616033 MOB4Q9Y3A3 225 aa9.73□□□□□ -0.85
MSH6-214ENST00000616033 ABCA2Q9BZC7 2435 aa9.73□□□□□ -0.85
MSH6-214ENST00000616033 I3L3M4 83 aa9.73□□□□□ -0.85
MSH6-214ENST00000616033 OR13C6PQ8NH95 151 aa9.73□□□□□ -0.85
MSH6-214ENST00000616033 ZNF462Q96JM2 2506 aa9.73□□□□□ -0.85
MSH6-214ENST00000616033 TRAV25A0A0B4J276 109 aa9.73□□□□□ -0.85
MSH6-214ENST00000616033 GNLYP22749 145 aa9.73□□□□□ -0.85
MSH6-214ENST00000616033 FN1P02751 2386 aaKnown RBP9.72□□□□□ -0.85
MSH6-214ENST00000616033 IGHV4OR15-8A0A075B7B6 117 aa9.72□□□□□ -0.85
MSH6-214ENST00000616033 A0A087WW49 117 aa9.72□□□□□ -0.85
MSH6-214ENST00000616033 A0A0B4J2C4 111 aa9.72□□□□□ -0.85
MSH6-214ENST00000616033 TRBV27A0A0K0K1C4 114 aa9.72□□□□□ -0.85
MSH6-214ENST00000616033 NDUFA4O00483 81 aa9.72□□□□□ -0.85
MSH6-214ENST00000616033 DGAT2L7PQ6IED9 249 aa9.72□□□□□ -0.85
MSH6-214ENST00000616033 SOCS3O14543 225 aa9.72□□□□□ -0.85
MSH6-214ENST00000616033 PIMREGQ9BSJ6 248 aa9.72□□□□□ -0.85
MSH6-214ENST00000616033 HOXD3P31249 432 aaPredicted RBP9.72□□□□□ -0.85
MSH6-214ENST00000616033 UCNP55089 124 aa9.72□□□□□ -0.85
MSH6-214ENST00000616033 C10orf105Q8TEF2 133 aa9.72□□□□□ -0.85
MSH6-214ENST00000616033 DAZ1Q9NQZ3 744 aaKnown RBP9.72□□□□□ -0.85
MSH6-214ENST00000616033 IGSF10Q6WRI0 2623 aa9.72□□□□□ -0.85
MSH6-214ENST00000616033 IGKV3D-7A0A0C4DH55 119 aa9.71□□□□□ -0.85
MSH6-214ENST00000616033 IGHV4-38-2P0DP08 117 aa9.71□□□□□ -0.85
MSH6-214ENST00000616033 IGHV3OR16-12A0A075B7B8 117 aa9.71□□□□□ -0.86
MSH6-214ENST00000616033 CYSTM1Q9H1C7 97 aa9.71□□□□□ -0.86
MSH6-214ENST00000616033 RHOHQ15669 191 aa9.7□□□□□ -0.86
MSH6-214ENST00000616033 POM121L12Q8N7R1 296 aa9.7□□□□□ -0.86
MSH6-214ENST00000616033 IGKV3OR2-268A0A0C4DH90 116 aa9.7□□□□□ -0.86
MSH6-214ENST00000616033 ABCA12Q86UK0 2595 aa9.7□□□□□ -0.86
MSH6-214ENST00000616033 FAM223BA6NKX1 122 aa9.7□□□□□ -0.86
MSH6-214ENST00000616033 FAM223AQ8IWN6 122 aa9.7□□□□□ -0.86
MSH6-214ENST00000616033 C3orf22Q8N5N4 141 aa9.69□□□□□ -0.86
MSH6-214ENST00000616033 NXPH4O95158 308 aa9.69□□□□□ -0.86
MSH6-214ENST00000616033 IGHV1OR15-1A0A075B7D0 117 aa9.69□□□□□ -0.86
MSH6-214ENST00000616033 CCDC168Q8NDH2 2452 aa9.68□□□□□ -0.86
MSH6-214ENST00000616033 TRBV30A0A0K0K1B3 111 aa9.68□□□□□ -0.86
MSH6-214ENST00000616033 A0A0U1RQV1 116 aa9.68□□□□□ -0.86
MSH6-214ENST00000616033 C19orf84I3L1E1 186 aa9.68□□□□□ -0.86
MSH6-214ENST00000616033 CDKN2A-AS1Q9UH64 79 aa9.68□□□□□ -0.86
MSH6-214ENST00000616033 NAV2Q8IVL1 2488 aa9.68□□□□□ -0.86
MSH6-214ENST00000616033 KLLNB2CW77 178 aa9.68□□□□□ -0.86
MSH6-214ENST00000616033 SDIM1Q6ZPB5 146 aa9.68□□□□□ -0.86
MSH6-214ENST00000616033 PRB1P04280 392 aa9.67□□□□□ -0.86
MSH6-214ENST00000616033 Q9HAA7 133 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms