RNA–Protein interactions for RNA: ENST00000611963.4

TARDBP-213, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 739 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-213ENST00000611963 GAGE1Q13065 139 aa5.7□□□□□ -1.5
TARDBP-213ENST00000611963 GAGE4Q13068 117 aa5.7□□□□□ -1.5
TARDBP-213ENST00000611963 GAGE5Q13069 117 aa5.7□□□□□ -1.5
TARDBP-213ENST00000611963 LAGE3Q14657 143 aa5.7□□□□□ -1.5
TARDBP-213ENST00000611963 GAGE13Q4V321 117 aa5.7□□□□□ -1.5
TARDBP-213ENST00000611963 ZNRF2Q8NHG8 242 aa5.7□□□□□ -1.5
TARDBP-213ENST00000611963 PHLDA1Q8WV24 401 aaPredicted RBP5.7□□□□□ -1.5
TARDBP-213ENST00000611963 SPATA25Q9BR10 227 aa5.7□□□□□ -1.5
TARDBP-213ENST00000611963 TM2D3Q9BRN9 247 aa5.7□□□□□ -1.5
TARDBP-213ENST00000611963 KMT2CQ8NEZ4 4911 aaKnown RBP5.69□□□□□ -1.5
TARDBP-213ENST00000611963 TRBV10-1A0A0K0K1A3 114 aa5.69□□□□□ -1.5
TARDBP-213ENST00000611963 LEPROTL1O95214 131 aa5.69□□□□□ -1.5
TARDBP-213ENST00000611963 C3orf79P0CE67 100 aa5.69□□□□□ -1.5
TARDBP-213ENST00000611963 NHLRC4P0CG21 123 aaPredicted RBP5.69□□□□□ -1.5
TARDBP-213ENST00000611963 HTN3P15516 51 aa5.69□□□□□ -1.5
TARDBP-213ENST00000611963 FCER1GP30273 86 aa5.69□□□□□ -1.5
TARDBP-213ENST00000611963 RHOHQ15669 191 aa5.69□□□□□ -1.5
TARDBP-213ENST00000611963 C12orf74Q32Q52 190 aa5.69□□□□□ -1.5
TARDBP-213ENST00000611963 LCE3BQ5TA77 95 aa5.69□□□□□ -1.5
TARDBP-213ENST00000611963 DNAJC30Q96LL9 226 aa5.69□□□□□ -1.5
TARDBP-213ENST00000611963 C18orf15Q96N68 181 aa5.69□□□□□ -1.5
TARDBP-213ENST00000611963 KIR2DL4Q99706 377 aa5.69□□□□□ -1.5
TARDBP-213ENST00000611963 C11orf68Q9H3H3 251 aaKnown RBP5.69□□□□□ -1.5
TARDBP-213ENST00000611963 TRBV6-4A0A1B0GX49 114 aa5.68□□□□□ -1.5
TARDBP-213ENST00000611963 I3L3M4 83 aa5.68□□□□□ -1.5
TARDBP-213ENST00000611963 CIDEAO60543 219 aa5.68□□□□□ -1.5
TARDBP-213ENST00000611963 RPL36AP83881 106 aaKnown RBP5.68□□□□□ -1.5
TARDBP-213ENST00000611963 ORMDL2Q53FV1 153 aa5.68□□□□□ -1.5
TARDBP-213ENST00000611963 PYY3Q5JQD4 70 aa5.68□□□□□ -1.5
TARDBP-213ENST00000611963 SPATA12Q7Z6I5 190 aa5.68□□□□□ -1.5
TARDBP-213ENST00000611963 RPL36ALQ969Q0 106 aaKnown RBP5.68□□□□□ -1.5
TARDBP-213ENST00000611963 WWC2-AS2Q96NR7 200 aa5.68□□□□□ -1.5
TARDBP-213ENST00000611963 PRADC1Q9BSG0 188 aa5.68□□□□□ -1.5
TARDBP-213ENST00000611963 HSPB8Q9UJY1 196 aa5.68□□□□□ -1.5
TARDBP-213ENST00000611963 HHLA3Q9XRX5 114 aa5.68□□□□□ -1.5
TARDBP-213ENST00000611963 STAB2Q8WWQ8 2551 aa5.67□□□□□ -1.5
TARDBP-213ENST00000611963 DYNC2H1Q8NCM8 4307 aaKnown RBP5.67□□□□□ -1.5
TARDBP-213ENST00000611963 TRBV7-3A0A075B6L6 115 aa5.67□□□□□ -1.5
TARDBP-213ENST00000611963 A0A0J9YY99 117 aa5.67□□□□□ -1.5
TARDBP-213ENST00000611963 TEX48A0A1B0GUV7 120 aa5.67□□□□□ -1.5
TARDBP-213ENST00000611963 F5H768 121 aa5.67□□□□□ -1.5
TARDBP-213ENST00000611963 H0Y8G0 127 aa5.67□□□□□ -1.5
TARDBP-213ENST00000611963 SCGB1D1O95968 90 aa5.67□□□□□ -1.5
TARDBP-213ENST00000611963 ATP5G1P05496 136 aa5.67□□□□□ -1.5
TARDBP-213ENST00000611963 GYPEP15421 78 aa5.67□□□□□ -1.5
TARDBP-213ENST00000611963 CRYBA4P53673 196 aa5.67□□□□□ -1.5
TARDBP-213ENST00000611963 UBE2D3P61077 147 aa5.67□□□□□ -1.5
TARDBP-213ENST00000611963 UBE2D2P62837 147 aa5.67□□□□□ -1.5
TARDBP-213ENST00000611963 RPL39P62891 51 aaKnown RBP5.67□□□□□ -1.5
TARDBP-213ENST00000611963 TOMM6Q96B49 74 aa5.67□□□□□ -1.5
TARDBP-213ENST00000611963 DNAH7Q8WXX0 4024 aa5.67□□□□□ -1.5
TARDBP-213ENST00000611963 K7EMI3 77 aa5.66□□□□□ -1.5
TARDBP-213ENST00000611963 SMIM6P0DI80 62 aa5.66□□□□□ -1.5
TARDBP-213ENST00000611963 LINC00694P0DN24 101 aa5.66□□□□□ -1.5
TARDBP-213ENST00000611963 NANOS2P60321 138 aaKnown RBP5.66□□□□□ -1.5
TARDBP-213ENST00000611963 COTL1Q14019 142 aa5.66□□□□□ -1.5
TARDBP-213ENST00000611963 JOSD1Q15040 202 aaPredicted RBP5.66□□□□□ -1.5
TARDBP-213ENST00000611963 C2orf66Q6UXQ4 117 aa5.66□□□□□ -1.5
TARDBP-213ENST00000611963 Q6ZTC4 211 aa5.66□□□□□ -1.5
TARDBP-213ENST00000611963 Q8N976 141 aa5.66□□□□□ -1.5
TARDBP-213ENST00000611963 IFI27L1Q96BM0 104 aa5.66□□□□□ -1.5
TARDBP-213ENST00000611963 MAP1LC3CQ9BXW4 147 aa5.66□□□□□ -1.5
TARDBP-213ENST00000611963 ZMAT4Q9H898 229 aa5.66□□□□□ -1.5
TARDBP-213ENST00000611963 PRO0255Q9UI72 69 aa5.66□□□□□ -1.5
TARDBP-213ENST00000611963 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.65□□□□□ -1.5
TARDBP-213ENST00000611963 TRAV26-1A0A087WT03 109 aa5.65□□□□□ -1.5
TARDBP-213ENST00000611963 A0A096LPF7 62 aa5.65□□□□□ -1.5
TARDBP-213ENST00000611963 IGKV2-29A2NJV5 120 aaPredicted RBP5.65□□□□□ -1.5
TARDBP-213ENST00000611963 SYS1-DBNDD2H3BUS1 97 aa5.65□□□□□ -1.5
TARDBP-213ENST00000611963 DAZ4Q86SG3 579 aaKnown RBP5.65□□□□□ -1.5
TARDBP-213ENST00000611963 LINC00518Q8N0U6 118 aa5.65□□□□□ -1.5
TARDBP-213ENST00000611963 VSIG2Q96IQ7 327 aa5.65□□□□□ -1.5
TARDBP-213ENST00000611963 SCGB3A1Q96QR1 104 aa5.65□□□□□ -1.5
TARDBP-213ENST00000611963 C12orf57Q99622 126 aa5.65□□□□□ -1.5
TARDBP-213ENST00000611963 CHCHD7Q9BUK0 85 aa5.65□□□□□ -1.5
TARDBP-213ENST00000611963 DAZ3Q9NR90 486 aaKnown RBP5.65□□□□□ -1.5
TARDBP-213ENST00000611963 CYSLTR1Q9Y271 337 aa5.65□□□□□ -1.5
TARDBP-213ENST00000611963 ATP5LO75964 103 aa5.64□□□□□ -1.51
TARDBP-213ENST00000611963 NTM-AS1Q6ZSK4 140 aa5.64□□□□□ -1.51
TARDBP-213ENST00000611963 C20orf203Q8NBC4 194 aa5.64□□□□□ -1.51
TARDBP-213ENST00000611963 C11orf45Q8TAV5 145 aa5.64□□□□□ -1.51
TARDBP-213ENST00000611963 PMCHL2Q9BQD1 86 aa5.64□□□□□ -1.51
TARDBP-213ENST00000611963 RYR3Q15413 4870 aa5.64□□□□□ -1.51
TARDBP-213ENST00000611963 IGIPA6NJ69 53 aa5.63□□□□□ -1.51
TARDBP-213ENST00000611963 ZC2HC1BQ5TFG8 222 aa5.63□□□□□ -1.51
TARDBP-213ENST00000611963 PET117Q6UWS5 81 aa5.63□□□□□ -1.51
TARDBP-213ENST00000611963 ATOH7Q8N100 152 aa5.63□□□□□ -1.51
TARDBP-213ENST00000611963 ATP6V0E2Q8NHE4 81 aa5.63□□□□□ -1.51
TARDBP-213ENST00000611963 OPRPNQ99935 248 aaPredicted RBP5.63□□□□□ -1.51
TARDBP-213ENST00000611963 SACSQ9NZJ4 4579 aa5.63□□□□□ -1.51
TARDBP-213ENST00000611963 C20orf202A1L168 122 aa5.62□□□□□ -1.51
TARDBP-213ENST00000611963 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.62□□□□□ -1.51
TARDBP-213ENST00000611963 PRSS1P07477 247 aa5.62□□□□□ -1.51
TARDBP-213ENST00000611963 G0S2P27469 103 aa5.62□□□□□ -1.51
TARDBP-213ENST00000611963 LINC01545Q5VT33 79 aa5.62□□□□□ -1.51
TARDBP-213ENST00000611963 CEMP1Q6PRD7 247 aaPredicted RBP5.62□□□□□ -1.51
TARDBP-213ENST00000611963 Q6ZN92 141 aa5.62□□□□□ -1.51
TARDBP-213ENST00000611963 ERASQ7Z444 233 aa5.62□□□□□ -1.51
TARDBP-213ENST00000611963 BAALCQ8WXS3 180 aa5.62□□□□□ -1.51
TARDBP-213ENST00000611963 TMEM243Q9BU79 118 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 83.9 ms