RNA–Protein interactions for RNA: ENST00000611132.4

VPS36-207, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 1 (best) BASIC

Gene VPS36, Length 4,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-207ENST00000611132 IGIPA6NJ69 53 aa10.96□□□□□ -0.65
VPS36-207ENST00000611132 F8W735 103 aaPredicted RBP10.96□□□□□ -0.66
VPS36-207ENST00000611132 CCDC179H3BU77 68 aa10.96□□□□□ -0.66
VPS36-207ENST00000611132 TMEM263Q8WUH6 116 aaKnown RBP10.96□□□□□ -0.66
VPS36-207ENST00000611132 MAPK1IP1LQ8NDC0 245 aa10.96□□□□□ -0.66
VPS36-207ENST00000611132 CDKN2A-AS1Q9UH64 79 aa10.96□□□□□ -0.66
VPS36-207ENST00000611132 DAZ2Q13117 558 aaKnown RBP10.95□□□□□ -0.66
VPS36-207ENST00000611132 DEFB136Q30KP8 78 aa10.95□□□□□ -0.66
VPS36-207ENST00000611132 DAZ4Q86SG3 579 aaKnown RBP10.95□□□□□ -0.66
VPS36-207ENST00000611132 APRG1Q8IVJ8 170 aa10.95□□□□□ -0.66
VPS36-207ENST00000611132 DAZ3Q9NR90 486 aaKnown RBP10.95□□□□□ -0.66
VPS36-207ENST00000611132 PTPN13Q12923 2485 aa10.95□□□□□ -0.66
VPS36-207ENST00000611132 UQCRQO14949 82 aa10.95□□□□□ -0.66
VPS36-207ENST00000611132 LMO4P61968 165 aa10.95□□□□□ -0.66
VPS36-207ENST00000611132 C5orf38Q86SI9 138 aa10.95□□□□□ -0.66
VPS36-207ENST00000611132 COX7B2Q8TF08 81 aa10.94□□□□□ -0.66
VPS36-207ENST00000611132 NOP10Q9NPE3 64 aaKnown RBP10.94□□□□□ -0.66
VPS36-207ENST00000611132 MUC6Q6W4X9 2439 aa10.94□□□□□ -0.66
VPS36-207ENST00000611132 LECT2O14960 151 aa10.93□□□□□ -0.66
VPS36-207ENST00000611132 SLURP1P55000 103 aa10.93□□□□□ -0.66
VPS36-207ENST00000611132 Q9HAA7 133 aa10.93□□□□□ -0.66
VPS36-207ENST00000611132 K7EQD1 137 aa10.93□□□□□ -0.66
VPS36-207ENST00000611132 VPREB3Q9UKI3 123 aa10.93□□□□□ -0.66
VPS36-207ENST00000611132 Q6Q795 121 aa10.93□□□□□ -0.66
VPS36-207ENST00000611132 MIR7-3HGQ8N6C7 128 aa10.93□□□□□ -0.66
VPS36-207ENST00000611132 PYGO1Q9Y3Y4 419 aa10.93□□□□□ -0.66
VPS36-207ENST00000611132 A6NDX4 124 aa10.92□□□□□ -0.66
VPS36-207ENST00000611132 J3QLI3 93 aa10.92□□□□□ -0.66
VPS36-207ENST00000611132 LST1O00453 97 aa10.92□□□□□ -0.66
VPS36-207ENST00000611132 PTPRBP23467 1997 aa10.92□□□□□ -0.66
VPS36-207ENST00000611132 RNF223E7ERA6 249 aa10.92□□□□□ -0.66
VPS36-207ENST00000611132 TSHBP01222 138 aa10.92□□□□□ -0.66
VPS36-207ENST00000611132 TMEM61Q8N0U2 210 aa10.92□□□□□ -0.66
VPS36-207ENST00000611132 IGLV4-69A0A075B6H9 119 aa10.92□□□□□ -0.66
VPS36-207ENST00000611132 HIST2H2BCQ6DN03 193 aa10.92□□□□□ -0.66
VPS36-207ENST00000611132 HIST2H2BDQ6DRA6 164 aa10.92□□□□□ -0.66
VPS36-207ENST00000611132 LINC00308Q8TCZ7 52 aa10.92□□□□□ -0.66
VPS36-207ENST00000611132 PRRC2CQ9Y520 2896 aaKnown RBP10.92□□□□□ -0.66
VPS36-207ENST00000611132 CDIP1Q9H305 208 aa10.91□□□□□ -0.66
VPS36-207ENST00000611132 MYO9AB2RTY4 2548 aa10.91□□□□□ -0.66
VPS36-207ENST00000611132 CACNA1AO00555 2505 aa10.91□□□□□ -0.66
VPS36-207ENST00000611132 KLLNB2CW77 178 aa10.91□□□□□ -0.66
VPS36-207ENST00000611132 K7EQG2 157 aa10.91□□□□□ -0.66
VPS36-207ENST00000611132 XCL1P47992 114 aa10.91□□□□□ -0.66
VPS36-207ENST00000611132 CRIP2P52943 208 aaPredicted RBP10.91□□□□□ -0.66
VPS36-207ENST00000611132 DSCR8Q96T75 97 aa10.91□□□□□ -0.66
VPS36-207ENST00000611132 LINC00467Q9BRT7 94 aa10.91□□□□□ -0.66
VPS36-207ENST00000611132 IMUPQ9GZP8 106 aa10.9□□□□□ -0.66
VPS36-207ENST00000611132 ATRXP46100 2492 aa10.9□□□□□ -0.66
VPS36-207ENST00000611132 IGHV4-30-2A0A087WSY4 118 aa10.9□□□□□ -0.66
VPS36-207ENST00000611132 LINC01546A6NGU7 62 aa10.9□□□□□ -0.66
VPS36-207ENST00000611132 TSPEAR-AS2P59090 65 aa10.9□□□□□ -0.66
VPS36-207ENST00000611132 H7C423 109 aa10.89□□□□□ -0.67
VPS36-207ENST00000611132 C3orf22Q8N5N4 141 aa10.89□□□□□ -0.67
VPS36-207ENST00000611132 TMEM89A2RUT3 159 aa10.89□□□□□ -0.67
VPS36-207ENST00000611132 A8MZ25 164 aa10.89□□□□□ -0.67
VPS36-207ENST00000611132 C10orf105Q8TEF2 133 aa10.89□□□□□ -0.67
VPS36-207ENST00000611132 CRYGDP07320 174 aa10.89□□□□□ -0.67
VPS36-207ENST00000611132 C14orf132Q9NPU4 83 aa10.89□□□□□ -0.67
VPS36-207ENST00000611132 NDUFA1O15239 70 aa10.89□□□□□ -0.67
VPS36-207ENST00000611132 TIMM17BO60830 172 aa10.88□□□□□ -0.67
VPS36-207ENST00000611132 CUL9Q8IWT3 2517 aa10.88□□□□□ -0.67
VPS36-207ENST00000611132 RAI1Q7Z5J4 1906 aaPredicted RBP10.88□□□□□ -0.67
VPS36-207ENST00000611132 CLPSL2Q6UWE3 100 aa10.88□□□□□ -0.67
VPS36-207ENST00000611132 JMJD7-PLA2G4BH0Y9G9 81 aa10.87□□□□□ -0.67
VPS36-207ENST00000611132 TIRAPP58753 221 aa10.87□□□□□ -0.67
VPS36-207ENST00000611132 PRO0461Q9UI25 63 aa10.87□□□□□ -0.67
VPS36-207ENST00000611132 C9orf85Q96MD7 179 aa10.86□□□□□ -0.67
VPS36-207ENST00000611132 TRBV10-1A0A0K0K1A3 114 aa10.86□□□□□ -0.67
VPS36-207ENST00000611132 FAM240AA0A1B0GVK7 77 aa10.86□□□□□ -0.67
VPS36-207ENST00000611132 C11orf71Q6IPW1 123 aa10.86□□□□□ -0.67
VPS36-207ENST00000611132 PROK1P58294 105 aa10.85□□□□□ -0.67
VPS36-207ENST00000611132 SDIM1Q6ZPB5 146 aa10.85□□□□□ -0.67
VPS36-207ENST00000611132 hADV29S1A0JD25 119 aa10.85□□□□□ -0.67
VPS36-207ENST00000611132 MRPS36P82909 103 aaKnown RBP10.85□□□□□ -0.67
VPS36-207ENST00000611132 SMCPP49901 116 aaPredicted RBP10.84□□□□□ -0.67
VPS36-207ENST00000611132 NDUFA7O95182 113 aa10.84□□□□□ -0.67
VPS36-207ENST00000611132 ANGP03950 147 aaKnown RBP10.84□□□□□ -0.67
VPS36-207ENST00000611132 CHD7Q9P2D1 2997 aa10.84□□□□□ -0.67
VPS36-207ENST00000611132 RBM3P98179 157 aaKnown RBP10.83□□□□□ -0.68
VPS36-207ENST00000611132 PRO3102Q9H379 93 aa10.83□□□□□ -0.68
VPS36-207ENST00000611132 C5orf42Q9H799 3197 aa10.83□□□□□ -0.68
VPS36-207ENST00000611132 PSMB8P28062 276 aa10.83□□□□□ -0.68
VPS36-207ENST00000611132 NBL1P41271 181 aa10.83□□□□□ -0.68
VPS36-207ENST00000611132 PIK3CD-AS1Q5SR53 167 aa10.83□□□□□ -0.68
VPS36-207ENST00000611132 A0A096LPF7 62 aa10.83□□□□□ -0.68
VPS36-207ENST00000611132 IGF2RP11717 2491 aa10.83□□□□□ -0.68
VPS36-207ENST00000611132 POM121L12Q8N7R1 296 aa10.81□□□□□ -0.68
VPS36-207ENST00000611132 C16orf74Q96GX8 76 aa10.81□□□□□ -0.68
VPS36-207ENST00000611132 M0QXV9 152 aa10.8□□□□□ -0.68
VPS36-207ENST00000611132 DCANP1Q8TF63 244 aa10.8□□□□□ -0.68
VPS36-207ENST00000611132 UBE2D4Q9Y2X8 147 aa10.8□□□□□ -0.68
VPS36-207ENST00000611132 MAP6D1Q9H9H5 199 aa10.8□□□□□ -0.68
VPS36-207ENST00000611132 TMEM256-PLSCR3K7ERE1 68 aa10.79□□□□□ -0.68
VPS36-207ENST00000611132 CCL24O00175 119 aa10.79□□□□□ -0.68
VPS36-207ENST00000611132 PRRC2AP48634 2157 aaKnown RBP10.79□□□□□ -0.68
VPS36-207ENST00000611132 SVIPQ8NHG7 77 aa10.79□□□□□ -0.68
VPS36-207ENST00000611132 HTTP42858 3142 aa10.79□□□□□ -0.68
VPS36-207ENST00000611132 ZNF561-AS1K7EIQ3 104 aa10.78□□□□□ -0.68
VPS36-207ENST00000611132 COX7CP15954 63 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms