RNA–Protein interactions for RNA: ENST00000602492.5

PPFIA3-204, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 4

Gene PPFIA3, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-204ENST00000602492 NUP35Q8NFH5 326 aa13.25□□□□□ -0.29
PPFIA3-204ENST00000602492 BORCS7Q96B45 105 aa13.25□□□□□ -0.29
PPFIA3-204ENST00000602492 DNAJC30Q96LL9 226 aa13.25□□□□□ -0.29
PPFIA3-204ENST00000602492 CHAC1Q9BUX1 264 aa13.25□□□□□ -0.29
PPFIA3-204ENST00000602492 FAT3Q8TDW7 4589 aa13.25□□□□□ -0.29
PPFIA3-204ENST00000602492 HMCN2Q8NDA2 5059 aa13.24□□□□□ -0.29
PPFIA3-204ENST00000602492 A0A087WX48 190 aa13.24□□□□□ -0.29
PPFIA3-204ENST00000602492 ARMS2P0C7Q2 107 aa13.24□□□□□ -0.29
PPFIA3-204ENST00000602492 CACNG7P62955 275 aa13.24□□□□□ -0.29
PPFIA3-204ENST00000602492 ELOBQ15370 118 aa13.24□□□□□ -0.29
PPFIA3-204ENST00000602492 UBE2WQ96B02 151 aa13.24□□□□□ -0.29
PPFIA3-204ENST00000602492 YPEL4Q96NS1 127 aa13.24□□□□□ -0.29
PPFIA3-204ENST00000602492 A0A1B0GUT8 65 aa13.23□□□□□ -0.29
PPFIA3-204ENST00000602492 GZMBP10144 247 aa13.23□□□□□ -0.29
PPFIA3-204ENST00000602492 COX19Q49B96 90 aa13.23□□□□□ -0.29
PPFIA3-204ENST00000602492 CBLN2Q8IUK8 224 aa13.23□□□□□ -0.29
PPFIA3-204ENST00000602492 CHCHD7Q9BUK0 85 aa13.23□□□□□ -0.29
PPFIA3-204ENST00000602492 GRIFINA4D1Z8 144 aa13.22□□□□□ -0.29
PPFIA3-204ENST00000602492 S100A8P05109 93 aa13.22□□□□□ -0.29
PPFIA3-204ENST00000602492 PHLDA3Q9Y5J5 127 aa13.22□□□□□ -0.29
PPFIA3-204ENST00000602492 A0A087WWL8 130 aa13.21□□□□□ -0.29
PPFIA3-204ENST00000602492 RIGQ13278 110 aa13.21□□□□□ -0.29
PPFIA3-204ENST00000602492 LYZL1Q6UWQ5 148 aa13.21□□□□□ -0.29
PPFIA3-204ENST00000602492 ZFP82Q8N141 532 aa13.21□□□□□ -0.29
PPFIA3-204ENST00000602492 SERTAD4-AS1Q5TG53 156 aa13.2□□□□□ -0.3
PPFIA3-204ENST00000602492 CIRBP-AS1Q8TBR5 109 aa13.2□□□□□ -0.3
PPFIA3-204ENST00000602492 PGLYRP4Q96LB8 373 aa13.2□□□□□ -0.3
PPFIA3-204ENST00000602492 TRBV10-1A0A0K0K1A3 114 aa13.19□□□□□ -0.3
PPFIA3-204ENST00000602492 A0A1B0GXF2 115 aa13.19□□□□□ -0.3
PPFIA3-204ENST00000602492 M0R381 172 aa13.19□□□□□ -0.3
PPFIA3-204ENST00000602492 SCO1O75880 301 aa13.19□□□□□ -0.3
PPFIA3-204ENST00000602492 KRTAP10-4P60372 401 aaPredicted RBP13.19□□□□□ -0.3
PPFIA3-204ENST00000602492 RPL36AP83881 106 aaKnown RBP13.19□□□□□ -0.3
PPFIA3-204ENST00000602492 Q0VG73 95 aa13.19□□□□□ -0.3
PPFIA3-204ENST00000602492 RPL36ALQ969Q0 106 aaKnown RBP13.19□□□□□ -0.3
PPFIA3-204ENST00000602492 HBBP68871 147 aa13.18□□□□□ -0.3
PPFIA3-204ENST00000602492 C14orf177Q52M58 125 aa13.18□□□□□ -0.3
PPFIA3-204ENST00000602492 GATD1Q8NB37 220 aa13.18□□□□□ -0.3
PPFIA3-204ENST00000602492 TPPP3Q9BW30 176 aa13.18□□□□□ -0.3
PPFIA3-204ENST00000602492 PKHD1L1Q86WI1 4243 aa13.18□□□□□ -0.3
PPFIA3-204ENST00000602492 OXTP01178 125 aa13.17□□□□□ -0.3
PPFIA3-204ENST00000602492 UBE2D3P61077 147 aa13.17□□□□□ -0.3
PPFIA3-204ENST00000602492 UBE2D2P62837 147 aa13.17□□□□□ -0.3
PPFIA3-204ENST00000602492 SPANXN1Q5VSR9 72 aa13.17□□□□□ -0.3
PPFIA3-204ENST00000602492 OR10AG1Q8NH19 301 aa13.17□□□□□ -0.3
PPFIA3-204ENST00000602492 C1orf43Q9BWL3 253 aa13.17□□□□□ -0.3
PPFIA3-204ENST00000602492 TRBV7-3A0A075B6L6 115 aa13.16□□□□□ -0.3
PPFIA3-204ENST00000602492 TMEM262E9PQX1 116 aa13.16□□□□□ -0.3
PPFIA3-204ENST00000602492 MT-ND6P03923 174 aa13.16□□□□□ -0.3
PPFIA3-204ENST00000602492 TRGC1P0CF51 173 aa13.16□□□□□ -0.3
PPFIA3-204ENST00000602492 COLCA2A8K830 154 aa13.15□□□□□ -0.3
PPFIA3-204ENST00000602492 CRPP02741 224 aa13.15□□□□□ -0.3
PPFIA3-204ENST00000602492 NTF3P20783 257 aa13.15□□□□□ -0.3
PPFIA3-204ENST00000602492 AP1S3Q96PC3 154 aa13.15□□□□□ -0.3
PPFIA3-204ENST00000602492 TGIF2-C20orf24A0A0A6YYL0 155 aa13.14□□□□□ -0.31
PPFIA3-204ENST00000602492 MRPL54Q6P161 138 aaKnown RBP13.14□□□□□ -0.31
PPFIA3-204ENST00000602492 SMIM15Q7Z3B0 74 aa13.14□□□□□ -0.31
PPFIA3-204ENST00000602492 GNB1LQ9BYB4 327 aa13.14□□□□□ -0.31
PPFIA3-204ENST00000602492 TRBV6-8A0A0A6YYG3 113 aa13.13□□□□□ -0.31
PPFIA3-204ENST00000602492 HLA-DQA1P01909 254 aa13.13□□□□□ -0.31
PPFIA3-204ENST00000602492 TWIST1Q15672 202 aa13.13□□□□□ -0.31
PPFIA3-204ENST00000602492 TMEM191AQ9H0A3 160 aa13.13□□□□□ -0.31
PPFIA3-204ENST00000602492 UBR4Q5T4S7 5183 aa13.13□□□□□ -0.31
PPFIA3-204ENST00000602492 ENHOQ6UWT2 76 aa13.12□□□□□ -0.31
PPFIA3-204ENST00000602492 RAB5AP20339 215 aa13.11□□□□□ -0.31
PPFIA3-204ENST00000602492 ANGP03950 147 aaKnown RBP13.1□□□□□ -0.31
PPFIA3-204ENST00000602492 RAB4BP61018 213 aa13.1□□□□□ -0.31
PPFIA3-204ENST00000602492 RPL37AP61513 92 aaKnown RBP13.1□□□□□ -0.31
PPFIA3-204ENST00000602492 PKIAP61925 76 aa13.1□□□□□ -0.31
PPFIA3-204ENST00000602492 ZNF56Q15929 161 aa13.1□□□□□ -0.31
PPFIA3-204ENST00000602492 MPV17L2Q567V2 206 aa13.1□□□□□ -0.31
PPFIA3-204ENST00000602492 NEXN-AS1Q8NBZ9 246 aa13.1□□□□□ -0.31
PPFIA3-204ENST00000602492 USP17L23D6RBM5 183 aa13.09□□□□□ -0.31
PPFIA3-204ENST00000602492 CAMPP49913 170 aa13.09□□□□□ -0.31
PPFIA3-204ENST00000602492 TMEM136Q6ZRR5 245 aa13.09□□□□□ -0.31
PPFIA3-204ENST00000602492 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.09□□□□□ -0.31
PPFIA3-204ENST00000602492 CHCHD5Q9BSY4 110 aa13.09□□□□□ -0.31
PPFIA3-204ENST00000602492 DPH3P1Q9H4G8 78 aa13.08□□□□□ -0.32
PPFIA3-204ENST00000602492 MUC21A0A0G2JKD1 596 aa13.07□□□□□ -0.32
PPFIA3-204ENST00000602492 MUC21A0A140T8X8 626 aa13.07□□□□□ -0.32
PPFIA3-204ENST00000602492 SMIM17P0DL12 118 aa13.07□□□□□ -0.32
PPFIA3-204ENST00000602492 MIAQ16674 131 aa13.07□□□□□ -0.32
PPFIA3-204ENST00000602492 PLA2G2DQ9UNK4 145 aa13.07□□□□□ -0.32
PPFIA3-204ENST00000602492 FAM104BQ5XKR9 115 aa13.06□□□□□ -0.32
PPFIA3-204ENST00000602492 KIF25-AS1Q9Y6Z4 181 aa13.06□□□□□ -0.32
PPFIA3-204ENST00000602492 PRSS1P07477 247 aa13.05□□□□□ -0.32
PPFIA3-204ENST00000602492 DGAT2L7PQ6IED9 249 aa13.05□□□□□ -0.32
PPFIA3-204ENST00000602492 PPBPP02775 128 aa13.04□□□□□ -0.32
PPFIA3-204ENST00000602492 RPS10P46783 165 aaKnown RBP13.04□□□□□ -0.32
PPFIA3-204ENST00000602492 TMEM97Q5BJF2 176 aa13.04□□□□□ -0.32
PPFIA3-204ENST00000602492 TRAPPC1Q9Y5R8 145 aa13.04□□□□□ -0.32
PPFIA3-204ENST00000602492 F5H697 171 aa13.03□□□□□ -0.32
PPFIA3-204ENST00000602492 APCSP02743 223 aa13.03□□□□□ -0.32
PPFIA3-204ENST00000602492 C9orf163Q8N9P6 203 aa13.03□□□□□ -0.32
PPFIA3-204ENST00000602492 MRAP2Q96G30 205 aa13.03□□□□□ -0.32
PPFIA3-204ENST00000602492 MRPL18Q9H0U6 180 aaKnown RBP13.03□□□□□ -0.32
PPFIA3-204ENST00000602492 SSTP61278 116 aa13.02□□□□□ -0.33
PPFIA3-204ENST00000602492 PPP1R17O96001 155 aa13.01□□□□□ -0.33
PPFIA3-204ENST00000602492 RAB4AP20338 218 aa13.01□□□□□ -0.33
PPFIA3-204ENST00000602492 HNRNPA3P51991 378 aaKnown RBP13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms