RNA–Protein interactions for RNA: ENST00000591545.5

SMARCA4-216, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 5,193 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-216ENST00000591545 TTTY13Q9BZ97 58 aa10.1□□□□□ -0.79
SMARCA4-216ENST00000591545 MDFICQ9P1T7 246 aa10.1□□□□□ -0.79
SMARCA4-216ENST00000591545 A0A0J9YX75 114 aa10.1□□□□□ -0.79
SMARCA4-216ENST00000591545 LECT2O14960 151 aa10.1□□□□□ -0.79
SMARCA4-216ENST00000591545 ODF3Q96PU9 254 aa10.1□□□□□ -0.79
SMARCA4-216ENST00000591545 PRO0255Q9UI72 69 aa10.1□□□□□ -0.79
SMARCA4-216ENST00000591545 LINC00643Q86TS7 51 aa10.1□□□□□ -0.79
SMARCA4-216ENST00000591545 DIRC1Q969H9 104 aa10.09□□□□□ -0.79
SMARCA4-216ENST00000591545 MIAQ16674 131 aa10.09□□□□□ -0.79
SMARCA4-216ENST00000591545 CHD3Q12873 2000 aaKnown RBP10.09□□□□□ -0.79
SMARCA4-216ENST00000591545 RNF183Q96D59 192 aa10.08□□□□□ -0.8
SMARCA4-216ENST00000591545 IGLV10-54A0A075B6I4 117 aa10.08□□□□□ -0.8
SMARCA4-216ENST00000591545 IGKV1D-37A0A075B6S9 117 aa10.08□□□□□ -0.8
SMARCA4-216ENST00000591545 E7EUB6 86 aa10.08□□□□□ -0.8
SMARCA4-216ENST00000591545 SMIM9A6NGZ8 99 aa10.08□□□□□ -0.8
SMARCA4-216ENST00000591545 LINC01548A6NM66 108 aa10.07□□□□□ -0.8
SMARCA4-216ENST00000591545 CCDC140Q96MF4 163 aa10.07□□□□□ -0.8
SMARCA4-216ENST00000591545 MED12LQ86YW9 2145 aa10.07□□□□□ -0.8
SMARCA4-216ENST00000591545 SPAG11BQ08648 103 aa10.07□□□□□ -0.8
SMARCA4-216ENST00000591545 IGHV4-4A0A075B6R2 117 aa10.07□□□□□ -0.8
SMARCA4-216ENST00000591545 IGLV2-8P01709 118 aa10.07□□□□□ -0.8
SMARCA4-216ENST00000591545 EBI3Q14213 229 aa10.07□□□□□ -0.8
SMARCA4-216ENST00000591545 DEFB114Q30KQ6 69 aa10.07□□□□□ -0.8
SMARCA4-216ENST00000591545 CRIP3Q6Q6R5 217 aa10.06□□□□□ -0.8
SMARCA4-216ENST00000591545 MIR7-3HGQ8N6C7 128 aa10.06□□□□□ -0.8
SMARCA4-216ENST00000591545 SORL1Q92673 2214 aa10.06□□□□□ -0.8
SMARCA4-216ENST00000591545 CRYGBP07316 175 aa10.06□□□□□ -0.8
SMARCA4-216ENST00000591545 IGLC6P0CF74 106 aa10.06□□□□□ -0.8
SMARCA4-216ENST00000591545 DAND5Q8N907 189 aa10.06□□□□□ -0.8
SMARCA4-216ENST00000591545 CLEC2BQ92478 149 aa10.06□□□□□ -0.8
SMARCA4-216ENST00000591545 HIGD2BQ4VC39 106 aa10.06□□□□□ -0.8
SMARCA4-216ENST00000591545 FRMD6-AS1P0C7T7 363 aa10.05□□□□□ -0.8
SMARCA4-216ENST00000591545 MBD6Q96DN6 1003 aa10.05□□□□□ -0.8
SMARCA4-216ENST00000591545 WFDC9Q8NEX5 89 aa10.05□□□□□ -0.8
SMARCA4-216ENST00000591545 MLST8Q9BVC4 326 aa10.05□□□□□ -0.8
SMARCA4-216ENST00000591545 TRAV26-1A0A087WT03 109 aa10.05□□□□□ -0.8
SMARCA4-216ENST00000591545 CHKB-CPT1BH3BT56 60 aa10.05□□□□□ -0.8
SMARCA4-216ENST00000591545 LINC01006Q8NI28 216 aa10.05□□□□□ -0.8
SMARCA4-216ENST00000591545 PRRC2AP48634 2157 aaKnown RBP10.05□□□□□ -0.8
SMARCA4-216ENST00000591545 C5orf47Q569G3 176 aa10.04□□□□□ -0.8
SMARCA4-216ENST00000591545 PSMG3-AS1Q96PY0 264 aa10.04□□□□□ -0.8
SMARCA4-216ENST00000591545 PIEZO2Q9H5I5 2752 aa10.04□□□□□ -0.8
SMARCA4-216ENST00000591545 NCR3O14931 201 aa10.04□□□□□ -0.8
SMARCA4-216ENST00000591545 LYRM9A8MSI8 78 aa10.04□□□□□ -0.8
SMARCA4-216ENST00000591545 C14orf177Q52M58 125 aa10.04□□□□□ -0.8
SMARCA4-216ENST00000591545 KLK12Q9UKR0 248 aa10.03□□□□□ -0.8
SMARCA4-216ENST00000591545 TLN1Q9Y490 2541 aaKnown RBP10.03□□□□□ -0.8
SMARCA4-216ENST00000591545 WDR87Q6ZQQ6 2873 aa10.03□□□□□ -0.8
SMARCA4-216ENST00000591545 NFE4Q86UQ8 179 aa10.03□□□□□ -0.8
SMARCA4-216ENST00000591545 PRR14LQ5THK1 2151 aa10.03□□□□□ -0.8
SMARCA4-216ENST00000591545 DEFB1P60022 68 aa10.03□□□□□ -0.8
SMARCA4-216ENST00000591545 RBX1P62877 108 aa10.03□□□□□ -0.8
SMARCA4-216ENST00000591545 HIST2H2BDQ6DRA6 164 aa10.03□□□□□ -0.8
SMARCA4-216ENST00000591545 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.03□□□□□ -0.8
SMARCA4-216ENST00000591545 YPEL4Q96NS1 127 aa10.03□□□□□ -0.8
SMARCA4-216ENST00000591545 A0A0J9YXY3 114 aa10.02□□□□□ -0.8
SMARCA4-216ENST00000591545 TCL1BO95988 128 aa10.02□□□□□ -0.8
SMARCA4-216ENST00000591545 IGHV4-28A0A0C4DH34 117 aa10.02□□□□□ -0.81
SMARCA4-216ENST00000591545 SPANXB1Q9NS25 103 aaPredicted RBP10.02□□□□□ -0.81
SMARCA4-216ENST00000591545 K7EQG2 157 aa10.02□□□□□ -0.81
SMARCA4-216ENST00000591545 DEFB131BA0A096LNP1 70 aa10.02□□□□□ -0.81
SMARCA4-216ENST00000591545 H7C423 109 aa10.02□□□□□ -0.81
SMARCA4-216ENST00000591545 COX7BP24311 80 aa10.02□□□□□ -0.81
SMARCA4-216ENST00000591545 LY6LH3BQJ8 138 aa10.01□□□□□ -0.81
SMARCA4-216ENST00000591545 ATP5EP2Q5VTU8 51 aa10.01□□□□□ -0.81
SMARCA4-216ENST00000591545 CHD8Q9HCK8 2581 aa10.01□□□□□ -0.81
SMARCA4-216ENST00000591545 NACAE9PAV3 2078 aa10.01□□□□□ -0.81
SMARCA4-216ENST00000591545 FAM222AQ5U5X8 452 aa10.01□□□□□ -0.81
SMARCA4-216ENST00000591545 Q6ZUT4 128 aa10.01□□□□□ -0.81
SMARCA4-216ENST00000591545 ZNF702PQ9H963 129 aa10.01□□□□□ -0.81
SMARCA4-216ENST00000591545 UFSP1Q6NVU6 142 aa10.01□□□□□ -0.81
SMARCA4-216ENST00000591545 Q6ZPA2 131 aa10.01□□□□□ -0.81
SMARCA4-216ENST00000591545 NEXN-AS1Q8NBZ9 246 aa10.01□□□□□ -0.81
SMARCA4-216ENST00000591545 MIFP14174 115 aa10□□□□□ -0.81
SMARCA4-216ENST00000591545 ZNF80P51504 273 aaPredicted RBP10□□□□□ -0.81
SMARCA4-216ENST00000591545 UBE2AP49459 152 aa10□□□□□ -0.81
SMARCA4-216ENST00000591545 CDSNQ15517 529 aa10□□□□□ -0.81
SMARCA4-216ENST00000591545 GDF5OSQ5U4N7 250 aa9.99□□□□□ -0.81
SMARCA4-216ENST00000591545 PROP1O75360 226 aa9.99□□□□□ -0.81
SMARCA4-216ENST00000591545 EIF4EBP1Q13541 118 aaPredicted RBP9.99□□□□□ -0.81
SMARCA4-216ENST00000591545 LINC00322Q6ZN03 302 aaPredicted RBP9.99□□□□□ -0.81
SMARCA4-216ENST00000591545 ZNF295-AS1Q8N0V1 137 aa9.99□□□□□ -0.81
SMARCA4-216ENST00000591545 BRWD1-AS2P59051 145 aa9.99□□□□□ -0.81
SMARCA4-216ENST00000591545 PTH2Q96A98 100 aa9.98□□□□□ -0.81
SMARCA4-216ENST00000591545 KRTAP10-9P60411 292 aa9.98□□□□□ -0.81
SMARCA4-216ENST00000591545 ZFAND2AQ8N6M9 145 aa9.97□□□□□ -0.81
SMARCA4-216ENST00000591545 LINC00482Q8N8I6 264 aa9.97□□□□□ -0.81
SMARCA4-216ENST00000591545 UQCRQO14949 82 aa9.97□□□□□ -0.81
SMARCA4-216ENST00000591545 U3KQK5 164 aa9.97□□□□□ -0.81
SMARCA4-216ENST00000591545 P0DMU3 169 aa9.97□□□□□ -0.81
SMARCA4-216ENST00000591545 FAM231AP0DMU4 169 aa9.97□□□□□ -0.81
SMARCA4-216ENST00000591545 FAM231CP0DMU5 169 aa9.97□□□□□ -0.81
SMARCA4-216ENST00000591545 NDUFA7O95182 113 aa9.96□□□□□ -0.81
SMARCA4-216ENST00000591545 C4orf48Q5BLP8 95 aa9.96□□□□□ -0.81
SMARCA4-216ENST00000591545 FAM110AQ9BQ89 295 aa9.96□□□□□ -0.81
SMARCA4-216ENST00000591545 C14orf132Q9NPU4 83 aa9.96□□□□□ -0.81
SMARCA4-216ENST00000591545 HTTP42858 3142 aa9.96□□□□□ -0.81
SMARCA4-216ENST00000591545 NDUFV3P56181 108 aaKnown RBP9.96□□□□□ -0.81
SMARCA4-216ENST00000591545 TMEM223A0PJW6 202 aa9.96□□□□□ -0.82
SMARCA4-216ENST00000591545 TRAV10A0A0B4J240 114 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms