RNA–Protein interactions for RNA: ENST00000586417.5

ATG4D-204, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 2

Gene ATG4D, Length 1,752 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-204ENST00000586417 ZMAT4Q9H898 229 aa14.48□□□□□ -0.09
ATG4D-204ENST00000586417 DKK2Q9UBU2 259 aa14.48□□□□□ -0.09
ATG4D-204ENST00000586417 FBN3Q75N90 2809 aa14.48□□□□□ -0.09
ATG4D-204ENST00000586417 TRBV10-1A0A0K0K1A3 114 aa14.47□□□□□ -0.09
ATG4D-204ENST00000586417 hDV102S1A0JD36 115 aa14.47□□□□□ -0.09
ATG4D-204ENST00000586417 LINC01549A6NIU2 74 aa14.47□□□□□ -0.09
ATG4D-204ENST00000586417 DDTP30046 118 aa14.47□□□□□ -0.09
ATG4D-204ENST00000586417 IGIPA6NJ69 53 aa14.47□□□□□ -0.09
ATG4D-204ENST00000586417 IGHV4-28A0A0C4DH34 117 aa14.46□□□□□ -0.09
ATG4D-204ENST00000586417 C20orf203Q8NBC4 194 aa14.46□□□□□ -0.09
ATG4D-204ENST00000586417 Q6ZN92 141 aa14.45□□□□□ -0.1
ATG4D-204ENST00000586417 Q8NAQ8 132 aa14.45□□□□□ -0.1
ATG4D-204ENST00000586417 DNAH9Q9NYC9 4486 aa14.45□□□□□ -0.1
ATG4D-204ENST00000586417 TRBV7-3A0A075B6L6 115 aa14.45□□□□□ -0.1
ATG4D-204ENST00000586417 TRAV12-1A0A0B4J245 112 aa14.45□□□□□ -0.1
ATG4D-204ENST00000586417 DEFB130BP0DP73 79 aa14.45□□□□□ -0.1
ATG4D-204ENST00000586417 DEFB130AP0DP74 79 aa14.45□□□□□ -0.1
ATG4D-204ENST00000586417 FHL2Q14192 279 aa14.45□□□□□ -0.1
ATG4D-204ENST00000586417 ZNRF2Q8NHG8 242 aa14.45□□□□□ -0.1
ATG4D-204ENST00000586417 BAALCQ8WXS3 180 aa14.45□□□□□ -0.1
ATG4D-204ENST00000586417 TM2D3Q9BRN9 247 aa14.45□□□□□ -0.1
ATG4D-204ENST00000586417 A0A087WX48 190 aa14.44□□□□□ -0.1
ATG4D-204ENST00000586417 TRBV6-4A0A1B0GX49 114 aa14.44□□□□□ -0.1
ATG4D-204ENST00000586417 LYRM9A8MSI8 78 aa14.44□□□□□ -0.1
ATG4D-204ENST00000586417 MIFP14174 115 aa14.44□□□□□ -0.1
ATG4D-204ENST00000586417 PHLDA1Q8WV24 401 aaPredicted RBP14.44□□□□□ -0.1
ATG4D-204ENST00000586417 TIMM17AQ99595 171 aa14.44□□□□□ -0.1
ATG4D-204ENST00000586417 B9D2Q9BPU9 175 aa14.44□□□□□ -0.1
ATG4D-204ENST00000586417 HUWE1Q7Z6Z7 4374 aaKnown RBP14.43□□□□□ -0.1
ATG4D-204ENST00000586417 IGHV3-38A0A0C4DH36 116 aa14.43□□□□□ -0.1
ATG4D-204ENST00000586417 IGLC3P0DOY3 106 aa14.43□□□□□ -0.1
ATG4D-204ENST00000586417 FAM222AQ5U5X8 452 aa14.43□□□□□ -0.1
ATG4D-204ENST00000586417 TRGV4A0A0C4DH28 118 aa14.42□□□□□ -0.1
ATG4D-204ENST00000586417 DEFB4AO15263 64 aa14.42□□□□□ -0.1
ATG4D-204ENST00000586417 RPL36AP83881 106 aaKnown RBP14.42□□□□□ -0.1
ATG4D-204ENST00000586417 RPL36ALQ969Q0 106 aaKnown RBP14.42□□□□□ -0.1
ATG4D-204ENST00000586417 CHCHD7Q9BUK0 85 aa14.42□□□□□ -0.1
ATG4D-204ENST00000586417 MRPL35Q9NZE8 188 aaKnown RBP14.42□□□□□ -0.1
ATG4D-204ENST00000586417 TMEM141Q96I45 108 aa14.42□□□□□ -0.1
ATG4D-204ENST00000586417 MIEN1Q9BRT3 115 aa14.42□□□□□ -0.1
ATG4D-204ENST00000586417 UBE2D3P61077 147 aa14.41□□□□□ -0.1
ATG4D-204ENST00000586417 UBE2D2P62837 147 aa14.41□□□□□ -0.1
ATG4D-204ENST00000586417 SPATA25Q9BR10 227 aa14.41□□□□□ -0.1
ATG4D-204ENST00000586417 HSBP1L1C9JCN9 74 aa14.4□□□□□ -0.1
ATG4D-204ENST00000586417 COTL1Q14019 142 aa14.4□□□□□ -0.1
ATG4D-204ENST00000586417 GAGE12JA6NER3 117 aa14.39□□□□□ -0.11
ATG4D-204ENST00000586417 DPM2O94777 84 aa14.39□□□□□ -0.11
ATG4D-204ENST00000586417 GAGE1Q13065 139 aa14.39□□□□□ -0.11
ATG4D-204ENST00000586417 GAGE4Q13068 117 aa14.39□□□□□ -0.11
ATG4D-204ENST00000586417 GAGE5Q13069 117 aa14.39□□□□□ -0.11
ATG4D-204ENST00000586417 GAGE13Q4V321 117 aa14.39□□□□□ -0.11
ATG4D-204ENST00000586417 LOC100131303A0A0U1RQF7 123 aa14.39□□□□□ -0.11
ATG4D-204ENST00000586417 PRSS29PA6NIE9 313 aa14.39□□□□□ -0.11
ATG4D-204ENST00000586417 IGKCP01834 107 aa14.39□□□□□ -0.11
ATG4D-204ENST00000586417 C14orf144Q96I85 54 aa14.39□□□□□ -0.11
ATG4D-204ENST00000586417 HHLA3Q9XRX5 114 aa14.39□□□□□ -0.11
ATG4D-204ENST00000586417 STAB2Q8WWQ8 2551 aa14.39□□□□□ -0.11
ATG4D-204ENST00000586417 F8VRH5 84 aa14.38□□□□□ -0.11
ATG4D-204ENST00000586417 ANKRD39Q53RE8 183 aa14.38□□□□□ -0.11
ATG4D-204ENST00000586417 DAZ4Q86SG3 579 aaKnown RBP14.38□□□□□ -0.11
ATG4D-204ENST00000586417 STPG4Q8N801 248 aa14.38□□□□□ -0.11
ATG4D-204ENST00000586417 DAZ3Q9NR90 486 aaKnown RBP14.38□□□□□ -0.11
ATG4D-204ENST00000586417 UQCR10Q9UDW1 63 aa14.37□□□□□ -0.11
ATG4D-204ENST00000586417 CELA1Q9UNI1 258 aa14.37□□□□□ -0.11
ATG4D-204ENST00000586417 CHTOPQ9Y3Y2 248 aaKnown RBP14.37□□□□□ -0.11
ATG4D-204ENST00000586417 LINC00694P0DN24 101 aa14.37□□□□□ -0.11
ATG4D-204ENST00000586417 ZC2HC1BQ5TFG8 222 aa14.37□□□□□ -0.11
ATG4D-204ENST00000586417 OPRPNQ99935 248 aaPredicted RBP14.37□□□□□ -0.11
ATG4D-204ENST00000586417 PYGO1Q9Y3Y4 419 aa14.37□□□□□ -0.11
ATG4D-204ENST00000586417 TGP01266 2768 aa14.36□□□□□ -0.11
ATG4D-204ENST00000586417 PMVKQ15126 192 aa14.36□□□□□ -0.11
ATG4D-204ENST00000586417 FAM104AQ969W3 186 aa14.36□□□□□ -0.11
ATG4D-204ENST00000586417 IGLV4-3A0A075B6K6 122 aa14.35□□□□□ -0.11
ATG4D-204ENST00000586417 PLNP26678 52 aa14.35□□□□□ -0.11
ATG4D-204ENST00000586417 NTM-AS1Q6ZSK4 140 aa14.35□□□□□ -0.11
ATG4D-204ENST00000586417 PRADC1Q9BSG0 188 aa14.35□□□□□ -0.11
ATG4D-204ENST00000586417 CST9LQ9H4G1 147 aa14.35□□□□□ -0.11
ATG4D-204ENST00000586417 IGKV2D-29A0A075B6S2 120 aaPredicted RBP14.34□□□□□ -0.11
ATG4D-204ENST00000586417 IGKV2-29A2NJV5 120 aaPredicted RBP14.34□□□□□ -0.11
ATG4D-204ENST00000586417 UBE2D4Q9Y2X8 147 aa14.34□□□□□ -0.11
ATG4D-204ENST00000586417 CRYBA4P53673 196 aa14.33□□□□□ -0.12
ATG4D-204ENST00000586417 TP73-AS1Q9UF72 201 aa14.33□□□□□ -0.12
ATG4D-204ENST00000586417 IGLV4-69A0A075B6H9 119 aa14.32□□□□□ -0.12
ATG4D-204ENST00000586417 DAD1P61803 113 aa14.32□□□□□ -0.12
ATG4D-204ENST00000586417 CEMP1Q6PRD7 247 aaPredicted RBP14.32□□□□□ -0.12
ATG4D-204ENST00000586417 A0A0J9YWU9 116 aa14.32□□□□□ -0.12
ATG4D-204ENST00000586417 SPART-AS1P0CW21 52 aa14.32□□□□□ -0.12
ATG4D-204ENST00000586417 GTSF1LQ9H1H1 148 aa14.32□□□□□ -0.12
ATG4D-204ENST00000586417 SPANXA1Q9NS26 97 aa14.32□□□□□ -0.12
ATG4D-204ENST00000586417 NPSP0C0P6 89 aa14.31□□□□□ -0.12
ATG4D-204ENST00000586417 PRO0255Q9UI72 69 aa14.31□□□□□ -0.12
ATG4D-204ENST00000586417 TEX48A0A1B0GUV7 120 aa14.3□□□□□ -0.12
ATG4D-204ENST00000586417 COX8AP10176 69 aa14.3□□□□□ -0.12
ATG4D-204ENST00000586417 TCTAP57738 103 aa14.3□□□□□ -0.12
ATG4D-204ENST00000586417 AMELXQ99217 191 aa14.29□□□□□ -0.12
ATG4D-204ENST00000586417 C11orf68Q9H3H3 251 aaKnown RBP14.29□□□□□ -0.12
ATG4D-204ENST00000586417 NHLRC4P0CG21 123 aaPredicted RBP14.29□□□□□ -0.12
ATG4D-204ENST00000586417 SLC25A34Q6PIV7 304 aa14.29□□□□□ -0.12
ATG4D-204ENST00000586417 TIMM21Q9BVV7 248 aa14.29□□□□□ -0.12
ATG4D-204ENST00000586417 IGKV2D-26A0A0A0MRZ7 120 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 123.4 ms