RNA–Protein interactions for RNA: ENST00000583569.5

NUP85-222, Transcript of nucleoporin 85, human

TSL 5

Gene NUP85, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NUP85-222	ENST00000583569	ERBIN	Q96RT1	1412 aa		0.97	□□□□□ -2.25
NUP85-222	ENST00000583569	FREM3	P0C091	2139 aa		0.97	□□□□□ -2.25
NUP85-222	ENST00000583569	ALPK3	Q96L96	1907 aa		0.96	□□□□□ -2.26
NUP85-222	ENST00000583569		A0A0J9YY99	117 aa		0.96	□□□□□ -2.26
NUP85-222	ENST00000583569	TMEM30CP	A0ZSE6	113 aa		0.96	□□□□□ -2.26
NUP85-222	ENST00000583569		A6NN06	94 aa		0.96	□□□□□ -2.26
NUP85-222	ENST00000583569	TFF1	P04155	84 aa		0.96	□□□□□ -2.26
NUP85-222	ENST00000583569	ADCYAP1	P18509	176 aa		0.96	□□□□□ -2.26
NUP85-222	ENST00000583569	RPL37A	P61513	92 aa	Known RBP	0.96	□□□□□ -2.26
NUP85-222	ENST00000583569	PLGLB1	Q02325	96 aa		0.96	□□□□□ -2.26
NUP85-222	ENST00000583569	CCSMST1	Q4G0I0	132 aa		0.96	□□□□□ -2.26
NUP85-222	ENST00000583569	UNQ5815/PRO19632	Q6UWF5	114 aa		0.96	□□□□□ -2.26
NUP85-222	ENST00000583569	OR10AC1	Q8NH08	325 aa		0.96	□□□□□ -2.26
NUP85-222	ENST00000583569	MRPL36	Q9P0J6	103 aa	Known RBP	0.96	□□□□□ -2.26
NUP85-222	ENST00000583569	NOP16	Q9Y3C1	178 aa	Known RBP	0.96	□□□□□ -2.26
NUP85-222	ENST00000583569	NCOA6	Q14686	2063 aa	Predicted RBP	0.96	□□□□□ -2.26
NUP85-222	ENST00000583569	PKDREJ	Q9NTG1	2253 aa		0.96	□□□□□ -2.26
NUP85-222	ENST00000583569	OVOS2	A0A0J9YW53	1432 aa		0.96	□□□□□ -2.26
NUP85-222	ENST00000583569	OVOS2	Q6IE36	1432 aa		0.96	□□□□□ -2.26
NUP85-222	ENST00000583569	MCM3AP	O60318	1980 aa		0.96	□□□□□ -2.26
NUP85-222	ENST00000583569	TNRC6A	Q8NDV7	1962 aa	Known RBP	0.96	□□□□□ -2.26
NUP85-222	ENST00000583569	GLI2	P10070	1586 aa		0.96	□□□□□ -2.26
NUP85-222	ENST00000583569	STARD9	Q9P2P6	4700 aa		0.95	□□□□□ -2.26
NUP85-222	ENST00000583569		E9PCH4	1651 aa		0.95	□□□□□ -2.26
NUP85-222	ENST00000583569	UNC13C	Q8NB66	2214 aa		0.95	□□□□□ -2.26
NUP85-222	ENST00000583569	IGKV2D-29	A0A075B6S2	120 aa	Predicted RBP	0.95	□□□□□ -2.26
NUP85-222	ENST00000583569	TPST1	O60507	370 aa		0.95	□□□□□ -2.26
NUP85-222	ENST00000583569	POLR2J	P52435	117 aa	Known RBP	0.95	□□□□□ -2.26
NUP85-222	ENST00000583569	EFNA4	P52798	201 aa		0.95	□□□□□ -2.26
NUP85-222	ENST00000583569	RPS25	P62851	125 aa	Known RBP	0.95	□□□□□ -2.26
NUP85-222	ENST00000583569	RHOH	Q15669	191 aa		0.95	□□□□□ -2.26
NUP85-222	ENST00000583569	ASB16-AS1	Q495Z4	193 aa		0.95	□□□□□ -2.26
NUP85-222	ENST00000583569	LYPD5	Q6UWN5	251 aa		0.95	□□□□□ -2.26
NUP85-222	ENST00000583569	SLC25A26	Q70HW3	274 aa		0.95	□□□□□ -2.26
NUP85-222	ENST00000583569		Q86TA4	180 aa		0.95	□□□□□ -2.26
NUP85-222	ENST00000583569	ACACA	Q13085	2346 aa		0.95	□□□□□ -2.26
NUP85-222	ENST00000583569	SSC5D	A1L4H1	1573 aa		0.95	□□□□□ -2.26
NUP85-222	ENST00000583569	ADAMTS12	P58397	1594 aa		0.95	□□□□□ -2.26
NUP85-222	ENST00000583569		A0A0G2JMM0	328 aa		0.94	□□□□□ -2.26
NUP85-222	ENST00000583569	NDUFA2	O43678	99 aa		0.94	□□□□□ -2.26
NUP85-222	ENST00000583569	GYPB	P06028	91 aa		0.94	□□□□□ -2.26
NUP85-222	ENST00000583569	PDE6G	P18545	87 aa		0.94	□□□□□ -2.26
NUP85-222	ENST00000583569	COPZ1	P61923	177 aa		0.94	□□□□□ -2.26
NUP85-222	ENST00000583569	SBSPON	Q8IVN8	264 aa		0.94	□□□□□ -2.26
NUP85-222	ENST00000583569	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	0.94	□□□□□ -2.26
NUP85-222	ENST00000583569	HUWE1	Q7Z6Z7	4374 aa	Known RBP	0.94	□□□□□ -2.26
NUP85-222	ENST00000583569	PHRF1	Q9P1Y6	1649 aa	Known RBP	0.93	□□□□□ -2.26
NUP85-222	ENST00000583569	CHD3	Q12873	2000 aa	Known RBP	0.93	□□□□□ -2.26
NUP85-222	ENST00000583569	LRRC37A2	A6NM11	1700 aa		0.93	□□□□□ -2.26
NUP85-222	ENST00000583569	PEAK1	Q9H792	1746 aa		0.93	□□□□□ -2.26
NUP85-222	ENST00000583569	TRBV20-1	A0A075B6N2	111 aa		0.93	□□□□□ -2.26
NUP85-222	ENST00000583569	NUPR2	A6NF83	97 aa		0.93	□□□□□ -2.26
NUP85-222	ENST00000583569	NPFF	O15130	113 aa		0.93	□□□□□ -2.26
NUP85-222	ENST00000583569	YPEL1	O60688	119 aa		0.93	□□□□□ -2.26
NUP85-222	ENST00000583569	IGHV3-30	P01768	117 aa		0.93	□□□□□ -2.26
NUP85-222	ENST00000583569	TSPAN19	P0C672	248 aa		0.93	□□□□□ -2.26
NUP85-222	ENST00000583569	IGHV3-30-5	P0DP03	117 aa		0.93	□□□□□ -2.26
NUP85-222	ENST00000583569	MIC13	Q5XKP0	118 aa		0.93	□□□□□ -2.26
NUP85-222	ENST00000583569	ATP6V0E2	Q8NHE4	81 aa		0.93	□□□□□ -2.26
NUP85-222	ENST00000583569	ATG5	Q9H1Y0	275 aa		0.93	□□□□□ -2.26
NUP85-222	ENST00000583569	TAS2R8	Q9NYW2	309 aa		0.93	□□□□□ -2.26
NUP85-222	ENST00000583569	ERG28	Q9UKR5	140 aa		0.93	□□□□□ -2.26
NUP85-222	ENST00000583569	MYH1	P12882	1939 aa		0.93	□□□□□ -2.26
NUP85-222	ENST00000583569	PLEC	Q15149	4684 aa	Known RBP	0.93	□□□□□ -2.26
NUP85-222	ENST00000583569	CFTR	P13569	1480 aa		0.92	□□□□□ -2.26
NUP85-222	ENST00000583569	PTPRD	P23468	1912 aa		0.92	□□□□□ -2.26
NUP85-222	ENST00000583569	LOC101927531	A0A1B0GV80	90 aa		0.92	□□□□□ -2.26
NUP85-222	ENST00000583569	ZNF670-ZNF695	F2Z2N8	137 aa		0.92	□□□□□ -2.26
NUP85-222	ENST00000583569		J3QLW9	94 aa		0.92	□□□□□ -2.26
NUP85-222	ENST00000583569	IGF2	P01344	180 aa		0.92	□□□□□ -2.26
NUP85-222	ENST00000583569	ATP11AUN	Q6ZP68	121 aa		0.92	□□□□□ -2.26
NUP85-222	ENST00000583569	DYNLRB2	Q8TF09	96 aa		0.92	□□□□□ -2.26
NUP85-222	ENST00000583569	PSMG3	Q9BT73	122 aa	Predicted RBP	0.92	□□□□□ -2.26
NUP85-222	ENST00000583569	FAT1	Q14517	4588 aa		0.92	□□□□□ -2.26
NUP85-222	ENST00000583569	KIAA1549L	Q6ZVL6	1849 aa		0.92	□□□□□ -2.26
NUP85-222	ENST00000583569	ABCA8	O94911	1581 aa		0.91	□□□□□ -2.26
NUP85-222	ENST00000583569	ANK1	P16157	1881 aa		0.91	□□□□□ -2.26
NUP85-222	ENST00000583569	TRPM7	Q96QT4	1865 aa		0.91	□□□□□ -2.26
NUP85-222	ENST00000583569	CDK5RAP2	Q96SN8	1893 aa		0.91	□□□□□ -2.26
NUP85-222	ENST00000583569	FAM25A	B3EWG3	89 aa		0.91	□□□□□ -2.26
NUP85-222	ENST00000583569	FAM25C	B3EWG5	89 aa		0.91	□□□□□ -2.26
NUP85-222	ENST00000583569	FAM25G	B3EWG6	89 aa		0.91	□□□□□ -2.26
NUP85-222	ENST00000583569		M0R2P5	195 aa		0.91	□□□□□ -2.26
NUP85-222	ENST00000583569	GNG7	O60262	68 aa		0.91	□□□□□ -2.26
NUP85-222	ENST00000583569	CCK	P06307	115 aa		0.91	□□□□□ -2.26
NUP85-222	ENST00000583569		Q6ZQY7	126 aa		0.91	□□□□□ -2.26
NUP85-222	ENST00000583569	DMAC1	Q96GE9	116 aa		0.91	□□□□□ -2.26
NUP85-222	ENST00000583569	CCL19	Q99731	98 aa		0.91	□□□□□ -2.26
NUP85-222	ENST00000583569	SAR1A	Q9NR31	198 aa		0.91	□□□□□ -2.26
NUP85-222	ENST00000583569	PAIP2B	Q9ULR5	123 aa	Known RBP	0.91	□□□□□ -2.26
NUP85-222	ENST00000583569	PKD1L3	Q7Z443	1732 aa		0.91	□□□□□ -2.26
NUP85-222	ENST00000583569	CPD	O75976	1380 aa		0.91	□□□□□ -2.26
NUP85-222	ENST00000583569	HELZ	P42694	1942 aa	Known RBP	0.91	□□□□□ -2.26
NUP85-222	ENST00000583569	PRG4	Q92954	1404 aa	Predicted RBP	0.9	□□□□□ -2.26
NUP85-222	ENST00000583569	MYO18A	Q92614	2054 aa	Known RBP	0.9	□□□□□ -2.26
NUP85-222	ENST00000583569	TRBV30	A0A0K0K1B3	111 aa		0.9	□□□□□ -2.27
NUP85-222	ENST00000583569	HIGD1C	A8MV81	97 aa		0.9	□□□□□ -2.27
NUP85-222	ENST00000583569	NCR2	O95944	276 aa		0.9	□□□□□ -2.27
NUP85-222	ENST00000583569	SLC25A6	P12236	298 aa		0.9	□□□□□ -2.27
NUP85-222	ENST00000583569	IBTK	Q9P2D0	1353 aa	Predicted RBP	0.9	□□□□□ -2.27

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